RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 XPCQ01831 940 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-219ENST00000520158 UNC5CLQ8IV45 518 aa8.31□□□□□ -1.08
CTNNA1-219ENST00000520158 TNS3Q68CZ2 1445 aa8.3□□□□□ -1.08
CTNNA1-219ENST00000520158 USP32Q8NFA0 1604 aa8.3□□□□□ -1.08
CTNNA1-219ENST00000520158 ZBTB22O15209 634 aa8.3□□□□□ -1.08
CTNNA1-219ENST00000520158 PLSCR2Q9NRY7 297 aa8.3□□□□□ -1.08
CTNNA1-219ENST00000520158 ARHGEF10O15013 1369 aa8.3□□□□□ -1.08
CTNNA1-219ENST00000520158 DCAF11Q8TEB1 546 aa8.29□□□□□ -1.08
CTNNA1-219ENST00000520158 POGKQ9P215 609 aa8.29□□□□□ -1.08
CTNNA1-219ENST00000520158 EIF3AQ14152 1382 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-219ENST00000520158 NWD2Q9ULI1 1742 aa8.29□□□□□ -1.08
CTNNA1-219ENST00000520158 GLI3P10071 1580 aa8.28□□□□□ -1.08
CTNNA1-219ENST00000520158 WASLO00401 505 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-219ENST00000520158 VPS72Q15906 364 aa8.28□□□□□ -1.08
CTNNA1-219ENST00000520158 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
CTNNA1-219ENST00000520158 TRPM3Q9HCF6 1732 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-219ENST00000520158 RALGAPBQ86X10 1494 aa8.27□□□□□ -1.09
CTNNA1-219ENST00000520158 FAM83GA6ND36 823 aa8.27□□□□□ -1.09
CTNNA1-219ENST00000520158 FOXD4L1Q9NU39 408 aa8.27□□□□□ -1.09
CTNNA1-219ENST00000520158 TULP4Q9NRJ4 1543 aa8.27□□□□□ -1.09
CTNNA1-219ENST00000520158 ALS2Q96Q42 1657 aa8.27□□□□□ -1.09
CTNNA1-219ENST00000520158 PRR36Q9H6K5 1346 aa8.27□□□□□ -1.09
CTNNA1-219ENST00000520158 ABCA3Q99758 1704 aa8.26□□□□□ -1.09
CTNNA1-219ENST00000520158 KIAA1210Q9ULL0 1709 aa8.26□□□□□ -1.09
CTNNA1-219ENST00000520158 SAFB2Q14151 953 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTNNA1-219ENST00000520158 KDM2AQ9Y2K7 1162 aa8.26□□□□□ -1.09
CTNNA1-219ENST00000520158 GPRASP1Q5JY77 1395 aa8.25□□□□□ -1.09
CTNNA1-219ENST00000520158 PMFBP1Q8TBY8 1022 aa8.25□□□□□ -1.09
CTNNA1-219ENST00000520158 CABLES1Q8TDN4 633 aa8.25□□□□□ -1.09
CTNNA1-219ENST00000520158 ARHGEF28Q8N1W1 1705 aaKnown RBP8.25□□□□□ -1.09
CTNNA1-219ENST00000520158 BRWD3Q6RI45 1802 aa8.24□□□□□ -1.09
CTNNA1-219ENST00000520158 PLCH1Q4KWH8 1693 aa8.24□□□□□ -1.09
CTNNA1-219ENST00000520158 BLMP54132 1417 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-219ENST00000520158 PLEKHG3A1L390 1219 aa8.24□□□□□ -1.09
CTNNA1-219ENST00000520158 EIF5BO60841 1220 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-219ENST00000520158 HIRIP3Q9BW71 556 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-219ENST00000520158 MINK1Q8N4C8 1332 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-219ENST00000520158 POLR3AO14802 1390 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 CRYBG1Q9Y4K1 1723 aa8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 COL14A1Q05707 1796 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 SEPT12Q8IYM1 358 aa8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 NUDT16Q96DE0 195 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 CCDC61Q9Y6R9 512 aa8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 ATP7BP35670 1465 aa8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 EP400Q96L91 3159 aa8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 ITSN1Q15811 1721 aa8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 NRAPQ86VF7 1730 aa8.23□□□□□ -1.09
CTNNA1-219ENST00000520158 HAP1P54257 671 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-219ENST00000520158 CDK19Q9BWU1 502 aa8.22□□□□□ -1.09
CTNNA1-219ENST00000520158 ZRANB1Q9UGI0 708 aa8.22□□□□□ -1.09
CTNNA1-219ENST00000520158 NBPF8Q3BBV2 869 aa8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 LMOD2Q6P5Q4 547 aa8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 KRT27Q7Z3Y8 459 aa8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 NGDNQ8NEJ9 315 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 BTG4Q9NY30 223 aa8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 SPATA31A5Q5VU36 1347 aa8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 SPATA31A7Q8IWB4 1347 aa8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 BRD4O60885 1362 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 TOPAZ1Q8N9V7 1692 aa8.21□□□□□ -1.1
CTNNA1-219ENST00000520158 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
CTNNA1-219ENST00000520158 ARXQ96QS3 562 aa8.2□□□□□ -1.1
CTNNA1-219ENST00000520158 BCL11AQ9H165 835 aa8.19□□□□□ -1.1
CTNNA1-219ENST00000520158 ACEP12821 1306 aa8.19□□□□□ -1.1
CTNNA1-219ENST00000520158 GABBR2O75899 941 aa8.18□□□□□ -1.1
CTNNA1-219ENST00000520158 CPDO75976 1380 aa8.18□□□□□ -1.1
CTNNA1-219ENST00000520158 THSD7AQ9UPZ6 1657 aa8.18□□□□□ -1.1
CTNNA1-219ENST00000520158 PAK3O75914 559 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 SF3B2Q13435 895 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 FAM98CQ17RN3 349 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 BARGINQ6ZT62 677 aa8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 DEFB132Q7Z7B7 95 aa8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 PRDM11Q9NQV5 511 aa8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 CCDC9Q9Y3X0 531 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 USP19O94966 1318 aa8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 SPATA31A1Q5TZJ5 1347 aa8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 CENPJQ9HC77 1338 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 KIAA0232Q92628 1395 aa8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 PHRF1Q9P1Y6 1649 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-219ENST00000520158 C19orf67A6NJJ6 358 aa8.16□□□□□ -1.1
CTNNA1-219ENST00000520158 DISP2A7MBM2 1401 aa8.16□□□□□ -1.1
CTNNA1-219ENST00000520158 NLRP13Q86W25 1043 aa8.16□□□□□ -1.1
CTNNA1-219ENST00000520158 L3MBTL2Q969R5 705 aa8.16□□□□□ -1.1
CTNNA1-219ENST00000520158 ZBTB12Q9Y330 459 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-219ENST00000520158 LMO7Q8WWI1 1683 aa8.15□□□□□ -1.1
CTNNA1-219ENST00000520158 SSH2Q76I76 1423 aa8.15□□□□□ -1.1
CTNNA1-219ENST00000520158 BAG6P46379 1132 aa8.15□□□□□ -1.1
CTNNA1-219ENST00000520158 ABTB2Q8N961 1025 aa8.15□□□□□ -1.1
CTNNA1-219ENST00000520158 RTN4Q9NQC3 1192 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-219ENST00000520158 THRAP3Q9Y2W1 955 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-219ENST00000520158 CAMTA1Q9Y6Y1 1673 aa8.14□□□□□ -1.11
CTNNA1-219ENST00000520158 PPIP5K1Q6PFW1 1433 aa8.14□□□□□ -1.11
CTNNA1-219ENST00000520158 PLEKHG5O94827 1062 aa8.14□□□□□ -1.11
CTNNA1-219ENST00000520158 GCP02774 474 aa8.14□□□□□ -1.11
CTNNA1-219ENST00000520158 ZC3H6P61129 1189 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-219ENST00000520158 FAM196AQ6ZSG2 479 aa8.14□□□□□ -1.11
CTNNA1-219ENST00000520158 RGPD1P0DJD0 1748 aa8.14□□□□□ -1.11
CTNNA1-219ENST00000520158 NRKQ7Z2Y5 1582 aa8.14□□□□□ -1.11
CTNNA1-219ENST00000520158 USP6P35125 1406 aa8.13□□□□□ -1.11
CTNNA1-219ENST00000520158 SRPK2P78362 688 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-219ENST00000520158 CHRNA2Q15822 529 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms