RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 NAIPQ13075 1403 aa7.28□□□□□ -1.24
SDC2-204ENST00000519914 PTPRKQ15262 1439 aa7.28□□□□□ -1.24
SDC2-204ENST00000519914 DAXXQ9UER7 740 aaPredicted RBP7.27□□□□□ -1.24
SDC2-204ENST00000519914 DISP1Q96F81 1524 aa7.27□□□□□ -1.25
SDC2-204ENST00000519914 MAGI1Q96QZ7 1491 aaPredicted RBP7.27□□□□□ -1.25
SDC2-204ENST00000519914 EIF4G3O43432 1585 aaKnown RBP7.27□□□□□ -1.25
SDC2-204ENST00000519914 FAM187AA6NFU0 413 aa7.27□□□□□ -1.25
SDC2-204ENST00000519914 FUT2Q10981 343 aa7.27□□□□□ -1.25
SDC2-204ENST00000519914 FOXC1Q12948 553 aa7.27□□□□□ -1.25
SDC2-204ENST00000519914 ERICH6Q7L0X2 663 aa7.27□□□□□ -1.25
SDC2-204ENST00000519914 ADCY10Q96PN6 1610 aa7.26□□□□□ -1.25
SDC2-204ENST00000519914 GPR37O15354 613 aa7.26□□□□□ -1.25
SDC2-204ENST00000519914 GRIN2AQ12879 1464 aa7.25□□□□□ -1.25
SDC2-204ENST00000519914 KDM5BQ9UGL1 1544 aa7.25□□□□□ -1.25
SDC2-204ENST00000519914 ZNF608Q9ULD9 1512 aaPredicted RBP7.25□□□□□ -1.25
SDC2-204ENST00000519914 RAPGEF6Q8TEU7 1601 aa7.25□□□□□ -1.25
SDC2-204ENST00000519914 FAM50AQ14320 339 aaKnown RBP7.25□□□□□ -1.25
SDC2-204ENST00000519914 MORN1Q5T089 497 aa7.25□□□□□ -1.25
SDC2-204ENST00000519914 PHOX2BQ99453 314 aa7.25□□□□□ -1.25
SDC2-204ENST00000519914 ROCK1Q13464 1354 aa7.24□□□□□ -1.25
SDC2-204ENST00000519914 GDF9O60383 454 aa7.24□□□□□ -1.25
SDC2-204ENST00000519914 DGAT1O75907 488 aa7.24□□□□□ -1.25
SDC2-204ENST00000519914 GPIHBP1Q8IV16 184 aa7.24□□□□□ -1.25
SDC2-204ENST00000519914 SLC27A5Q9Y2P5 690 aa7.24□□□□□ -1.25
SDC2-204ENST00000519914 DNMT1P26358 1616 aaKnown RBP7.23□□□□□ -1.25
SDC2-204ENST00000519914 POTECB2RU33 542 aa7.23□□□□□ -1.25
SDC2-204ENST00000519914 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
SDC2-204ENST00000519914 ATP6V1AP38606 617 aa7.23□□□□□ -1.25
SDC2-204ENST00000519914 PRR20EP86478 221 aa7.23□□□□□ -1.25
SDC2-204ENST00000519914 PRR20CP86479 221 aa7.23□□□□□ -1.25
SDC2-204ENST00000519914 PRR20DP86480 221 aa7.23□□□□□ -1.25
SDC2-204ENST00000519914 PRR20BP86481 221 aa7.23□□□□□ -1.25
SDC2-204ENST00000519914 PRR20AP86496 221 aa7.23□□□□□ -1.25
SDC2-204ENST00000519914 ZNF775Q96BV0 537 aaPredicted RBP7.23□□□□□ -1.25
SDC2-204ENST00000519914 GTF3C3Q9Y5Q9 886 aa7.23□□□□□ -1.25
SDC2-204ENST00000519914 NUP160Q12769 1436 aa7.22□□□□□ -1.25
SDC2-204ENST00000519914 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
SDC2-204ENST00000519914 NUP153P49790 1475 aaKnown RBP7.22□□□□□ -1.25
SDC2-204ENST00000519914 FMNL1O95466 1100 aaPredicted RBP7.22□□□□□ -1.25
SDC2-204ENST00000519914 ITGAEP38570 1179 aa7.22□□□□□ -1.25
SDC2-204ENST00000519914 GCGRP47871 477 aa7.22□□□□□ -1.25
SDC2-204ENST00000519914 FCF1Q9Y324 198 aaKnown RBP7.22□□□□□ -1.25
SDC2-204ENST00000519914 CDK13Q14004 1512 aaKnown RBP7.22□□□□□ -1.25
SDC2-204ENST00000519914 ITSN2Q9NZM3 1697 aa7.21□□□□□ -1.25
SDC2-204ENST00000519914 CEP170Q5SW79 1584 aa7.21□□□□□ -1.25
SDC2-204ENST00000519914 DENND4BO75064 1496 aaPredicted RBP7.21□□□□□ -1.25
SDC2-204ENST00000519914 SULF1Q8IWU6 871 aa7.21□□□□□ -1.26
SDC2-204ENST00000519914 FAM160A2Q8N612 972 aaPredicted RBP7.21□□□□□ -1.26
SDC2-204ENST00000519914 THAP11Q96EK4 314 aa7.21□□□□□ -1.26
SDC2-204ENST00000519914 PRDM9Q9NQV7 894 aa7.21□□□□□ -1.26
SDC2-204ENST00000519914 KDM2AQ9Y2K7 1162 aa7.21□□□□□ -1.26
SDC2-204ENST00000519914 ST8SIA5O15466 376 aa7.2□□□□□ -1.26
SDC2-204ENST00000519914 ADGBQ8N7X0 1667 aa7.19□□□□□ -1.26
SDC2-204ENST00000519914 TROQ12816 1431 aaPredicted RBP7.19□□□□□ -1.26
SDC2-204ENST00000519914 SIN3AQ96ST3 1273 aa7.19□□□□□ -1.26
SDC2-204ENST00000519914 PKD2L1Q9P0L9 805 aa7.19□□□□□ -1.26
SDC2-204ENST00000519914 ATP1B4Q9UN42 357 aaPredicted RBP7.19□□□□□ -1.26
SDC2-204ENST00000519914 ADGRL2O95490 1459 aa7.19□□□□□ -1.26
SDC2-204ENST00000519914 CROCC2H7BZ55 1655 aa7.19□□□□□ -1.26
SDC2-204ENST00000519914 ABCA8O94911 1581 aa7.18□□□□□ -1.26
SDC2-204ENST00000519914 DAPK1P53355 1430 aa7.18□□□□□ -1.26
SDC2-204ENST00000519914 KDM6BO15054 1643 aa7.18□□□□□ -1.26
SDC2-204ENST00000519914 CD2BP2O95400 341 aaKnown RBP7.18□□□□□ -1.26
SDC2-204ENST00000519914 RNF19BQ6ZMZ0 732 aa7.18□□□□□ -1.26
SDC2-204ENST00000519914 ABCC5O15440 1437 aa7.17□□□□□ -1.26
SDC2-204ENST00000519914 RPIAP49247 311 aa7.17□□□□□ -1.26
SDC2-204ENST00000519914 BRICD5Q6PL45 260 aa7.17□□□□□ -1.26
SDC2-204ENST00000519914 TONSLQ96HA7 1378 aa7.17□□□□□ -1.26
SDC2-204ENST00000519914 CCER2I3L3R5 266 aa7.16□□□□□ -1.26
SDC2-204ENST00000519914 ZBTB24O43167 697 aaPredicted RBP7.16□□□□□ -1.26
SDC2-204ENST00000519914 GRIPAP1Q4V328 841 aa7.16□□□□□ -1.26
SDC2-204ENST00000519914 CYP4X1Q8N118 509 aa7.16□□□□□ -1.26
SDC2-204ENST00000519914 AAASQ9NRG9 546 aa7.16□□□□□ -1.26
SDC2-204ENST00000519914 ERCC6Q03468 1493 aa7.15□□□□□ -1.26
SDC2-204ENST00000519914 SHANK2Q9UPX8 1470 aa7.15□□□□□ -1.26
SDC2-204ENST00000519914 POLR1AO95602 1720 aaPredicted RBP7.15□□□□□ -1.27
SDC2-204ENST00000519914 CARMIL2Q6F5E8 1435 aa7.15□□□□□ -1.27
SDC2-204ENST00000519914 GPATCH8Q9UKJ3 1502 aaKnown RBP7.14□□□□□ -1.27
SDC2-204ENST00000519914 MDM2Q00987 491 aaPredicted RBP7.14□□□□□ -1.27
SDC2-204ENST00000519914 DACH1Q9UI36 760 aa7.14□□□□□ -1.27
SDC2-204ENST00000519914 CDK11AQ9UQ88 783 aaPredicted RBP7.14□□□□□ -1.27
SDC2-204ENST00000519914 CAMSAP2Q08AD1 1489 aa7.14□□□□□ -1.27
SDC2-204ENST00000519914 ABCC10Q5T3U5 1492 aa7.14□□□□□ -1.27
SDC2-204ENST00000519914 RPRD2Q5VT52 1461 aaKnown RBP7.14□□□□□ -1.27
SDC2-204ENST00000519914 CDC42BPAQ5VT25 1732 aa7.13□□□□□ -1.27
SDC2-204ENST00000519914 HLA-CQ95604 372 aa7.13□□□□□ -1.27
SDC2-204ENST00000519914 SALL2Q9Y467 1007 aaPredicted RBP7.13□□□□□ -1.27
SDC2-204ENST00000519914 ANKRD30BQ9BXX2 1392 aa7.13□□□□□ -1.27
SDC2-204ENST00000519914 TEX14Q8IWB6 1497 aa7.13□□□□□ -1.27
SDC2-204ENST00000519914 KDM5DQ9BY66 1539 aa7.13□□□□□ -1.27
SDC2-204ENST00000519914 TTC24A2A3L6 582 aaPredicted RBP7.12□□□□□ -1.27
SDC2-204ENST00000519914 CD46P15529 392 aa7.12□□□□□ -1.27
SDC2-204ENST00000519914 MAP2K5Q13163 448 aa7.12□□□□□ -1.27
SDC2-204ENST00000519914 CCDC24Q8N4L8 307 aa7.12□□□□□ -1.27
SDC2-204ENST00000519914 YTHDC1Q96MU7 727 aaKnown RBP7.12□□□□□ -1.27
SDC2-204ENST00000519914 ARHGEF5Q12774 1597 aa7.12□□□□□ -1.27
SDC2-204ENST00000519914 SHROOM2Q13796 1616 aa7.12□□□□□ -1.27
SDC2-204ENST00000519914 KIF14Q15058 1648 aa7.12□□□□□ -1.27
SDC2-204ENST00000519914 PZPP20742 1482 aa7.11□□□□□ -1.27
SDC2-204ENST00000519914 PLB1Q6P1J6 1458 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms