RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
IGHV3-6-201ENST00000518407 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
IGHV3-6-201ENST00000518407 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.39
IGHV3-6-201ENST00000518407 BRD4O60885 1362 aaPredicted RBP17.51■□□□□ 0.39
IGHV3-6-201ENST00000518407 ANKRD36BQ8N2N9 1353 aa17.51■□□□□ 0.39
IGHV3-6-201ENST00000518407 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
IGHV3-6-201ENST00000518407 SPATA31A3Q5VYP0 1347 aa17.5■□□□□ 0.39
IGHV3-6-201ENST00000518407 ANKRD26Q9UPS8 1709 aa17.5■□□□□ 0.39
IGHV3-6-201ENST00000518407 JCADQ9P266 1359 aa17.5■□□□□ 0.39
IGHV3-6-201ENST00000518407 PSME1Q06323 249 aa17.49■□□□□ 0.39
IGHV3-6-201ENST00000518407 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
IGHV3-6-201ENST00000518407 EDC4Q6P2E9 1401 aaKnown RBP17.48■□□□□ 0.39
IGHV3-6-201ENST00000518407 TMC1Q8TDI8 760 aa17.48■□□□□ 0.39
IGHV3-6-201ENST00000518407 LRRC59Q96AG4 307 aaKnown RBP17.48■□□□□ 0.39
IGHV3-6-201ENST00000518407 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
IGHV3-6-201ENST00000518407 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
IGHV3-6-201ENST00000518407 ARHGEF10O15013 1369 aa17.46■□□□□ 0.39
IGHV3-6-201ENST00000518407 LRP6O75581 1613 aa17.46■□□□□ 0.39
IGHV3-6-201ENST00000518407 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
IGHV3-6-201ENST00000518407 TERF2IPQ9NYB0 399 aa17.45■□□□□ 0.38
IGHV3-6-201ENST00000518407 SLIT3O75094 1523 aa17.45■□□□□ 0.38
IGHV3-6-201ENST00000518407 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
IGHV3-6-201ENST00000518407 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
IGHV3-6-201ENST00000518407 TTC21AQ8NDW8 1320 aa17.43■□□□□ 0.38
IGHV3-6-201ENST00000518407 LTN1O94822 1766 aa17.42■□□□□ 0.38
IGHV3-6-201ENST00000518407 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
IGHV3-6-201ENST00000518407 PLCH1Q4KWH8 1693 aa17.41■□□□□ 0.38
IGHV3-6-201ENST00000518407 SPATA31A6Q5VVP1 1343 aa17.41■□□□□ 0.38
IGHV3-6-201ENST00000518407 OVOS2A0A0J9YW53 1432 aa17.4■□□□□ 0.38
IGHV3-6-201ENST00000518407 OVOS2Q6IE36 1432 aa17.4■□□□□ 0.38
IGHV3-6-201ENST00000518407 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
IGHV3-6-201ENST00000518407 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
IGHV3-6-201ENST00000518407 USP19O94966 1318 aa17.4■□□□□ 0.38
IGHV3-6-201ENST00000518407 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
IGHV3-6-201ENST00000518407 NFAT5O94916 1531 aa17.39■□□□□ 0.37
IGHV3-6-201ENST00000518407 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
IGHV3-6-201ENST00000518407 PANK3Q9H999 370 aa17.37■□□□□ 0.37
IGHV3-6-201ENST00000518407 NWD2Q9ULI1 1742 aa17.37■□□□□ 0.37
IGHV3-6-201ENST00000518407 COL18A1P39060 1754 aa17.37■□□□□ 0.37
IGHV3-6-201ENST00000518407 RGPD5Q99666 1765 aa17.37■□□□□ 0.37
IGHV3-6-201ENST00000518407 NRAPQ86VF7 1730 aa17.36■□□□□ 0.37
IGHV3-6-201ENST00000518407 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.36■□□□□ 0.37
IGHV3-6-201ENST00000518407 COL14A1Q05707 1796 aaKnown RBP17.36■□□□□ 0.37
IGHV3-6-201ENST00000518407 LMOD2Q6P5Q4 547 aa17.36■□□□□ 0.37
IGHV3-6-201ENST00000518407 NME9Q86XW9 330 aa17.36■□□□□ 0.37
IGHV3-6-201ENST00000518407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.37
IGHV3-6-201ENST00000518407 LMO7Q8WWI1 1683 aa17.36■□□□□ 0.37
IGHV3-6-201ENST00000518407 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
IGHV3-6-201ENST00000518407 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
IGHV3-6-201ENST00000518407 CABLES1Q8TDN4 633 aa17.34■□□□□ 0.37
IGHV3-6-201ENST00000518407 ZRANB1Q9UGI0 708 aa17.34■□□□□ 0.37
IGHV3-6-201ENST00000518407 NLRP13Q86W25 1043 aa17.33■□□□□ 0.36
IGHV3-6-201ENST00000518407 FYB1O15117 783 aa17.32■□□□□ 0.36
IGHV3-6-201ENST00000518407 NLRP6P59044 892 aa17.32■□□□□ 0.36
IGHV3-6-201ENST00000518407 PER1O15534 1290 aaPredicted RBP17.31■□□□□ 0.36
IGHV3-6-201ENST00000518407 ABCC6O95255 1503 aa17.31■□□□□ 0.36
IGHV3-6-201ENST00000518407 NUTM2BA6NNL0 878 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-6-201ENST00000518407 NUTM2EB1AL46 878 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-6-201ENST00000518407 NUTM2AQ8IVF1 878 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-6-201ENST00000518407 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
IGHV3-6-201ENST00000518407 CPDO75976 1380 aa17.29■□□□□ 0.36
IGHV3-6-201ENST00000518407 NSD2O96028 1365 aa17.29■□□□□ 0.36
IGHV3-6-201ENST00000518407 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
IGHV3-6-201ENST00000518407 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-6-201ENST00000518407 SLIT2O94813 1529 aa17.28■□□□□ 0.36
IGHV3-6-201ENST00000518407 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
IGHV3-6-201ENST00000518407 GGNBP2Q9H3C7 697 aa17.28■□□□□ 0.36
IGHV3-6-201ENST00000518407 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
IGHV3-6-201ENST00000518407 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
IGHV3-6-201ENST00000518407 GCP02774 474 aa17.27■□□□□ 0.36
IGHV3-6-201ENST00000518407 KIAA0232Q92628 1395 aa17.27■□□□□ 0.35
IGHV3-6-201ENST00000518407 COG3Q96JB2 828 aa17.26■□□□□ 0.35
IGHV3-6-201ENST00000518407 ADAMTS2O95450 1211 aa17.25■□□□□ 0.35
IGHV3-6-201ENST00000518407 KNSTRNQ9Y448 316 aa17.25■□□□□ 0.35
IGHV3-6-201ENST00000518407 FAM208AQ9UK61 1670 aaKnown RBP17.24■□□□□ 0.35
IGHV3-6-201ENST00000518407 CAMTA1Q9Y6Y1 1673 aa17.24■□□□□ 0.35
IGHV3-6-201ENST00000518407 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-6-201ENST00000518407 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
IGHV3-6-201ENST00000518407 WNK3Q9BYP7 1800 aa17.24■□□□□ 0.35
IGHV3-6-201ENST00000518407 RGPD2P0DJD1 1756 aa17.23■□□□□ 0.35
IGHV3-6-201ENST00000518407 BCL9LQ86UU0 1499 aa17.23■□□□□ 0.35
IGHV3-6-201ENST00000518407 ZC3H6P61129 1189 aaKnown RBP17.22■□□□□ 0.35
IGHV3-6-201ENST00000518407 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
IGHV3-6-201ENST00000518407 ARHGEF25Q86VW2 580 aa17.22■□□□□ 0.35
IGHV3-6-201ENST00000518407 AATKQ6ZMQ8 1374 aa17.21■□□□□ 0.35
IGHV3-6-201ENST00000518407 FAM83GA6ND36 823 aa17.21■□□□□ 0.35
IGHV3-6-201ENST00000518407 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.35
IGHV3-6-201ENST00000518407 C8orf37Q96NL8 207 aa17.21■□□□□ 0.35
IGHV3-6-201ENST00000518407 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.34
IGHV3-6-201ENST00000518407 AFF2P51816 1311 aa17.21■□□□□ 0.34
IGHV3-6-201ENST00000518407 FNBP4Q8N3X1 1017 aaPredicted RBP17.2■□□□□ 0.34
IGHV3-6-201ENST00000518407 PRDM11Q9NQV5 511 aa17.2■□□□□ 0.34
IGHV3-6-201ENST00000518407 COL5A2P05997 1499 aaPredicted RBP17.19■□□□□ 0.34
IGHV3-6-201ENST00000518407 SOX12O15370 315 aa17.19■□□□□ 0.34
IGHV3-6-201ENST00000518407 RTL1A6NKG5 1358 aa17.18■□□□□ 0.34
IGHV3-6-201ENST00000518407 FBLN1P23142 703 aa17.18■□□□□ 0.34
IGHV3-6-201ENST00000518407 CHRNA2Q15822 529 aa17.18■□□□□ 0.34
IGHV3-6-201ENST00000518407 RGS17Q9UGC6 210 aaPredicted RBP17.18■□□□□ 0.34
IGHV3-6-201ENST00000518407 GLI3P10071 1580 aa17.18■□□□□ 0.34
IGHV3-6-201ENST00000518407 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms