RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 TRAK1Q9UPV9 953 aa14.59□□□□□ -0.07
BRD9-216ENST00000518251 TMF1P82094 1093 aa14.58□□□□□ -0.08
BRD9-216ENST00000518251 CENPJQ9HC77 1338 aaPredicted RBP14.58□□□□□ -0.08
BRD9-216ENST00000518251 SBNO1A3KN83 1393 aa14.57□□□□□ -0.08
BRD9-216ENST00000518251 TRPM3Q9HCF6 1732 aaPredicted RBP14.56□□□□□ -0.08
BRD9-216ENST00000518251 DEFB132Q7Z7B7 95 aa14.56□□□□□ -0.08
BRD9-216ENST00000518251 SLC24A1O60721 1099 aa14.55□□□□□ -0.08
BRD9-216ENST00000518251 VPS72Q15906 364 aa14.55□□□□□ -0.08
BRD9-216ENST00000518251 POLR3GLQ9BT43 218 aa14.55□□□□□ -0.08
BRD9-216ENST00000518251 SEPT12Q8IYM1 358 aa14.54□□□□□ -0.08
BRD9-216ENST00000518251 ARHGEF10O15013 1369 aa14.54□□□□□ -0.08
BRD9-216ENST00000518251 ANKARQ7Z5J8 1434 aa14.54□□□□□ -0.08
BRD9-216ENST00000518251 CRYBG1Q9Y4K1 1723 aa14.54□□□□□ -0.08
BRD9-216ENST00000518251 RGPD8O14715 1765 aaPredicted RBP14.53□□□□□ -0.08
BRD9-216ENST00000518251 ALS2Q96Q42 1657 aa14.53□□□□□ -0.08
BRD9-216ENST00000518251 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
BRD9-216ENST00000518251 KRT28Q7Z3Y7 464 aa14.53□□□□□ -0.08
BRD9-216ENST00000518251 THSD7AQ9UPZ6 1657 aa14.52□□□□□ -0.08
BRD9-216ENST00000518251 CABLES1Q8TDN4 633 aa14.52□□□□□ -0.09
BRD9-216ENST00000518251 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.09
BRD9-216ENST00000518251 MYOM1P52179 1685 aa14.52□□□□□ -0.09
BRD9-216ENST00000518251 TULP4Q9NRJ4 1543 aa14.51□□□□□ -0.09
BRD9-216ENST00000518251 COL14A1Q05707 1796 aaKnown RBP14.51□□□□□ -0.09
BRD9-216ENST00000518251 TNS1Q9HBL0 1735 aaKnown RBP14.5□□□□□ -0.09
BRD9-216ENST00000518251 ONECUT3O60422 494 aaPredicted RBP14.5□□□□□ -0.09
BRD9-216ENST00000518251 SIRT1Q96EB6 747 aa14.5□□□□□ -0.09
BRD9-216ENST00000518251 RGPD1P0DJD0 1748 aa14.49□□□□□ -0.09
BRD9-216ENST00000518251 HAP1P54257 671 aaPredicted RBP14.49□□□□□ -0.09
BRD9-216ENST00000518251 KRT27Q7Z3Y8 459 aa14.49□□□□□ -0.09
BRD9-216ENST00000518251 MIER1Q8N108 512 aa14.49□□□□□ -0.09
BRD9-216ENST00000518251 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
BRD9-216ENST00000518251 SF3B2Q13435 895 aaKnown RBP14.48□□□□□ -0.09
BRD9-216ENST00000518251 POGKQ9P215 609 aa14.48□□□□□ -0.09
BRD9-216ENST00000518251 DISP2A7MBM2 1401 aa14.48□□□□□ -0.09
BRD9-216ENST00000518251 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
BRD9-216ENST00000518251 PSME1Q06323 249 aa14.47□□□□□ -0.09
BRD9-216ENST00000518251 EVC2Q86UK5 1308 aa14.46□□□□□ -0.09
BRD9-216ENST00000518251 ANP32CO43423 234 aa14.46□□□□□ -0.09
BRD9-216ENST00000518251 CCDC9Q9Y3X0 531 aaKnown RBP14.46□□□□□ -0.09
BRD9-216ENST00000518251 FAM83GA6ND36 823 aa14.45□□□□□ -0.1
BRD9-216ENST00000518251 SAFB2Q14151 953 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRD9-216ENST00000518251 PHRF1Q9P1Y6 1649 aaKnown RBP14.44□□□□□ -0.1
BRD9-216ENST00000518251 PSDA5PKW4 1024 aaPredicted RBP14.44□□□□□ -0.1
BRD9-216ENST00000518251 FAM98CQ17RN3 349 aaKnown RBP14.44□□□□□ -0.1
BRD9-216ENST00000518251 MINK1Q8N4C8 1332 aaPredicted RBP14.43□□□□□ -0.1
BRD9-216ENST00000518251 PRR36Q9H6K5 1346 aa14.43□□□□□ -0.1
BRD9-216ENST00000518251 BAG6P46379 1132 aa14.43□□□□□ -0.1
BRD9-216ENST00000518251 LMOD2Q6P5Q4 547 aa14.43□□□□□ -0.1
BRD9-216ENST00000518251 PMFBP1Q8TBY8 1022 aa14.43□□□□□ -0.1
BRD9-216ENST00000518251 PUS7Q96PZ0 661 aaKnown RBP14.43□□□□□ -0.1
BRD9-216ENST00000518251 ATP7BP35670 1465 aa14.43□□□□□ -0.1
BRD9-216ENST00000518251 A0A0G2JS52 829 aa14.42□□□□□ -0.1
BRD9-216ENST00000518251 MYT1Q01538 1121 aa14.42□□□□□ -0.1
BRD9-216ENST00000518251 BTG4Q9NY30 223 aa14.42□□□□□ -0.1
BRD9-216ENST00000518251 SPATA31A5Q5VU36 1347 aa14.41□□□□□ -0.1
BRD9-216ENST00000518251 SPATA31A7Q8IWB4 1347 aa14.41□□□□□ -0.1
BRD9-216ENST00000518251 TOPAZ1Q8N9V7 1692 aa14.4□□□□□ -0.1
BRD9-216ENST00000518251 NRKQ7Z2Y5 1582 aa14.4□□□□□ -0.1
BRD9-216ENST00000518251 RREB1Q92766 1687 aa14.39□□□□□ -0.11
BRD9-216ENST00000518251 NINLQ9Y2I6 1382 aa14.39□□□□□ -0.11
BRD9-216ENST00000518251 ITSN1Q15811 1721 aa14.39□□□□□ -0.11
BRD9-216ENST00000518251 FAM182BQ5T319 152 aa14.39□□□□□ -0.11
BRD9-216ENST00000518251 PANK3Q9H999 370 aa14.39□□□□□ -0.11
BRD9-216ENST00000518251 SRPK2P78362 688 aaKnown RBP14.38□□□□□ -0.11
BRD9-216ENST00000518251 EN1Q05925 392 aaPredicted RBP14.38□□□□□ -0.11
BRD9-216ENST00000518251 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
BRD9-216ENST00000518251 NUP188Q5SRE5 1749 aa14.37□□□□□ -0.11
BRD9-216ENST00000518251 CCER2I3L3R5 266 aa14.36□□□□□ -0.11
BRD9-216ENST00000518251 CDK19Q9BWU1 502 aa14.36□□□□□ -0.11
BRD9-216ENST00000518251 PRKRIP1Q9H875 184 aaPredicted RBP14.36□□□□□ -0.11
BRD9-216ENST00000518251 LMO7Q8WWI1 1683 aa14.36□□□□□ -0.11
BRD9-216ENST00000518251 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
BRD9-216ENST00000518251 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
BRD9-216ENST00000518251 WASLO00401 505 aaPredicted RBP14.35□□□□□ -0.11
BRD9-216ENST00000518251 PER1O15534 1290 aaPredicted RBP14.35□□□□□ -0.11
BRD9-216ENST00000518251 R3HDM1Q15032 1099 aaKnown RBP14.35□□□□□ -0.11
BRD9-216ENST00000518251 SPATA31A1Q5TZJ5 1347 aa14.35□□□□□ -0.11
BRD9-216ENST00000518251 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
BRD9-216ENST00000518251 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
BRD9-216ENST00000518251 PRDM11Q9NQV5 511 aa14.34□□□□□ -0.11
BRD9-216ENST00000518251 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
BRD9-216ENST00000518251 SSH2Q76I76 1423 aa14.33□□□□□ -0.11
BRD9-216ENST00000518251 EZH2Q15910 746 aaKnown RBP14.33□□□□□ -0.12
BRD9-216ENST00000518251 SLC12A5Q9H2X9 1139 aa14.32□□□□□ -0.12
BRD9-216ENST00000518251 KNSTRNQ9Y448 316 aa14.32□□□□□ -0.12
BRD9-216ENST00000518251 POLR3AO14802 1390 aaPredicted RBP14.32□□□□□ -0.12
BRD9-216ENST00000518251 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
BRD9-216ENST00000518251 CAMKK2Q96RR4 588 aa14.31□□□□□ -0.12
BRD9-216ENST00000518251 NPC1L1Q9UHC9 1359 aa14.31□□□□□ -0.12
BRD9-216ENST00000518251 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
BRD9-216ENST00000518251 CAMTA1Q9Y6Y1 1673 aa14.3□□□□□ -0.12
BRD9-216ENST00000518251 RALBP1Q15311 655 aa14.3□□□□□ -0.12
BRD9-216ENST00000518251 CHRNA2Q15822 529 aa14.3□□□□□ -0.12
BRD9-216ENST00000518251 A0A1W2PP64 1363 aa14.3□□□□□ -0.12
BRD9-216ENST00000518251 PPIP5K1Q6PFW1 1433 aa14.3□□□□□ -0.12
BRD9-216ENST00000518251 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
BRD9-216ENST00000518251 CNGB1Q14028 1251 aaPredicted RBP14.29□□□□□ -0.12
BRD9-216ENST00000518251 NGDNQ8NEJ9 315 aaKnown RBP14.29□□□□□ -0.12
BRD9-216ENST00000518251 MON2Q7Z3U7 1717 aa14.29□□□□□ -0.12
BRD9-216ENST00000518251 PARP4Q9UKK3 1724 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms