RNA–Protein interactions for RNA: ENST00000519245.1

LAMA4-212, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-212ENST00000519245 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
LAMA4-212ENST00000519245 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
LAMA4-212ENST00000519245 SOBPA7XYQ1 873 aa10.52□□□□□ -0.73
LAMA4-212ENST00000519245 NNTQ13423 1086 aa10.52□□□□□ -0.73
LAMA4-212ENST00000519245 WIZO95785 1651 aa10.52□□□□□ -0.73
LAMA4-212ENST00000519245 TIMP2P16035 220 aa10.51□□□□□ -0.73
LAMA4-212ENST00000519245 SUZ12Q15022 739 aaKnown RBP10.51□□□□□ -0.73
LAMA4-212ENST00000519245 BAP1Q92560 729 aa10.51□□□□□ -0.73
LAMA4-212ENST00000519245 PURBQ96QR8 312 aaKnown RBP10.51□□□□□ -0.73
LAMA4-212ENST00000519245 GPCPD1Q9NPB8 672 aa10.51□□□□□ -0.73
LAMA4-212ENST00000519245 FDX1P10109 184 aa10.5□□□□□ -0.73
LAMA4-212ENST00000519245 PTPRNQ16849 979 aa10.5□□□□□ -0.73
LAMA4-212ENST00000519245 MPNDQ8N594 471 aa10.5□□□□□ -0.73
LAMA4-212ENST00000519245 CCDC102AQ96A19 550 aa10.5□□□□□ -0.73
LAMA4-212ENST00000519245 EVA1BQ9NVM1 165 aa10.5□□□□□ -0.73
LAMA4-212ENST00000519245 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
LAMA4-212ENST00000519245 C6orf229H3BNL8 230 aa10.49□□□□□ -0.73
LAMA4-212ENST00000519245 GSK3AP49840 483 aa10.49□□□□□ -0.73
LAMA4-212ENST00000519245 NUTM1Q86Y26 1132 aa10.49□□□□□ -0.73
LAMA4-212ENST00000519245 ZNF511Q8NB15 262 aa10.49□□□□□ -0.73
LAMA4-212ENST00000519245 KLF16Q9BXK1 252 aaPredicted RBP10.49□□□□□ -0.73
LAMA4-212ENST00000519245 VARSP26640 1264 aaKnown RBP10.48□□□□□ -0.73
LAMA4-212ENST00000519245 ADH1CP00326 375 aa10.47□□□□□ -0.73
LAMA4-212ENST00000519245 CLCN1P35523 988 aa10.47□□□□□ -0.73
LAMA4-212ENST00000519245 SCARF1Q14162 830 aa10.47□□□□□ -0.73
LAMA4-212ENST00000519245 PLEKHG3A1L390 1219 aa10.46□□□□□ -0.73
LAMA4-212ENST00000519245 WDR4P57081 412 aaKnown RBP10.46□□□□□ -0.73
LAMA4-212ENST00000519245 KCNH2Q12809 1159 aa10.46□□□□□ -0.73
LAMA4-212ENST00000519245 KCNMA1Q12791 1236 aa10.45□□□□□ -0.74
LAMA4-212ENST00000519245 ERCC6Q03468 1493 aa10.44□□□□□ -0.74
LAMA4-212ENST00000519245 KCTD17Q8N5Z5 321 aa10.42□□□□□ -0.74
LAMA4-212ENST00000519245 NDUFV2P19404 249 aa10.41□□□□□ -0.74
LAMA4-212ENST00000519245 PRR7Q8TB68 274 aa10.41□□□□□ -0.74
LAMA4-212ENST00000519245 SPIRE2Q8WWL2 714 aa10.4□□□□□ -0.74
LAMA4-212ENST00000519245 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.74
LAMA4-212ENST00000519245 DESI1Q6ICB0 168 aa10.39□□□□□ -0.75
LAMA4-212ENST00000519245 CDK15Q96Q40 435 aa10.39□□□□□ -0.75
LAMA4-212ENST00000519245 MOXD2PA6NHM9 499 aa10.38□□□□□ -0.75
LAMA4-212ENST00000519245 MAN1A2O60476 641 aa10.38□□□□□ -0.75
LAMA4-212ENST00000519245 PPFIA3O75145 1194 aa10.38□□□□□ -0.75
LAMA4-212ENST00000519245 ZIC2O95409 532 aaPredicted RBP10.38□□□□□ -0.75
LAMA4-212ENST00000519245 FAM174AQ8TBP5 190 aa10.38□□□□□ -0.75
LAMA4-212ENST00000519245 ITPKCQ96DU7 683 aa10.38□□□□□ -0.75
LAMA4-212ENST00000519245 LAMC3Q9Y6N6 1575 aa10.38□□□□□ -0.75
LAMA4-212ENST00000519245 CUX2O14529 1486 aa10.37□□□□□ -0.75
LAMA4-212ENST00000519245 NR3C2P08235 984 aa10.37□□□□□ -0.75
LAMA4-212ENST00000519245 C6orf118Q5T5N4 469 aa10.37□□□□□ -0.75
LAMA4-212ENST00000519245 KIF21AQ7Z4S6 1674 aa10.37□□□□□ -0.75
LAMA4-212ENST00000519245 CADPSQ9ULU8 1353 aa10.37□□□□□ -0.75
LAMA4-212ENST00000519245 FOXJ1Q92949 421 aa10.36□□□□□ -0.75
LAMA4-212ENST00000519245 KRT76Q01546 638 aa10.35□□□□□ -0.75
LAMA4-212ENST00000519245 MTMR2Q13614 643 aa10.35□□□□□ -0.75
LAMA4-212ENST00000519245 THOC2Q8NI27 1593 aaKnown RBP10.35□□□□□ -0.75
LAMA4-212ENST00000519245 SSTR3P32745 418 aaPredicted RBP10.34□□□□□ -0.75
LAMA4-212ENST00000519245 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
LAMA4-212ENST00000519245 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
LAMA4-212ENST00000519245 KRI1Q8N9T8 703 aaKnown RBP10.33□□□□□ -0.76
LAMA4-212ENST00000519245 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
LAMA4-212ENST00000519245 GRM5P41594 1212 aa10.32□□□□□ -0.76
LAMA4-212ENST00000519245 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
LAMA4-212ENST00000519245 LYPD8Q6UX82 237 aa10.32□□□□□ -0.76
LAMA4-212ENST00000519245 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
LAMA4-212ENST00000519245 PDS5BQ9NTI5 1447 aa10.32□□□□□ -0.76
LAMA4-212ENST00000519245 CTHP32929 405 aa10.31□□□□□ -0.76
LAMA4-212ENST00000519245 RASSF7Q02833 373 aa10.31□□□□□ -0.76
LAMA4-212ENST00000519245 NR5A1Q13285 461 aa10.31□□□□□ -0.76
LAMA4-212ENST00000519245 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
LAMA4-212ENST00000519245 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
LAMA4-212ENST00000519245 TMEM151AQ8N4L1 468 aa10.31□□□□□ -0.76
LAMA4-212ENST00000519245 MEIOBQ8N635 442 aa10.31□□□□□ -0.76
LAMA4-212ENST00000519245 GPR161Q8N6U8 529 aaKnown RBP10.31□□□□□ -0.76
LAMA4-212ENST00000519245 MAP10Q9P2G4 905 aa10.31□□□□□ -0.76
LAMA4-212ENST00000519245 SOS2Q07890 1332 aaPredicted RBP10.31□□□□□ -0.76
LAMA4-212ENST00000519245 SUPT5HO00267 1087 aaKnown RBP10.3□□□□□ -0.76
LAMA4-212ENST00000519245 GDF11O95390 407 aa10.3□□□□□ -0.76
LAMA4-212ENST00000519245 F12P00748 615 aaPredicted RBP10.3□□□□□ -0.76
LAMA4-212ENST00000519245 BMP2P12643 396 aa10.3□□□□□ -0.76
LAMA4-212ENST00000519245 CFAP99D6REC4 459 aa10.28□□□□□ -0.76
LAMA4-212ENST00000519245 CCDC88BA6NC98 1476 aa10.28□□□□□ -0.76
LAMA4-212ENST00000519245 CFTRP13569 1480 aa10.28□□□□□ -0.76
LAMA4-212ENST00000519245 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
LAMA4-212ENST00000519245 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
LAMA4-212ENST00000519245 TULP1O00294 542 aaPredicted RBP10.26□□□□□ -0.77
LAMA4-212ENST00000519245 CNTNAP3BQ96NU0 1288 aa10.26□□□□□ -0.77
LAMA4-212ENST00000519245 CNTNAP3Q9BZ76 1288 aa10.26□□□□□ -0.77
LAMA4-212ENST00000519245 UPP2O95045 317 aa10.25□□□□□ -0.77
LAMA4-212ENST00000519245 GJA5P36382 358 aa10.25□□□□□ -0.77
LAMA4-212ENST00000519245 FANCD2Q9BXW9 1451 aa10.24□□□□□ -0.77
LAMA4-212ENST00000519245 MRC2Q9UBG0 1479 aa10.24□□□□□ -0.77
LAMA4-212ENST00000519245 RSBN1LQ6PCB5 846 aaPredicted RBP10.24□□□□□ -0.77
LAMA4-212ENST00000519245 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
LAMA4-212ENST00000519245 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
LAMA4-212ENST00000519245 SPTLC1O15269 473 aa10.23□□□□□ -0.77
LAMA4-212ENST00000519245 TTLL12Q14166 644 aaPredicted RBP10.22□□□□□ -0.77
LAMA4-212ENST00000519245 ZNF385CQ66K41 422 aaPredicted RBP10.22□□□□□ -0.77
LAMA4-212ENST00000519245 C1QTNF2Q9BXJ5 285 aa10.22□□□□□ -0.77
LAMA4-212ENST00000519245 FSHRP23945 695 aa10.21□□□□□ -0.77
LAMA4-212ENST00000519245 PTSQ03393 145 aa10.21□□□□□ -0.77
LAMA4-212ENST00000519245 AGERQ15109 404 aa10.21□□□□□ -0.77
LAMA4-212ENST00000519245 RNFT1Q5M7Z0 435 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms