RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ZSCAN1Q8NBB4 408 aa7.74□□□□□ -1.17
PCM1-208ENST00000518877 H3BM21 787 aa7.73□□□□□ -1.17
PCM1-208ENST00000518877 WDR4P57081 412 aaKnown RBP7.73□□□□□ -1.17
PCM1-208ENST00000518877 MRPL14Q6P1L8 145 aaKnown RBP7.73□□□□□ -1.17
PCM1-208ENST00000518877 ADH1CP00326 375 aa7.72□□□□□ -1.17
PCM1-208ENST00000518877 ARID5BQ14865 1188 aa7.72□□□□□ -1.17
PCM1-208ENST00000518877 DESI1Q6ICB0 168 aa7.72□□□□□ -1.17
PCM1-208ENST00000518877 GIGYF2Q6Y7W6 1299 aaKnown RBP7.72□□□□□ -1.17
PCM1-208ENST00000518877 FAM174AQ8TBP5 190 aa7.72□□□□□ -1.17
PCM1-208ENST00000518877 PURBQ96QR8 312 aaKnown RBP7.72□□□□□ -1.17
PCM1-208ENST00000518877 BEGAINQ9BUH8 593 aa7.72□□□□□ -1.17
PCM1-208ENST00000518877 MPNDQ8N594 471 aa7.71□□□□□ -1.18
PCM1-208ENST00000518877 TIMP2P16035 220 aa7.7□□□□□ -1.18
PCM1-208ENST00000518877 AGERQ15109 404 aa7.7□□□□□ -1.18
PCM1-208ENST00000518877 DIXDC1Q155Q3 683 aa7.7□□□□□ -1.18
PCM1-208ENST00000518877 AMHR2Q16671 573 aa7.7□□□□□ -1.18
PCM1-208ENST00000518877 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
PCM1-208ENST00000518877 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
PCM1-208ENST00000518877 BARGINQ6ZT62 677 aa7.69□□□□□ -1.18
PCM1-208ENST00000518877 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
PCM1-208ENST00000518877 RSBN1LQ6PCB5 846 aaPredicted RBP7.68□□□□□ -1.18
PCM1-208ENST00000518877 LYPD8Q6UX82 237 aa7.68□□□□□ -1.18
PCM1-208ENST00000518877 ZMYND10O75800 440 aa7.67□□□□□ -1.18
PCM1-208ENST00000518877 ZIC2O95409 532 aaPredicted RBP7.67□□□□□ -1.18
PCM1-208ENST00000518877 TSC1Q92574 1164 aa7.67□□□□□ -1.18
PCM1-208ENST00000518877 FOXJ1Q92949 421 aa7.67□□□□□ -1.18
PCM1-208ENST00000518877 ZBTB3Q9H5J0 574 aa7.67□□□□□ -1.18
PCM1-208ENST00000518877 MAP10Q9P2G4 905 aa7.67□□□□□ -1.18
PCM1-208ENST00000518877 PCDHB15Q9Y5E8 787 aa7.67□□□□□ -1.18
PCM1-208ENST00000518877 CFAP99D6REC4 459 aa7.66□□□□□ -1.18
PCM1-208ENST00000518877 GJA5P36382 358 aa7.66□□□□□ -1.18
PCM1-208ENST00000518877 CSPP1Q1MSJ5 1256 aa7.66□□□□□ -1.18
PCM1-208ENST00000518877 C6orf118Q5T5N4 469 aa7.66□□□□□ -1.18
PCM1-208ENST00000518877 ZFAND3Q9H8U3 227 aa7.66□□□□□ -1.18
PCM1-208ENST00000518877 MAN1A2O60476 641 aa7.65□□□□□ -1.18
PCM1-208ENST00000518877 HRCP23327 699 aa7.65□□□□□ -1.18
PCM1-208ENST00000518877 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
PCM1-208ENST00000518877 ZC3H15Q8WU90 426 aaKnown RBP7.65□□□□□ -1.18
PCM1-208ENST00000518877 UPP2O95045 317 aa7.64□□□□□ -1.19
PCM1-208ENST00000518877 NR5A1Q13285 461 aa7.64□□□□□ -1.19
PCM1-208ENST00000518877 ITPKCQ96DU7 683 aa7.64□□□□□ -1.19
PCM1-208ENST00000518877 CDK15Q96Q40 435 aa7.64□□□□□ -1.19
PCM1-208ENST00000518877 SPTLC1O15269 473 aa7.63□□□□□ -1.19
PCM1-208ENST00000518877 F12P00748 615 aaPredicted RBP7.63□□□□□ -1.19
PCM1-208ENST00000518877 BMP2P12643 396 aa7.63□□□□□ -1.19
PCM1-208ENST00000518877 RIC3Q7Z5B4 369 aa7.63□□□□□ -1.19
PCM1-208ENST00000518877 BPHLQ86WA6 291 aaPredicted RBP7.63□□□□□ -1.19
PCM1-208ENST00000518877 PARP9Q8IXQ6 854 aa7.63□□□□□ -1.19
PCM1-208ENST00000518877 CABLES1Q8TDN4 633 aa7.63□□□□□ -1.19
PCM1-208ENST00000518877 KLF16Q9BXK1 252 aaPredicted RBP7.63□□□□□ -1.19
PCM1-208ENST00000518877 NUTM2BA6NNL0 878 aaPredicted RBP7.61□□□□□ -1.19
PCM1-208ENST00000518877 NUTM2EB1AL46 878 aaPredicted RBP7.61□□□□□ -1.19
PCM1-208ENST00000518877 NR3C2P08235 984 aa7.61□□□□□ -1.19
PCM1-208ENST00000518877 NUTM2DQ5VT03 806 aaPredicted RBP7.61□□□□□ -1.19
PCM1-208ENST00000518877 PRPF38BQ5VTL8 546 aaKnown RBP7.61□□□□□ -1.19
PCM1-208ENST00000518877 NUTM2AQ8IVF1 878 aaPredicted RBP7.61□□□□□ -1.19
PCM1-208ENST00000518877 PER1O15534 1290 aaPredicted RBP7.6□□□□□ -1.19
PCM1-208ENST00000518877 VSIG8P0DPA2 414 aa7.6□□□□□ -1.19
PCM1-208ENST00000518877 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
PCM1-208ENST00000518877 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
PCM1-208ENST00000518877 GRM5P41594 1212 aa7.59□□□□□ -1.19
PCM1-208ENST00000518877 ARMC2Q8NEN0 867 aa7.59□□□□□ -1.19
PCM1-208ENST00000518877 TRIM66O15016 1216 aa7.58□□□□□ -1.2
PCM1-208ENST00000518877 FSHRP23945 695 aa7.58□□□□□ -1.2
PCM1-208ENST00000518877 VASH1Q7L8A9 365 aaPredicted RBP7.58□□□□□ -1.2
PCM1-208ENST00000518877 MEIOBQ8N635 442 aa7.58□□□□□ -1.2
PCM1-208ENST00000518877 MAGEB6P1A0A0J9YX57 407 aa7.57□□□□□ -1.2
PCM1-208ENST00000518877 PPFIA3O75145 1194 aa7.57□□□□□ -1.2
PCM1-208ENST00000518877 NBPF14Q5TI25 921 aa7.57□□□□□ -1.2
PCM1-208ENST00000518877 AK7Q96M32 723 aa7.57□□□□□ -1.2
PCM1-208ENST00000518877 HELBQ8NG08 1087 aaPredicted RBP7.56□□□□□ -1.2
PCM1-208ENST00000518877 LIMD1Q9UGP4 676 aa7.56□□□□□ -1.2
PCM1-208ENST00000518877 QPCTQ16769 361 aa7.55□□□□□ -1.2
PCM1-208ENST00000518877 MYSM1Q5VVJ2 828 aa7.55□□□□□ -1.2
PCM1-208ENST00000518877 TSEN34Q9BSV6 310 aaKnown RBP7.55□□□□□ -1.2
PCM1-208ENST00000518877 CARD14Q9BXL6 1004 aa7.55□□□□□ -1.2
PCM1-208ENST00000518877 DNMT3LQ9UJW3 386 aa7.55□□□□□ -1.2
PCM1-208ENST00000518877 SOS2Q07890 1332 aaPredicted RBP7.54□□□□□ -1.2
PCM1-208ENST00000518877 SH3RF1Q7Z6J0 888 aa7.54□□□□□ -1.2
PCM1-208ENST00000518877 C1QTNF2Q9BXJ5 285 aa7.54□□□□□ -1.2
PCM1-208ENST00000518877 EMILIN1Q9Y6C2 1016 aa7.54□□□□□ -1.2
PCM1-208ENST00000518877 CCDC116Q8IYX3 515 aa7.53□□□□□ -1.2
PCM1-208ENST00000518877 MAP4K5Q9Y4K4 846 aa7.53□□□□□ -1.2
PCM1-208ENST00000518877 LILRB3O75022 631 aa7.52□□□□□ -1.21
PCM1-208ENST00000518877 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.52□□□□□ -1.211e-8■□□□□ 10.8
PCM1-208ENST00000518877 TRMT44Q8IYL2 757 aaKnown RBP7.52□□□□□ -1.21
PCM1-208ENST00000518877 TTLL8A6PVC2 850 aa7.51□□□□□ -1.21
PCM1-208ENST00000518877 TUSC1Q2TAM9 212 aa7.51□□□□□ -1.21
PCM1-208ENST00000518877 SH3BP5LQ7L8J4 393 aa7.51□□□□□ -1.21
PCM1-208ENST00000518877 FIGNL2A6NMB9 653 aa7.5□□□□□ -1.21
PCM1-208ENST00000518877 PDE4DQ08499 809 aa7.5□□□□□ -1.21
PCM1-208ENST00000518877 RTL5Q5HYW3 569 aaPredicted RBP7.5□□□□□ -1.21
PCM1-208ENST00000518877 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
PCM1-208ENST00000518877 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
PCM1-208ENST00000518877 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
PCM1-208ENST00000518877 CLK2P49760 499 aaKnown RBP7.49□□□□□ -1.21
PCM1-208ENST00000518877 PTSQ03393 145 aa7.49□□□□□ -1.21
PCM1-208ENST00000518877 GPKOWQ92917 476 aaPredicted RBP eCLIP7.49□□□□□ -1.21
PCM1-208ENST00000518877 KCNMA1Q12791 1236 aa7.48□□□□□ -1.21
PCM1-208ENST00000518877 CBLBQ13191 982 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms