RNA–Protein interactions for RNA: ENST00000519205.1

SREK1-205, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-205ENST00000519205 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
SREK1-205ENST00000519205 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
SREK1-205ENST00000519205 GIGYF1O75420 1035 aaPredicted RBP12.73□□□□□ -0.37
SREK1-205ENST00000519205 UNC13BO14795 1591 aa12.73□□□□□ -0.37
SREK1-205ENST00000519205 BAG6P46379 1132 aa12.72□□□□□ -0.37
SREK1-205ENST00000519205 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
SREK1-205ENST00000519205 AXIN2Q9Y2T1 843 aa12.72□□□□□ -0.37
SREK1-205ENST00000519205 ERVK-7P63135 1459 aa12.72□□□□□ -0.37
SREK1-205ENST00000519205 ATF3P18847 181 aa12.71□□□□□ -0.37
SREK1-205ENST00000519205 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
SREK1-205ENST00000519205 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
SREK1-205ENST00000519205 CHD2O14647 1828 aaKnown RBP12.69□□□□□ -0.38
SREK1-205ENST00000519205 GPATCH8Q9UKJ3 1502 aaKnown RBP12.69□□□□□ -0.38
SREK1-205ENST00000519205 SOX12O15370 315 aa12.69□□□□□ -0.38
SREK1-205ENST00000519205 CHGAP10645 457 aaKnown RBP12.69□□□□□ -0.38
SREK1-205ENST00000519205 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
SREK1-205ENST00000519205 PIK3C2BO00750 1634 aa12.69□□□□□ -0.38
SREK1-205ENST00000519205 CEP152O94986 1710 aa12.68□□□□□ -0.38
SREK1-205ENST00000519205 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
SREK1-205ENST00000519205 LRRC59Q96AG4 307 aaKnown RBP12.68□□□□□ -0.38
SREK1-205ENST00000519205 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
SREK1-205ENST00000519205 GLI3P10071 1580 aa12.67□□□□□ -0.38
SREK1-205ENST00000519205 TET3O43151 1660 aa12.67□□□□□ -0.38
SREK1-205ENST00000519205 ADGRD1Q6QNK2 874 aa12.66□□□□□ -0.38
SREK1-205ENST00000519205 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
SREK1-205ENST00000519205 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
SREK1-205ENST00000519205 NUDT7P0C024 238 aa12.65□□□□□ -0.38
SREK1-205ENST00000519205 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
SREK1-205ENST00000519205 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
SREK1-205ENST00000519205 STK25O00506 426 aa12.64□□□□□ -0.39
SREK1-205ENST00000519205 LHX6Q9UPM6 363 aa12.64□□□□□ -0.39
SREK1-205ENST00000519205 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.63□□□□□ -0.39
SREK1-205ENST00000519205 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
SREK1-205ENST00000519205 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
SREK1-205ENST00000519205 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
SREK1-205ENST00000519205 TMEM2Q9UHN6 1383 aa12.63□□□□□ -0.39
SREK1-205ENST00000519205 MROH1Q8NDA8 1641 aa12.62□□□□□ -0.39
SREK1-205ENST00000519205 MARF1Q9Y4F3 1742 aaKnown RBP12.62□□□□□ -0.39
SREK1-205ENST00000519205 RALGAPBQ86X10 1494 aa12.62□□□□□ -0.39
SREK1-205ENST00000519205 NINLQ9Y2I6 1382 aa12.62□□□□□ -0.39
SREK1-205ENST00000519205 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
SREK1-205ENST00000519205 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
SREK1-205ENST00000519205 A0A0G2JS52 829 aa12.6□□□□□ -0.39
SREK1-205ENST00000519205 MYT1Q01538 1121 aa12.6□□□□□ -0.39
SREK1-205ENST00000519205 EZH2Q15910 746 aaKnown RBP12.6□□□□□ -0.39
SREK1-205ENST00000519205 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
SREK1-205ENST00000519205 RGS20O76081 388 aa12.59□□□□□ -0.39
SREK1-205ENST00000519205 COL13A1Q5TAT6 717 aaPredicted RBP12.59□□□□□ -0.39
SREK1-205ENST00000519205 HRO43593 1189 aa12.58□□□□□ -0.4
SREK1-205ENST00000519205 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
SREK1-205ENST00000519205 C19orf44Q9H6X5 657 aa12.58□□□□□ -0.4
SREK1-205ENST00000519205 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
SREK1-205ENST00000519205 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
SREK1-205ENST00000519205 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
SREK1-205ENST00000519205 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
SREK1-205ENST00000519205 IRX2Q9BZI1 471 aaPredicted RBP12.57□□□□□ -0.4
SREK1-205ENST00000519205 STK24Q9Y6E0 443 aa12.57□□□□□ -0.4
SREK1-205ENST00000519205 PTCH1Q13635 1447 aa12.56□□□□□ -0.4
SREK1-205ENST00000519205 PRELPP51888 382 aa12.56□□□□□ -0.4
SREK1-205ENST00000519205 SPON1Q9HCB6 807 aa12.56□□□□□ -0.4
SREK1-205ENST00000519205 ARHGAP35Q9NRY4 1499 aa12.56□□□□□ -0.4
SREK1-205ENST00000519205 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.56□□□□□ -0.4
SREK1-205ENST00000519205 EFCAB6Q5THR3 1501 aa12.56□□□□□ -0.4
SREK1-205ENST00000519205 KIF3CO14782 793 aa12.55□□□□□ -0.4
SREK1-205ENST00000519205 NRKQ7Z2Y5 1582 aa12.55□□□□□ -0.4
SREK1-205ENST00000519205 TK2O00142 265 aa12.54□□□□□ -0.4
SREK1-205ENST00000519205 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
SREK1-205ENST00000519205 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
SREK1-205ENST00000519205 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
SREK1-205ENST00000519205 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
SREK1-205ENST00000519205 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
SREK1-205ENST00000519205 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
SREK1-205ENST00000519205 MYOM1P52179 1685 aa12.53□□□□□ -0.4
SREK1-205ENST00000519205 MST1RQ04912 1400 aa12.53□□□□□ -0.4
SREK1-205ENST00000519205 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
SREK1-205ENST00000519205 KCNQ2O43526 872 aa12.52□□□□□ -0.41
SREK1-205ENST00000519205 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.41
SREK1-205ENST00000519205 MYO5BQ9ULV0 1848 aa12.52□□□□□ -0.41
SREK1-205ENST00000519205 NUP188Q5SRE5 1749 aa12.51□□□□□ -0.41
SREK1-205ENST00000519205 RYDENQ9NUL5 291 aaKnown RBP12.51□□□□□ -0.41
SREK1-205ENST00000519205 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
SREK1-205ENST00000519205 SHANK3Q9BYB0 1731 aa12.51□□□□□ -0.41
SREK1-205ENST00000519205 KCTD12Q96CX2 325 aaKnown RBP12.5□□□□□ -0.41
SREK1-205ENST00000519205 C2orf72A6NCS6 295 aa12.49□□□□□ -0.41
SREK1-205ENST00000519205 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
SREK1-205ENST00000519205 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
SREK1-205ENST00000519205 NCOA3Q9Y6Q9 1424 aa12.48□□□□□ -0.41
SREK1-205ENST00000519205 PPP1R15AO75807 674 aaPredicted RBP12.48□□□□□ -0.41
SREK1-205ENST00000519205 HSPA6P17066 643 aa12.48□□□□□ -0.41
SREK1-205ENST00000519205 DMRTA1Q5VZB9 504 aa12.48□□□□□ -0.41
SREK1-205ENST00000519205 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
SREK1-205ENST00000519205 RREB1Q92766 1687 aa12.48□□□□□ -0.41
SREK1-205ENST00000519205 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
SREK1-205ENST00000519205 GOLGB1Q14789 3259 aaKnown RBP12.47□□□□□ -0.41
SREK1-205ENST00000519205 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
SREK1-205ENST00000519205 FBXO22Q8NEZ5 403 aa12.44□□□□□ -0.42
SREK1-205ENST00000519205 MYOM2P54296 1465 aa12.44□□□□□ -0.42
SREK1-205ENST00000519205 ADGRB2O60241 1585 aa12.43□□□□□ -0.42
SREK1-205ENST00000519205 MBD5Q9P267 1494 aa12.43□□□□□ -0.42
SREK1-205ENST00000519205 NLRP6P59044 892 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms