RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
SPIDR-210ENST00000519362 RRP7AQ9Y3A4 280 aaKnown RBP16.17■□□□□ 0.18
SPIDR-210ENST00000519362 PLEKHF1Q96S99 279 aa16.17■□□□□ 0.18
SPIDR-210ENST00000519362 CCDC61Q9Y6R9 512 aa16.17■□□□□ 0.18
SPIDR-210ENST00000519362 MON2Q7Z3U7 1717 aa16.16■□□□□ 0.18
SPIDR-210ENST00000519362 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
SPIDR-210ENST00000519362 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-210ENST00000519362 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPIDR-210ENST00000519362 AKAP12Q02952 1782 aa16.14■□□□□ 0.17
SPIDR-210ENST00000519362 EID1Q9Y6B2 187 aa16.14■□□□□ 0.17
SPIDR-210ENST00000519362 PRR36Q9H6K5 1346 aa16.13■□□□□ 0.17
SPIDR-210ENST00000519362 FANCIQ9NVI1 1328 aa16.13■□□□□ 0.17
SPIDR-210ENST00000519362 PTPRUQ92729 1446 aa16.13■□□□□ 0.17
SPIDR-210ENST00000519362 DIAPH1O60610 1272 aaKnown RBP16.13■□□□□ 0.17
SPIDR-210ENST00000519362 U2SURPO15042 1029 aaKnown RBP16.12■□□□□ 0.17
SPIDR-210ENST00000519362 BCAR3O75815 825 aa16.12■□□□□ 0.17
SPIDR-210ENST00000519362 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
SPIDR-210ENST00000519362 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
SPIDR-210ENST00000519362 ITSN1Q15811 1721 aa16.12■□□□□ 0.17
SPIDR-210ENST00000519362 TOPAZ1Q8N9V7 1692 aa16.11■□□□□ 0.17
SPIDR-210ENST00000519362 KDM4FA0A1W2PPD8 638 aa16.11■□□□□ 0.17
SPIDR-210ENST00000519362 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
SPIDR-210ENST00000519362 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
SPIDR-210ENST00000519362 TBX22Q9Y458 520 aa16.1■□□□□ 0.17
SPIDR-210ENST00000519362 TMPOP42166 694 aaKnown RBP16.1■□□□□ 0.17
SPIDR-210ENST00000519362 NME9Q86XW9 330 aa16.1■□□□□ 0.17
SPIDR-210ENST00000519362 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
SPIDR-210ENST00000519362 SLC26A8Q96RN1 970 aa16.1■□□□□ 0.17
SPIDR-210ENST00000519362 DIP2AQ14689 1571 aa16.1■□□□□ 0.17
SPIDR-210ENST00000519362 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
SPIDR-210ENST00000519362 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
SPIDR-210ENST00000519362 FBLN1P23142 703 aa16.08■□□□□ 0.17
SPIDR-210ENST00000519362 PNNQ9H307 717 aaKnown RBP16.08■□□□□ 0.17
SPIDR-210ENST00000519362 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.17
SPIDR-210ENST00000519362 KDM2BQ8NHM5 1336 aa16.08■□□□□ 0.16
SPIDR-210ENST00000519362 NRKQ7Z2Y5 1582 aa16.08■□□□□ 0.16
SPIDR-210ENST00000519362 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
SPIDR-210ENST00000519362 TRIM35Q9UPQ4 493 aa16.08■□□□□ 0.16
SPIDR-210ENST00000519362 MAPK8IP3Q9UPT6 1336 aa16.07■□□□□ 0.16
SPIDR-210ENST00000519362 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
SPIDR-210ENST00000519362 PLEKHG3A1L390 1219 aa16.07■□□□□ 0.16
SPIDR-210ENST00000519362 FCHSD2O94868 740 aa16.07■□□□□ 0.16
SPIDR-210ENST00000519362 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
SPIDR-210ENST00000519362 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
SPIDR-210ENST00000519362 RARSP54136 660 aaKnown RBP16.06■□□□□ 0.16
SPIDR-210ENST00000519362 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
SPIDR-210ENST00000519362 AMOTL2Q9Y2J4 779 aa16.06■□□□□ 0.16
SPIDR-210ENST00000519362 COG3Q96JB2 828 aa16.05■□□□□ 0.16
SPIDR-210ENST00000519362 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
SPIDR-210ENST00000519362 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
SPIDR-210ENST00000519362 EMILIN1Q9Y6C2 1016 aa16.05■□□□□ 0.16
SPIDR-210ENST00000519362 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-210ENST00000519362 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
SPIDR-210ENST00000519362 IL16Q14005 1332 aa16.04■□□□□ 0.16
SPIDR-210ENST00000519362 PPM1GO15355 546 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-210ENST00000519362 IL13P35225 146 aa16.03■□□□□ 0.16
SPIDR-210ENST00000519362 CENPQQ7L2Z9 268 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-210ENST00000519362 ACEP12821 1306 aa16.03■□□□□ 0.16
SPIDR-210ENST00000519362 TTC21BQ7Z4L5 1316 aa16.03■□□□□ 0.16
SPIDR-210ENST00000519362 CT47B1P0C2W7 299 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-210ENST00000519362 MS4A1P11836 297 aa16.03■□□□□ 0.16
SPIDR-210ENST00000519362 USP6P35125 1406 aa16.02■□□□□ 0.16
SPIDR-210ENST00000519362 RIPK4P57078 832 aa16.02■□□□□ 0.16
SPIDR-210ENST00000519362 OVOS2A0A0J9YW53 1432 aa16.01■□□□□ 0.15
SPIDR-210ENST00000519362 OVOS2Q6IE36 1432 aa16.01■□□□□ 0.15
SPIDR-210ENST00000519362 SSH2Q76I76 1423 aa16.01■□□□□ 0.15
SPIDR-210ENST00000519362 MSH5O43196 834 aa16.01■□□□□ 0.15
SPIDR-210ENST00000519362 PRKAR2BP31323 418 aa16.01■□□□□ 0.15
SPIDR-210ENST00000519362 RIMS1Q86UR5 1692 aaKnown RBP16■□□□□ 0.15
SPIDR-210ENST00000519362 PIK3R4Q99570 1358 aa16■□□□□ 0.15
SPIDR-210ENST00000519362 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
SPIDR-210ENST00000519362 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
SPIDR-210ENST00000519362 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
SPIDR-210ENST00000519362 RRS1Q15050 365 aaKnown RBP15.98■□□□□ 0.15
SPIDR-210ENST00000519362 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
SPIDR-210ENST00000519362 NUTM2FA1L443 756 aa15.98■□□□□ 0.15
SPIDR-210ENST00000519362 USP31Q70CQ4 1352 aa15.98■□□□□ 0.15
SPIDR-210ENST00000519362 EXOSC9Q06265 439 aaKnown RBP15.97■□□□□ 0.15
SPIDR-210ENST00000519362 NFE2L2Q16236 605 aa15.97■□□□□ 0.15
SPIDR-210ENST00000519362 FRAT1Q92837 279 aaPredicted RBP15.97■□□□□ 0.15
SPIDR-210ENST00000519362 PHACTR3Q96KR7 559 aa15.97■□□□□ 0.15
SPIDR-210ENST00000519362 ZNF142P52746 1687 aaPredicted RBP15.97■□□□□ 0.15
SPIDR-210ENST00000519362 ADAMTSL3P82987 1691 aa15.96■□□□□ 0.15
SPIDR-210ENST00000519362 NEFMP07197 916 aa15.96■□□□□ 0.15
SPIDR-210ENST00000519362 HMOX1P09601 288 aa15.96■□□□□ 0.15
SPIDR-210ENST00000519362 COG6Q9Y2V7 657 aa15.96■□□□□ 0.15
SPIDR-210ENST00000519362 AAMPQ13685 434 aa15.96■□□□□ 0.14
SPIDR-210ENST00000519362 CLUAP1Q96AJ1 413 aa15.96■□□□□ 0.14
SPIDR-210ENST00000519362 TTC21AQ8NDW8 1320 aa15.95■□□□□ 0.14
SPIDR-210ENST00000519362 PDE4AP27815 886 aa15.95■□□□□ 0.14
SPIDR-210ENST00000519362 BCL2L13Q9BXK5 485 aa15.95■□□□□ 0.14
SPIDR-210ENST00000519362 ANKARQ7Z5J8 1434 aa15.95■□□□□ 0.14
SPIDR-210ENST00000519362 RLBP1P12271 317 aa15.94■□□□□ 0.14
SPIDR-210ENST00000519362 KCNA6P17658 529 aa15.94■□□□□ 0.14
SPIDR-210ENST00000519362 SKAP1Q86WV1 359 aa15.94■□□□□ 0.14
SPIDR-210ENST00000519362 BACH2Q9BYV9 841 aa15.94■□□□□ 0.14
SPIDR-210ENST00000519362 RGPD8O14715 1765 aaPredicted RBP15.94■□□□□ 0.14
SPIDR-210ENST00000519362 PEAK1Q9H792 1746 aa15.93■□□□□ 0.14
SPIDR-210ENST00000519362 TNNQ9UQP3 1299 aa15.93■□□□□ 0.14
SPIDR-210ENST00000519362 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms