RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SPATA31A3Q5VYP0 1347 aa10.65□□□□□ -0.7
SDCBP-206ENST00000519115 LMOD2Q6P5Q4 547 aa10.65□□□□□ -0.7
SDCBP-206ENST00000519115 CCDC61Q9Y6R9 512 aa10.65□□□□□ -0.7
SDCBP-206ENST00000519115 SBNO1A3KN83 1393 aa10.65□□□□□ -0.71
SDCBP-206ENST00000519115 CRYBG1Q9Y4K1 1723 aa10.64□□□□□ -0.71
SDCBP-206ENST00000519115 ACEP12821 1306 aa10.64□□□□□ -0.71
SDCBP-206ENST00000519115 ST20-MTHFSA0A0A6YYL1 179 aa10.64□□□□□ -0.71
SDCBP-206ENST00000519115 POLR3AO14802 1390 aaPredicted RBP10.64□□□□□ -0.71
SDCBP-206ENST00000519115 ADAMTS2O95450 1211 aa10.63□□□□□ -0.71
SDCBP-206ENST00000519115 MON2Q7Z3U7 1717 aa10.62□□□□□ -0.71
SDCBP-206ENST00000519115 PLEKHG3A1L390 1219 aa10.62□□□□□ -0.71
SDCBP-206ENST00000519115 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
SDCBP-206ENST00000519115 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
SDCBP-206ENST00000519115 TESK2Q96S53 571 aa10.62□□□□□ -0.71
SDCBP-206ENST00000519115 CABP1Q9NZU7 370 aa10.62□□□□□ -0.71
SDCBP-206ENST00000519115 RGS17Q9UGC6 210 aaPredicted RBP10.62□□□□□ -0.71
SDCBP-206ENST00000519115 ARHGEF10O15013 1369 aa10.62□□□□□ -0.71
SDCBP-206ENST00000519115 ATAD2Q6PL18 1390 aa10.62□□□□□ -0.71
SDCBP-206ENST00000519115 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
SDCBP-206ENST00000519115 CABLES1Q8TDN4 633 aa10.61□□□□□ -0.71
SDCBP-206ENST00000519115 C8orf37Q96NL8 207 aa10.61□□□□□ -0.71
SDCBP-206ENST00000519115 NRKQ7Z2Y5 1582 aa10.6□□□□□ -0.71
SDCBP-206ENST00000519115 PLCH1Q4KWH8 1693 aa10.6□□□□□ -0.71
SDCBP-206ENST00000519115 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
SDCBP-206ENST00000519115 AFF2P51816 1311 aa10.59□□□□□ -0.71
SDCBP-206ENST00000519115 USP6P35125 1406 aa10.59□□□□□ -0.71
SDCBP-206ENST00000519115 HAP1P54257 671 aaPredicted RBP10.59□□□□□ -0.71
SDCBP-206ENST00000519115 NUTM2GQ5VZR2 741 aa10.59□□□□□ -0.71
SDCBP-206ENST00000519115 POTEAQ6S8J7 498 aa10.59□□□□□ -0.71
SDCBP-206ENST00000519115 MYOM1P52179 1685 aa10.58□□□□□ -0.72
SDCBP-206ENST00000519115 EIF4G2P78344 907 aaKnown RBP eCLIP10.58□□□□□ -0.72
SDCBP-206ENST00000519115 C1QBPQ07021 282 aaKnown RBP10.58□□□□□ -0.72
SDCBP-206ENST00000519115 NGLY1Q96IV0 654 aa10.58□□□□□ -0.72
SDCBP-206ENST00000519115 CD163L1Q9NR16 1453 aa10.57□□□□□ -0.72
SDCBP-206ENST00000519115 TMC1Q8TDI8 760 aa10.57□□□□□ -0.72
SDCBP-206ENST00000519115 CPSF1Q10570 1443 aaKnown RBP10.57□□□□□ -0.72
SDCBP-206ENST00000519115 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.56□□□□□ -0.72
SDCBP-206ENST00000519115 SLC12A5Q9H2X9 1139 aa10.56□□□□□ -0.72
SDCBP-206ENST00000519115 NWD2Q9ULI1 1742 aa10.55□□□□□ -0.72
SDCBP-206ENST00000519115 KTN1Q86UP2 1357 aaKnown RBP10.55□□□□□ -0.72
SDCBP-206ENST00000519115 COL14A1Q05707 1796 aaKnown RBP10.55□□□□□ -0.72
SDCBP-206ENST00000519115 HSPA5P11021 654 aaKnown RBP10.55□□□□□ -0.72
SDCBP-206ENST00000519115 TMF1P82094 1093 aa10.55□□□□□ -0.72
SDCBP-206ENST00000519115 ZNF772Q68DY9 489 aaPredicted RBP10.55□□□□□ -0.72
SDCBP-206ENST00000519115 ABTB2Q8N961 1025 aa10.55□□□□□ -0.72
SDCBP-206ENST00000519115 SSH2Q76I76 1423 aa10.55□□□□□ -0.72
SDCBP-206ENST00000519115 NRAPQ86VF7 1730 aa10.55□□□□□ -0.72
SDCBP-206ENST00000519115 A0A1W2PP64 1363 aa10.54□□□□□ -0.72
SDCBP-206ENST00000519115 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
SDCBP-206ENST00000519115 SLIT2O94813 1529 aa10.53□□□□□ -0.72
SDCBP-206ENST00000519115 BRD4O60885 1362 aaPredicted RBP10.53□□□□□ -0.72
SDCBP-206ENST00000519115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.53□□□□□ -0.72
SDCBP-206ENST00000519115 PUS7Q96PZ0 661 aaKnown RBP10.53□□□□□ -0.72
SDCBP-206ENST00000519115 USP21Q9UK80 565 aa10.53□□□□□ -0.72
SDCBP-206ENST00000519115 BCL9LQ86UU0 1499 aa10.53□□□□□ -0.72
SDCBP-206ENST00000519115 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
SDCBP-206ENST00000519115 USP19O94966 1318 aa10.53□□□□□ -0.72
SDCBP-206ENST00000519115 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.72
SDCBP-206ENST00000519115 EDC4Q6P2E9 1401 aaKnown RBP10.52□□□□□ -0.73
SDCBP-206ENST00000519115 KIF20BQ96Q89 1820 aa10.52□□□□□ -0.73
SDCBP-206ENST00000519115 NLRP6P59044 892 aa10.52□□□□□ -0.73
SDCBP-206ENST00000519115 HDGFL2Q7Z4V5 671 aaPredicted RBP10.52□□□□□ -0.73
SDCBP-206ENST00000519115 FNBP4Q8N3X1 1017 aaPredicted RBP10.52□□□□□ -0.73
SDCBP-206ENST00000519115 POLR3GLQ9BT43 218 aa10.52□□□□□ -0.73
SDCBP-206ENST00000519115 ZNF692Q9BU19 519 aaPredicted RBP10.52□□□□□ -0.73
SDCBP-206ENST00000519115 TERF2IPQ9NYB0 399 aa10.52□□□□□ -0.73
SDCBP-206ENST00000519115 SLIT3O75094 1523 aa10.52□□□□□ -0.73
SDCBP-206ENST00000519115 RGPD5Q99666 1765 aa10.52□□□□□ -0.73
SDCBP-206ENST00000519115 KIAA0232Q92628 1395 aa10.52□□□□□ -0.73
SDCBP-206ENST00000519115 ATRNO75882 1429 aa10.51□□□□□ -0.73
SDCBP-206ENST00000519115 FAM83GA6ND36 823 aa10.51□□□□□ -0.73
SDCBP-206ENST00000519115 ZC3H6P61129 1189 aaKnown RBP10.51□□□□□ -0.73
SDCBP-206ENST00000519115 CDCA8Q53HL2 280 aa10.51□□□□□ -0.73
SDCBP-206ENST00000519115 NLRP13Q86W25 1043 aa10.51□□□□□ -0.73
SDCBP-206ENST00000519115 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
SDCBP-206ENST00000519115 PRDM11Q9NQV5 511 aa10.51□□□□□ -0.73
SDCBP-206ENST00000519115 LTN1O94822 1766 aa10.51□□□□□ -0.73
SDCBP-206ENST00000519115 TTC21AQ8NDW8 1320 aa10.51□□□□□ -0.73
SDCBP-206ENST00000519115 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
SDCBP-206ENST00000519115 SOX12O15370 315 aa10.5□□□□□ -0.73
SDCBP-206ENST00000519115 CHRNA2Q15822 529 aa10.5□□□□□ -0.73
SDCBP-206ENST00000519115 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
SDCBP-206ENST00000519115 NME9Q86XW9 330 aa10.5□□□□□ -0.73
SDCBP-206ENST00000519115 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
SDCBP-206ENST00000519115 GLI3P10071 1580 aa10.5□□□□□ -0.73
SDCBP-206ENST00000519115 ANKRD36BQ8N2N9 1353 aa10.5□□□□□ -0.73
SDCBP-206ENST00000519115 NFAT5O94916 1531 aa10.49□□□□□ -0.73
SDCBP-206ENST00000519115 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
SDCBP-206ENST00000519115 RXRBP28702 533 aa10.49□□□□□ -0.73
SDCBP-206ENST00000519115 UNC5CLQ8IV45 518 aa10.49□□□□□ -0.73
SDCBP-206ENST00000519115 TRPC5Q9UL62 973 aaPredicted RBP10.49□□□□□ -0.73
SDCBP-206ENST00000519115 COL18A1P39060 1754 aa10.48□□□□□ -0.73
SDCBP-206ENST00000519115 GCP02774 474 aa10.48□□□□□ -0.73
SDCBP-206ENST00000519115 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
SDCBP-206ENST00000519115 BTG4Q9NY30 223 aa10.48□□□□□ -0.73
SDCBP-206ENST00000519115 BRWD3Q6RI45 1802 aa10.48□□□□□ -0.73
SDCBP-206ENST00000519115 RGS12O14924 1447 aa10.48□□□□□ -0.73
SDCBP-206ENST00000519115 CAMTA1Q9Y6Y1 1673 aa10.47□□□□□ -0.73
SDCBP-206ENST00000519115 RBM6P78332 1123 aaKnown RBP10.47□□□□□ -0.73
SDCBP-206ENST00000519115 DIEXFQ68CQ4 756 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms