RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
TRIM35-202ENST00000519219 ITSN1Q15811 1721 aa12.91□□□□□ -0.34
TRIM35-202ENST00000519219 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
TRIM35-202ENST00000519219 A0A0G2JS52 829 aa12.9□□□□□ -0.34
TRIM35-202ENST00000519219 MYT1Q01538 1121 aa12.9□□□□□ -0.34
TRIM35-202ENST00000519219 ATP7BP35670 1465 aa12.9□□□□□ -0.34
TRIM35-202ENST00000519219 TOPAZ1Q8N9V7 1692 aa12.89□□□□□ -0.35
TRIM35-202ENST00000519219 LRP5O75197 1615 aa12.89□□□□□ -0.35
TRIM35-202ENST00000519219 RGPD1P0DJD0 1748 aa12.89□□□□□ -0.35
TRIM35-202ENST00000519219 WASLO00401 505 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-202ENST00000519219 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
TRIM35-202ENST00000519219 PSDA5PKW4 1024 aaPredicted RBP12.88□□□□□ -0.35
TRIM35-202ENST00000519219 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
TRIM35-202ENST00000519219 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
TRIM35-202ENST00000519219 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
TRIM35-202ENST00000519219 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
TRIM35-202ENST00000519219 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
TRIM35-202ENST00000519219 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
TRIM35-202ENST00000519219 NUTM2GQ5VZR2 741 aa12.86□□□□□ -0.35
TRIM35-202ENST00000519219 NGDNQ8NEJ9 315 aaKnown RBP12.86□□□□□ -0.35
TRIM35-202ENST00000519219 KIAA0232Q92628 1395 aa12.85□□□□□ -0.35
TRIM35-202ENST00000519219 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
TRIM35-202ENST00000519219 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
TRIM35-202ENST00000519219 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
TRIM35-202ENST00000519219 NRKQ7Z2Y5 1582 aa12.84□□□□□ -0.35
TRIM35-202ENST00000519219 KIAA1210Q9ULL0 1709 aa12.82□□□□□ -0.36
TRIM35-202ENST00000519219 HRCP23327 699 aa12.82□□□□□ -0.36
TRIM35-202ENST00000519219 BAG6P46379 1132 aa12.82□□□□□ -0.36
TRIM35-202ENST00000519219 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
TRIM35-202ENST00000519219 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
TRIM35-202ENST00000519219 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
TRIM35-202ENST00000519219 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
TRIM35-202ENST00000519219 SPATA31A1Q5TZJ5 1347 aa12.82□□□□□ -0.36
TRIM35-202ENST00000519219 CAMTA1Q9Y6Y1 1673 aa12.81□□□□□ -0.36
TRIM35-202ENST00000519219 ACEP12821 1306 aa12.81□□□□□ -0.36
TRIM35-202ENST00000519219 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
TRIM35-202ENST00000519219 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
TRIM35-202ENST00000519219 DISP2A7MBM2 1401 aa12.79□□□□□ -0.36
TRIM35-202ENST00000519219 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
TRIM35-202ENST00000519219 EZH2Q15910 746 aaKnown RBP12.79□□□□□ -0.36
TRIM35-202ENST00000519219 USP35Q9P2H5 1018 aa12.79□□□□□ -0.36
TRIM35-202ENST00000519219 RREB1Q92766 1687 aa12.79□□□□□ -0.36
TRIM35-202ENST00000519219 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
TRIM35-202ENST00000519219 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
TRIM35-202ENST00000519219 QRICH2Q9H0J4 1663 aa12.78□□□□□ -0.36
TRIM35-202ENST00000519219 TRIM37O94972 964 aa12.78□□□□□ -0.36
TRIM35-202ENST00000519219 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
TRIM35-202ENST00000519219 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
TRIM35-202ENST00000519219 USP19O94966 1318 aa12.77□□□□□ -0.37
TRIM35-202ENST00000519219 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
TRIM35-202ENST00000519219 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
TRIM35-202ENST00000519219 PLEKHG3A1L390 1219 aa12.75□□□□□ -0.37
TRIM35-202ENST00000519219 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
TRIM35-202ENST00000519219 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
TRIM35-202ENST00000519219 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
TRIM35-202ENST00000519219 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
TRIM35-202ENST00000519219 ABTB2Q8N961 1025 aa12.74□□□□□ -0.37
TRIM35-202ENST00000519219 CABP2Q9NPB3 220 aa12.74□□□□□ -0.37
TRIM35-202ENST00000519219 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
TRIM35-202ENST00000519219 PIK3C2AO00443 1686 aa12.73□□□□□ -0.37
TRIM35-202ENST00000519219 CPDO75976 1380 aa12.73□□□□□ -0.37
TRIM35-202ENST00000519219 APBA3O96018 575 aa12.73□□□□□ -0.37
TRIM35-202ENST00000519219 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
TRIM35-202ENST00000519219 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
TRIM35-202ENST00000519219 WNK3Q9BYP7 1800 aa12.73□□□□□ -0.37
TRIM35-202ENST00000519219 COL18A1P39060 1754 aa12.73□□□□□ -0.37
TRIM35-202ENST00000519219 PEAK1Q9H792 1746 aa12.73□□□□□ -0.37
TRIM35-202ENST00000519219 COL5A2P05997 1499 aaPredicted RBP12.72□□□□□ -0.37
TRIM35-202ENST00000519219 EVA1CP58658 441 aa12.72□□□□□ -0.37
TRIM35-202ENST00000519219 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
TRIM35-202ENST00000519219 CENPJQ9HC77 1338 aaPredicted RBP12.71□□□□□ -0.37
TRIM35-202ENST00000519219 ZBTB7CA1YPR0 619 aa12.71□□□□□ -0.37
TRIM35-202ENST00000519219 GCP02774 474 aa12.71□□□□□ -0.37
TRIM35-202ENST00000519219 SRPK2P78362 688 aaKnown RBP12.71□□□□□ -0.37
TRIM35-202ENST00000519219 TCP11L2Q8N4U5 519 aa12.71□□□□□ -0.37
TRIM35-202ENST00000519219 SLIT3O75094 1523 aa12.71□□□□□ -0.38
TRIM35-202ENST00000519219 USP6P35125 1406 aa12.7□□□□□ -0.38
TRIM35-202ENST00000519219 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
TRIM35-202ENST00000519219 AKAP12Q02952 1782 aa12.69□□□□□ -0.38
TRIM35-202ENST00000519219 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
TRIM35-202ENST00000519219 CABP1Q9NZU7 370 aa12.69□□□□□ -0.38
TRIM35-202ENST00000519219 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
TRIM35-202ENST00000519219 NLRP13Q86W25 1043 aa12.68□□□□□ -0.38
TRIM35-202ENST00000519219 CRB1P82279 1406 aa12.67□□□□□ -0.38
TRIM35-202ENST00000519219 PARD3Q8TEW0 1356 aa12.67□□□□□ -0.38
TRIM35-202ENST00000519219 NLRP6P59044 892 aa12.66□□□□□ -0.38
TRIM35-202ENST00000519219 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
TRIM35-202ENST00000519219 AATKQ6ZMQ8 1374 aa12.66□□□□□ -0.38
TRIM35-202ENST00000519219 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-202ENST00000519219 RGPD4Q7Z3J3 1758 aa12.66□□□□□ -0.38
TRIM35-202ENST00000519219 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
TRIM35-202ENST00000519219 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
TRIM35-202ENST00000519219 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
TRIM35-202ENST00000519219 SIN3AQ96ST3 1273 aa12.64□□□□□ -0.39
TRIM35-202ENST00000519219 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
TRIM35-202ENST00000519219 OVOS2A0A0G2JMS6 1433 aa12.63□□□□□ -0.39
TRIM35-202ENST00000519219 OVOS2A0A0J9YW53 1432 aa12.63□□□□□ -0.39
TRIM35-202ENST00000519219 CPSF1Q10570 1443 aaKnown RBP12.63□□□□□ -0.39
TRIM35-202ENST00000519219 OVOS2Q6IE36 1432 aa12.63□□□□□ -0.39
TRIM35-202ENST00000519219 SOX12O15370 315 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms