RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 STK26Q9P289 416 aa12.96□□□□□ -0.33
PABPC1-213ENST00000519848 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
PABPC1-213ENST00000519848 ADGRB2O60241 1585 aa12.95□□□□□ -0.34
PABPC1-213ENST00000519848 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
PABPC1-213ENST00000519848 ARHGEF28Q8N1W1 1705 aaKnown RBP12.94□□□□□ -0.34
PABPC1-213ENST00000519848 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
PABPC1-213ENST00000519848 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
PABPC1-213ENST00000519848 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-213ENST00000519848 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
PABPC1-213ENST00000519848 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
PABPC1-213ENST00000519848 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
PABPC1-213ENST00000519848 DLC1Q96QB1 1528 aa12.92□□□□□ -0.34
PABPC1-213ENST00000519848 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-213ENST00000519848 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
PABPC1-213ENST00000519848 GLI3P10071 1580 aa12.9□□□□□ -0.34
PABPC1-213ENST00000519848 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
PABPC1-213ENST00000519848 C8orf37Q96NL8 207 aa12.9□□□□□ -0.34
PABPC1-213ENST00000519848 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
PABPC1-213ENST00000519848 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
PABPC1-213ENST00000519848 LRRC59Q96AG4 307 aaKnown RBP12.89□□□□□ -0.35
PABPC1-213ENST00000519848 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
PABPC1-213ENST00000519848 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
PABPC1-213ENST00000519848 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
PABPC1-213ENST00000519848 ATRNO75882 1429 aa12.88□□□□□ -0.35
PABPC1-213ENST00000519848 FOXO3O43524 673 aa12.88□□□□□ -0.35
PABPC1-213ENST00000519848 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
PABPC1-213ENST00000519848 SAFB2Q14151 953 aaKnown RBP eCLIP12.87□□□□□ -0.35
PABPC1-213ENST00000519848 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
PABPC1-213ENST00000519848 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
PABPC1-213ENST00000519848 NRAPQ86VF7 1730 aa12.86□□□□□ -0.35
PABPC1-213ENST00000519848 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-213ENST00000519848 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-213ENST00000519848 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
PABPC1-213ENST00000519848 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
PABPC1-213ENST00000519848 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
PABPC1-213ENST00000519848 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
PABPC1-213ENST00000519848 SLIT2O94813 1529 aa12.84□□□□□ -0.35
PABPC1-213ENST00000519848 SPATA31A3Q5VYP0 1347 aa12.84□□□□□ -0.35
PABPC1-213ENST00000519848 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
PABPC1-213ENST00000519848 TULP4Q9NRJ4 1543 aa12.83□□□□□ -0.35
PABPC1-213ENST00000519848 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
PABPC1-213ENST00000519848 RXRBP28702 533 aa12.83□□□□□ -0.36
PABPC1-213ENST00000519848 ATP7BP35670 1465 aa12.83□□□□□ -0.36
PABPC1-213ENST00000519848 FNBP4Q8N3X1 1017 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-213ENST00000519848 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-213ENST00000519848 QTRT2Q9H974 415 aaKnown RBP12.82□□□□□ -0.36
PABPC1-213ENST00000519848 EP400Q96L91 3159 aa12.82□□□□□ -0.36
PABPC1-213ENST00000519848 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
PABPC1-213ENST00000519848 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
PABPC1-213ENST00000519848 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
PABPC1-213ENST00000519848 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
PABPC1-213ENST00000519848 KIAA1210Q9ULL0 1709 aa12.8□□□□□ -0.36
PABPC1-213ENST00000519848 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
PABPC1-213ENST00000519848 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
PABPC1-213ENST00000519848 TRAK1Q9UPV9 953 aa12.8□□□□□ -0.36
PABPC1-213ENST00000519848 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-213ENST00000519848 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
PABPC1-213ENST00000519848 RALGAPBQ86X10 1494 aa12.79□□□□□ -0.36
PABPC1-213ENST00000519848 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
PABPC1-213ENST00000519848 DCAF11Q8TEB1 546 aa12.79□□□□□ -0.36
PABPC1-213ENST00000519848 USP21Q9UK80 565 aa12.79□□□□□ -0.36
PABPC1-213ENST00000519848 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
PABPC1-213ENST00000519848 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
PABPC1-213ENST00000519848 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
PABPC1-213ENST00000519848 PMFBP1Q8TBY8 1022 aa12.78□□□□□ -0.36
PABPC1-213ENST00000519848 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
PABPC1-213ENST00000519848 ITSN1Q15811 1721 aa12.77□□□□□ -0.36
PABPC1-213ENST00000519848 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
PABPC1-213ENST00000519848 QRICH2Q9H0J4 1663 aa12.76□□□□□ -0.37
PABPC1-213ENST00000519848 NBPF1Q3BBV0 1214 aa12.75□□□□□ -0.37
PABPC1-213ENST00000519848 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
PABPC1-213ENST00000519848 TRPM1Q7Z4N2 1603 aa12.75□□□□□ -0.37
PABPC1-213ENST00000519848 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
PABPC1-213ENST00000519848 CCDC61Q9Y6R9 512 aa12.74□□□□□ -0.37
PABPC1-213ENST00000519848 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
PABPC1-213ENST00000519848 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
PABPC1-213ENST00000519848 TRPC5Q9UL62 973 aaPredicted RBP12.73□□□□□ -0.37
PABPC1-213ENST00000519848 TRPC6Q9Y210 931 aa12.73□□□□□ -0.37
PABPC1-213ENST00000519848 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
PABPC1-213ENST00000519848 COL14A1Q05707 1796 aaKnown RBP12.72□□□□□ -0.37
PABPC1-213ENST00000519848 HRCP23327 699 aa12.72□□□□□ -0.37
PABPC1-213ENST00000519848 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
PABPC1-213ENST00000519848 WASLO00401 505 aaPredicted RBP12.71□□□□□ -0.37
PABPC1-213ENST00000519848 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
PABPC1-213ENST00000519848 POGKQ9P215 609 aa12.71□□□□□ -0.37
PABPC1-213ENST00000519848 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
PABPC1-213ENST00000519848 FAM83GA6ND36 823 aa12.7□□□□□ -0.38
PABPC1-213ENST00000519848 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
PABPC1-213ENST00000519848 UNC5CLQ8IV45 518 aa12.69□□□□□ -0.38
PABPC1-213ENST00000519848 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
PABPC1-213ENST00000519848 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
PABPC1-213ENST00000519848 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
PABPC1-213ENST00000519848 POLR3AO14802 1390 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-213ENST00000519848 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
PABPC1-213ENST00000519848 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
PABPC1-213ENST00000519848 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
PABPC1-213ENST00000519848 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-213ENST00000519848 CAMTA1Q9Y6Y1 1673 aa12.65□□□□□ -0.38
PABPC1-213ENST00000519848 VPS72Q15906 364 aa12.65□□□□□ -0.38
PABPC1-213ENST00000519848 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms