RNA–Protein interactions for RNA: ENST00000518789.5

ARFGEF1-205, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-205ENST00000518789 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
ARFGEF1-205ENST00000518789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.93□□□□□ -0.182e-7■■■■□ 25.2
ARFGEF1-205ENST00000518789 TTC21BQ7Z4L5 1316 aa13.92□□□□□ -0.18
ARFGEF1-205ENST00000518789 UBAP1LF5GYI3 381 aa13.92□□□□□ -0.18
ARFGEF1-205ENST00000518789 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
ARFGEF1-205ENST00000518789 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
ARFGEF1-205ENST00000518789 BRINP3Q76B58 766 aa13.92□□□□□ -0.18
ARFGEF1-205ENST00000518789 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
ARFGEF1-205ENST00000518789 COG3Q96JB2 828 aa13.91□□□□□ -0.18
ARFGEF1-205ENST00000518789 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
ARFGEF1-205ENST00000518789 FYB1O15117 783 aa13.9□□□□□ -0.18
ARFGEF1-205ENST00000518789 CNGB1Q14028 1251 aaPredicted RBP13.9□□□□□ -0.18
ARFGEF1-205ENST00000518789 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
ARFGEF1-205ENST00000518789 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
ARFGEF1-205ENST00000518789 NLRP13Q86W25 1043 aa13.89□□□□□ -0.19
ARFGEF1-205ENST00000518789 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
ARFGEF1-205ENST00000518789 GGNBP2Q9H3C7 697 aa13.88□□□□□ -0.19
ARFGEF1-205ENST00000518789 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
ARFGEF1-205ENST00000518789 SBNO1A3KN83 1393 aa13.87□□□□□ -0.19
ARFGEF1-205ENST00000518789 NLRP6P59044 892 aa13.87□□□□□ -0.19
ARFGEF1-205ENST00000518789 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
ARFGEF1-205ENST00000518789 SSH2Q76I76 1423 aa13.87□□□□□ -0.19
ARFGEF1-205ENST00000518789 MYBBP1AQ9BQG0 1328 aaKnown RBP13.87□□□□□ -0.19
ARFGEF1-205ENST00000518789 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
ARFGEF1-205ENST00000518789 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
ARFGEF1-205ENST00000518789 NME9Q86XW9 330 aa13.86□□□□□ -0.19
ARFGEF1-205ENST00000518789 ANKRD26Q9UPS8 1709 aa13.86□□□□□ -0.19
ARFGEF1-205ENST00000518789 ARHGEF10O15013 1369 aa13.85□□□□□ -0.19
ARFGEF1-205ENST00000518789 USP31Q70CQ4 1352 aa13.85□□□□□ -0.19
ARFGEF1-205ENST00000518789 PARD3Q8TEW0 1356 aa13.85□□□□□ -0.19
ARFGEF1-205ENST00000518789 MIER1Q8N108 512 aa13.85□□□□□ -0.19
ARFGEF1-205ENST00000518789 LRRC59Q96AG4 307 aaKnown RBP13.85□□□□□ -0.19
ARFGEF1-205ENST00000518789 SOS2Q07890 1332 aaPredicted RBP13.85□□□□□ -0.19
ARFGEF1-205ENST00000518789 ROBO1Q9Y6N7 1651 aa13.85□□□□□ -0.19
ARFGEF1-205ENST00000518789 NRKQ7Z2Y5 1582 aa13.84□□□□□ -0.19
ARFGEF1-205ENST00000518789 XPCQ01831 940 aaPredicted RBP13.84□□□□□ -0.19
ARFGEF1-205ENST00000518789 KCNH5Q8NCM2 988 aa13.84□□□□□ -0.19
ARFGEF1-205ENST00000518789 CFAP53Q96M91 514 aa13.83□□□□□ -0.2
ARFGEF1-205ENST00000518789 SPATA31A3Q5VYP0 1347 aa13.83□□□□□ -0.2
ARFGEF1-205ENST00000518789 NHSL1Q5SYE7 1610 aa13.82□□□□□ -0.2
ARFGEF1-205ENST00000518789 SOCS7O14512 581 aa13.82□□□□□ -0.2
ARFGEF1-205ENST00000518789 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
ARFGEF1-205ENST00000518789 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
ARFGEF1-205ENST00000518789 PXDNQ92626 1479 aa13.81□□□□□ -0.2
ARFGEF1-205ENST00000518789 PPP2R1AP30153 589 aa13.81□□□□□ -0.2
ARFGEF1-205ENST00000518789 TNNT2P45379 298 aaPredicted RBP13.81□□□□□ -0.2
ARFGEF1-205ENST00000518789 DDX17Q92841 729 aaKnown RBP13.81□□□□□ -0.2
ARFGEF1-205ENST00000518789 AHDC1Q5TGY3 1603 aaPredicted RBP13.81□□□□□ -0.2
ARFGEF1-205ENST00000518789 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
ARFGEF1-205ENST00000518789 NUTM2GQ5VZR2 741 aa13.8□□□□□ -0.2
ARFGEF1-205ENST00000518789 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
ARFGEF1-205ENST00000518789 PIK3C2AO00443 1686 aa13.79□□□□□ -0.2
ARFGEF1-205ENST00000518789 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
ARFGEF1-205ENST00000518789 OVOS2A0A0J9YW53 1432 aa13.79□□□□□ -0.2
ARFGEF1-205ENST00000518789 OVOS2Q6IE36 1432 aa13.79□□□□□ -0.2
ARFGEF1-205ENST00000518789 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
ARFGEF1-205ENST00000518789 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
ARFGEF1-205ENST00000518789 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
ARFGEF1-205ENST00000518789 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
ARFGEF1-205ENST00000518789 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
ARFGEF1-205ENST00000518789 GCP02774 474 aa13.77□□□□□ -0.21
ARFGEF1-205ENST00000518789 MTHFSP49914 203 aa13.77□□□□□ -0.21
ARFGEF1-205ENST00000518789 AMPHP49418 695 aa13.76□□□□□ -0.21
ARFGEF1-205ENST00000518789 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
ARFGEF1-205ENST00000518789 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
ARFGEF1-205ENST00000518789 USP19O94966 1318 aa13.75□□□□□ -0.21
ARFGEF1-205ENST00000518789 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
ARFGEF1-205ENST00000518789 SOX12O15370 315 aa13.75□□□□□ -0.21
ARFGEF1-205ENST00000518789 POLKQ9UBT6 870 aa13.75□□□□□ -0.21
ARFGEF1-205ENST00000518789 WDR43Q15061 677 aaKnown RBP eCLIP13.73□□□□□ -0.21
ARFGEF1-205ENST00000518789 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
ARFGEF1-205ENST00000518789 RRS1Q15050 365 aaKnown RBP13.72□□□□□ -0.21
ARFGEF1-205ENST00000518789 SLIT3O75094 1523 aa13.72□□□□□ -0.21
ARFGEF1-205ENST00000518789 MED1Q15648 1581 aaPredicted RBP13.71□□□□□ -0.21
ARFGEF1-205ENST00000518789 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
ARFGEF1-205ENST00000518789 PNNQ9H307 717 aaKnown RBP13.71□□□□□ -0.21
ARFGEF1-205ENST00000518789 COL16A1Q07092 1604 aaPredicted RBP13.71□□□□□ -0.22
ARFGEF1-205ENST00000518789 RTL1A6NKG5 1358 aa13.71□□□□□ -0.22
ARFGEF1-205ENST00000518789 INSRP06213 1382 aa13.71□□□□□ -0.22
ARFGEF1-205ENST00000518789 FLT4P35916 1363 aa13.71□□□□□ -0.22
ARFGEF1-205ENST00000518789 JCADQ9P266 1359 aa13.71□□□□□ -0.22
ARFGEF1-205ENST00000518789 MARF1Q9Y4F3 1742 aaKnown RBP13.7□□□□□ -0.22
ARFGEF1-205ENST00000518789 MAP3K19Q56UN5 1328 aa13.7□□□□□ -0.22
ARFGEF1-205ENST00000518789 ZBTB7CA1YPR0 619 aa13.7□□□□□ -0.22
ARFGEF1-205ENST00000518789 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
ARFGEF1-205ENST00000518789 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
ARFGEF1-205ENST00000518789 IP6K1Q92551 441 aa13.7□□□□□ -0.22
ARFGEF1-205ENST00000518789 EMILIN1Q9Y6C2 1016 aa13.7□□□□□ -0.22
ARFGEF1-205ENST00000518789 PNPLA6Q8IY17 1366 aa13.7□□□□□ -0.22
ARFGEF1-205ENST00000518789 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
ARFGEF1-205ENST00000518789 LTN1O94822 1766 aa13.69□□□□□ -0.22
ARFGEF1-205ENST00000518789 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
ARFGEF1-205ENST00000518789 SMG6Q86US8 1419 aaKnown RBP13.69□□□□□ -0.22
ARFGEF1-205ENST00000518789 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-205ENST00000518789 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
ARFGEF1-205ENST00000518789 FBLN1P23142 703 aa13.68□□□□□ -0.22
ARFGEF1-205ENST00000518789 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
ARFGEF1-205ENST00000518789 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
ARFGEF1-205ENST00000518789 CPDO75976 1380 aa13.68□□□□□ -0.22
ARFGEF1-205ENST00000518789 SPATA31A6Q5VVP1 1343 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms