RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	PLEKHG5	O94827	1062 aa		34.3	■■■■□ 3.08
CNOT7-204	ENST00000518885	PCGF6	Q9BYE7	350 aa		34.29	■■■■□ 3.08
CNOT7-204	ENST00000518885	ATRN	O75882	1429 aa		34.29	■■■■□ 3.08
CNOT7-204	ENST00000518885	BRD4	O60885	1362 aa	Predicted RBP	34.28	■■■■□ 3.08
CNOT7-204	ENST00000518885	BCL9L	Q86UU0	1499 aa		34.27	■■■■□ 3.08
CNOT7-204	ENST00000518885	ABCA3	Q99758	1704 aa		34.27	■■■■□ 3.08
CNOT7-204	ENST00000518885	UNC5CL	Q8IV45	518 aa		34.27	■■■■□ 3.08
CNOT7-204	ENST00000518885	SBNO2	Q9Y2G9	1366 aa		34.26	■■■■□ 3.08
CNOT7-204	ENST00000518885	SLIT2	O94813	1529 aa		34.25	■■■■□ 3.07
CNOT7-204	ENST00000518885	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	34.24	■■■■□ 3.07
CNOT7-204	ENST00000518885	TIMELESS	Q9UNS1	1208 aa		34.24	■■■■□ 3.07
CNOT7-204	ENST00000518885	ATAD2	Q6PL18	1390 aa		34.22	■■■■□ 3.07
CNOT7-204	ENST00000518885	CABP1	Q9NZU7	370 aa		34.21	■■■■□ 3.07
CNOT7-204	ENST00000518885	RGS12	O14924	1447 aa		34.21	■■■■□ 3.07
CNOT7-204	ENST00000518885	SLC24A1	O60721	1099 aa		34.2	■■■■□ 3.07
CNOT7-204	ENST00000518885	GJD4	Q96KN9	370 aa	Predicted RBP	34.19	■■■■□ 3.06
CNOT7-204	ENST00000518885	NWD2	Q9ULI1	1742 aa		34.18	■■■■□ 3.06
CNOT7-204	ENST00000518885	ABTB2	Q8N961	1025 aa		34.18	■■■■□ 3.06
CNOT7-204	ENST00000518885	PLCH1	Q4KWH8	1693 aa		34.15	■■■■□ 3.06
CNOT7-204	ENST00000518885	ZNF692	Q9BU19	519 aa	Predicted RBP	34.15	■■■■□ 3.06
CNOT7-204	ENST00000518885	FAM83G	A6ND36	823 aa		34.14	■■■■□ 3.06
CNOT7-204	ENST00000518885	COL14A1	Q05707	1796 aa	Known RBP	34.13	■■■■□ 3.05
CNOT7-204	ENST00000518885	VPS72	Q15906	364 aa		34.13	■■■■□ 3.05
CNOT7-204	ENST00000518885	NLRP13	Q86W25	1043 aa		34.13	■■■■□ 3.05
CNOT7-204	ENST00000518885	USP6	P35125	1406 aa		34.13	■■■■□ 3.05
CNOT7-204	ENST00000518885	PRDM11	Q9NQV5	511 aa		34.12	■■■■□ 3.05
CNOT7-204	ENST00000518885	CRYBG1	Q9Y4K1	1723 aa		34.12	■■■■□ 3.05
CNOT7-204	ENST00000518885	CCDC9	Q9Y3X0	531 aa	Known RBP	34.11	■■■■□ 3.05
CNOT7-204	ENST00000518885	NUTM2G	Q5VZR2	741 aa		34.09	■■■■□ 3.05
CNOT7-204	ENST00000518885	BTG4	Q9NY30	223 aa		34.09	■■■■□ 3.05
CNOT7-204	ENST00000518885	PHRF1	Q9P1Y6	1649 aa	Known RBP	34.08	■■■■□ 3.05
CNOT7-204	ENST00000518885	PUS7	Q96PZ0	661 aa	Known RBP	34.06	■■■■□ 3.04
CNOT7-204	ENST00000518885	CCER1	Q8TC90	406 aa	Predicted RBP	34.05	■■■■□ 3.04
CNOT7-204	ENST00000518885	USP19	O94966	1318 aa		34.04	■■■■□ 3.04
CNOT7-204	ENST00000518885	KIAA0232	Q92628	1395 aa		34.04	■■■■□ 3.04
CNOT7-204	ENST00000518885	UPF1	Q92900	1129 aa	Known RBP eCLIP	34.04	■■■■□ 3.04
CNOT7-204	ENST00000518885	GLI3	P10071	1580 aa		34.02	■■■■□ 3.04
CNOT7-204	ENST00000518885	ST20-MTHFS	A0A0A6YYL1	179 aa		34.01	■■■■□ 3.03
CNOT7-204	ENST00000518885	NLRP6	P59044	892 aa		34.01	■■■■□ 3.03
CNOT7-204	ENST00000518885	ZC3H6	P61129	1189 aa	Known RBP	34.01	■■■■□ 3.03
CNOT7-204	ENST00000518885	TTC21A	Q8NDW8	1320 aa		34.01	■■■■□ 3.03
CNOT7-204	ENST00000518885	KTN1	Q86UP2	1357 aa	Known RBP	34	■■■■□ 3.03
CNOT7-204	ENST00000518885	NRK	Q7Z2Y5	1582 aa		33.99	■■■■□ 3.03
CNOT7-204	ENST00000518885	CPSF1	Q10570	1443 aa	Known RBP	33.99	■■■■□ 3.03
CNOT7-204	ENST00000518885	SSH2	Q76I76	1423 aa		33.99	■■■■□ 3.03
CNOT7-204	ENST00000518885	TMC1	Q8TDI8	760 aa		33.99	■■■■□ 3.03
CNOT7-204	ENST00000518885	NRAP	Q86VF7	1730 aa		33.99	■■■■□ 3.03
CNOT7-204	ENST00000518885	CPD	O75976	1380 aa		33.98	■■■■□ 3.03
CNOT7-204	ENST00000518885	GC	P02774	474 aa		33.98	■■■■□ 3.03
CNOT7-204	ENST00000518885	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.98	■■■■□ 3.03
CNOT7-204	ENST00000518885	AKAP12	Q02952	1782 aa		33.98	■■■■□ 3.03
CNOT7-204	ENST00000518885	TTC21B	Q7Z4L5	1316 aa		33.97	■■■■□ 3.03
CNOT7-204	ENST00000518885	USP47	Q96K76	1375 aa		33.97	■■■■□ 3.03
CNOT7-204	ENST00000518885	TERF2IP	Q9NYB0	399 aa		33.96	■■■■□ 3.03
CNOT7-204	ENST00000518885	NINL	Q9Y2I6	1382 aa		33.96	■■■■□ 3.03
CNOT7-204	ENST00000518885	CHRNA2	Q15822	529 aa		33.94	■■■■□ 3.02
CNOT7-204	ENST00000518885	TESK2	Q96S53	571 aa		33.94	■■■■□ 3.02
CNOT7-204	ENST00000518885	ONECUT3	O60422	494 aa	Predicted RBP	33.93	■■■■□ 3.02
CNOT7-204	ENST00000518885	EVA1C	P58658	441 aa		33.92	■■■■□ 3.02
CNOT7-204	ENST00000518885		A0A0G2JS52	829 aa		33.91	■■■■□ 3.02
CNOT7-204	ENST00000518885	TMF1	P82094	1093 aa		33.91	■■■■□ 3.02
CNOT7-204	ENST00000518885	MYT1	Q01538	1121 aa		33.91	■■■■□ 3.02
CNOT7-204	ENST00000518885	SEPT12	Q8IYM1	358 aa		33.91	■■■■□ 3.02
CNOT7-204	ENST00000518885	KCNH5	Q8NCM2	988 aa		33.91	■■■■□ 3.02
CNOT7-204	ENST00000518885	PIK3C2A	O00443	1686 aa		33.9	■■■■□ 3.02
CNOT7-204	ENST00000518885	SPATA31A5	Q5VU36	1347 aa		33.9	■■■■□ 3.02
CNOT7-204	ENST00000518885	SPATA31A7	Q8IWB4	1347 aa		33.9	■■■■□ 3.02
CNOT7-204	ENST00000518885	SLIT3	O75094	1523 aa		33.89	■■■■□ 3.02
CNOT7-204	ENST00000518885	CDCA8	Q53HL2	280 aa		33.89	■■■■□ 3.02
CNOT7-204	ENST00000518885	MON2	Q7Z3U7	1717 aa		33.88	■■■■□ 3.01
CNOT7-204	ENST00000518885	STRN4	Q9NRL3	753 aa		33.88	■■■■□ 3.01
CNOT7-204	ENST00000518885	FAM98C	Q17RN3	349 aa	Known RBP	33.86	■■■■□ 3.01
CNOT7-204	ENST00000518885	CCDC125	Q86Z20	511 aa		33.86	■■■■□ 3.01
CNOT7-204	ENST00000518885	SLC12A5	Q9H2X9	1139 aa		33.86	■■■■□ 3.01
CNOT7-204	ENST00000518885	EDC4	Q6P2E9	1401 aa	Known RBP	33.84	■■■■□ 3.01
CNOT7-204	ENST00000518885	CD163L1	Q9NR16	1453 aa		33.82	■■■■□ 3.01
CNOT7-204	ENST00000518885	ZBTB7C	A1YPR0	619 aa		33.82	■■■■□ 3
CNOT7-204	ENST00000518885	KRT27	Q7Z3Y8	459 aa		33.82	■■■■□ 3
CNOT7-204	ENST00000518885	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.82	■■■■□ 3
CNOT7-204	ENST00000518885	AATK	Q6ZMQ8	1374 aa		33.82	■■■■□ 3
CNOT7-204	ENST00000518885	SPATA31A1	Q5TZJ5	1347 aa		33.81	■■■■□ 3
CNOT7-204	ENST00000518885	LMO7	Q8WWI1	1683 aa		33.8	■■■■□ 3
CNOT7-204	ENST00000518885		A0A1W2PP64	1363 aa		33.79	■■■■□ 3
CNOT7-204	ENST00000518885	CAMTA1	Q9Y6Y1	1673 aa		33.79	■■■■□ 3
CNOT7-204	ENST00000518885	USP31	Q70CQ4	1352 aa		33.78	■■■■□ 3
CNOT7-204	ENST00000518885	COL5A2	P05997	1499 aa	Predicted RBP	33.75	■■■□□ 2.99
CNOT7-204	ENST00000518885	EP400	Q96L91	3159 aa		33.74	■■■□□ 2.99
CNOT7-204	ENST00000518885	BRWD3	Q6RI45	1802 aa		33.74	■■■□□ 2.99
CNOT7-204	ENST00000518885	THRAP3	Q9Y2W1	955 aa	Known RBP	33.74	■■■□□ 2.99
CNOT7-204	ENST00000518885	SOX12	O15370	315 aa		33.73	■■■□□ 2.99
CNOT7-204	ENST00000518885	LARP1	Q6PKG0	1096 aa	Known RBP	33.73	■■■□□ 2.99
CNOT7-204	ENST00000518885	BARGIN	Q6ZT62	677 aa		33.73	■■■□□ 2.99
CNOT7-204	ENST00000518885	ARHGEF25	Q86VW2	580 aa		33.73	■■■□□ 2.99
CNOT7-204	ENST00000518885	ANKRD36B	Q8N2N9	1353 aa		33.72	■■■□□ 2.99
CNOT7-204	ENST00000518885	SF3B2	Q13435	895 aa	Known RBP	33.72	■■■□□ 2.99
CNOT7-204	ENST00000518885	NME9	Q86XW9	330 aa		33.72	■■■□□ 2.99
CNOT7-204	ENST00000518885	TCP11L2	Q8N4U5	519 aa		33.72	■■■□□ 2.99
CNOT7-204	ENST00000518885	USP35	Q9P2H5	1018 aa		33.72	■■■□□ 2.99
CNOT7-204	ENST00000518885	USP54	Q70EL1	1684 aa		33.71	■■■□□ 2.99
CNOT7-204	ENST00000518885	THSD7A	Q9UPZ6	1657 aa		33.71	■■■□□ 2.99

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms