RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
ARFGEF1-203ENST00000518230 C14orf93Q9H972 538 aaKnown RBP12.25□□□□□ -0.45
ARFGEF1-203ENST00000518230 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
ARFGEF1-203ENST00000518230 EXOSC9Q06265 439 aaKnown RBP12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 SHPRHQ149N8 1683 aa12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 KIAA1211Q6ZU35 1233 aa12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 NSD3Q9BZ95 1437 aa12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 RICTORQ6R327 1708 aa12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 SSH1Q8WYL5 1049 aa12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
ARFGEF1-203ENST00000518230 RBM25P49756 843 aaKnown RBP12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 FAM69CQ0P6D2 419 aa12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 RAB3GAP1Q15042 981 aa12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 SMC5Q8IY18 1101 aa12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 GBP4Q96PP9 640 aa12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 NCOA3Q9Y6Q9 1424 aa12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 RPGRIP1LQ68CZ1 1315 aa12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 ISY1Q9ULR0 285 aaKnown RBP12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
ARFGEF1-203ENST00000518230 GLI2P10070 1586 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 IQSEC2Q5JU85 1478 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 SNX21Q969T3 373 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 SIGLEC1Q9BZZ2 1709 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 SSFA2P28290 1259 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 RBM10P98175 930 aaKnown RBP12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 KIF2CQ99661 725 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 TRAK1Q9UPV9 953 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 AK9Q5TCS8 1911 aa12.22□□□□□ -0.45
ARFGEF1-203ENST00000518230 CAMSAP1Q5T5Y3 1602 aa12.21□□□□□ -0.45
ARFGEF1-203ENST00000518230 CCDC27Q2M243 656 aa12.21□□□□□ -0.45
ARFGEF1-203ENST00000518230 DDX19BQ9UMR2 479 aa12.21□□□□□ -0.45
ARFGEF1-203ENST00000518230 IDI1Q13907 227 aa12.21□□□□□ -0.46
ARFGEF1-203ENST00000518230 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.46
ARFGEF1-203ENST00000518230 ATF7IPQ6VMQ6 1270 aa12.21□□□□□ -0.46
ARFGEF1-203ENST00000518230 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 RIMBP3CA6NJZ7 1639 aa12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 RIMBP3BA6NNM3 1639 aa12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 RIMBP3Q9UFD9 1639 aa12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 TPM2P07951 284 aa12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 NASPP49321 788 aaPredicted RBP12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 SKOR2Q2VWA4 1001 aaPredicted RBP12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 PPLO60437 1756 aa12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 SETBP1Q9Y6X0 1596 aa12.2□□□□□ -0.46
ARFGEF1-203ENST00000518230 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
ARFGEF1-203ENST00000518230 SBNO2Q9Y2G9 1366 aa12.19□□□□□ -0.46
ARFGEF1-203ENST00000518230 ADGRB1O14514 1584 aa12.19□□□□□ -0.46
ARFGEF1-203ENST00000518230 NUCB1Q02818 461 aa12.19□□□□□ -0.46
ARFGEF1-203ENST00000518230 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
ARFGEF1-203ENST00000518230 CFAP53Q96M91 514 aa12.19□□□□□ -0.46
ARFGEF1-203ENST00000518230 PDCL3Q9H2J4 239 aa12.19□□□□□ -0.46
ARFGEF1-203ENST00000518230 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
ARFGEF1-203ENST00000518230 DDX49Q9Y6V7 483 aaKnown RBP12.18□□□□□ -0.46
ARFGEF1-203ENST00000518230 PIK3C2BO00750 1634 aa12.18□□□□□ -0.46
ARFGEF1-203ENST00000518230 CHD1LQ86WJ1 897 aa12.18□□□□□ -0.46
ARFGEF1-203ENST00000518230 U2SURPO15042 1029 aaKnown RBP12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 CCDC173Q0VFZ6 552 aa12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 PPP1R9BQ96SB3 815 aa12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 ANKRD45Q5TZF3 282 aa12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 MYO3AQ8NEV4 1616 aa12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 SLC52A1Q9NWF4 448 aa12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 K7ELQ4 463 aaPredicted RBP12.17□□□□□ -0.46
ARFGEF1-203ENST00000518230 RIPK4P57078 832 aa12.16□□□□□ -0.46
ARFGEF1-203ENST00000518230 C1orf115Q9H7X2 142 aa12.16□□□□□ -0.46
ARFGEF1-203ENST00000518230 TRIM35Q9UPQ4 493 aa12.16□□□□□ -0.46
ARFGEF1-203ENST00000518230 OFD1O75665 1012 aa12.16□□□□□ -0.46
ARFGEF1-203ENST00000518230 MSNP26038 577 aaKnown RBP12.16□□□□□ -0.46
ARFGEF1-203ENST00000518230 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
ARFGEF1-203ENST00000518230 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
ARFGEF1-203ENST00000518230 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
ARFGEF1-203ENST00000518230 FBXO31Q5XUX0 539 aaPredicted RBP12.15□□□□□ -0.46
ARFGEF1-203ENST00000518230 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
ARFGEF1-203ENST00000518230 ANP32BQ92688 251 aaKnown RBP12.15□□□□□ -0.46
ARFGEF1-203ENST00000518230 R3HCC1Q9Y3T6 440 aaKnown RBP12.15□□□□□ -0.46
ARFGEF1-203ENST00000518230 NEXMIFQ5QGS0 1516 aa12.15□□□□□ -0.46
ARFGEF1-203ENST00000518230 FAM13BQ9NYF5 915 aa12.15□□□□□ -0.47
ARFGEF1-203ENST00000518230 MCTP1Q6DN14 999 aa12.14□□□□□ -0.47
ARFGEF1-203ENST00000518230 ZC3H13Q5T200 1668 aaKnown RBP12.14□□□□□ -0.47
ARFGEF1-203ENST00000518230 BMP2KLQ5H9B9 411 aa12.14□□□□□ -0.47
ARFGEF1-203ENST00000518230 ARID3AQ99856 593 aa12.14□□□□□ -0.47
ARFGEF1-203ENST00000518230 GOLGA6L22H0YM25 854 aa12.13□□□□□ -0.47
ARFGEF1-203ENST00000518230 KLHL40Q2TBA0 621 aa12.13□□□□□ -0.47
ARFGEF1-203ENST00000518230 CAVIN1Q6NZI2 390 aaKnown RBP12.13□□□□□ -0.47
ARFGEF1-203ENST00000518230 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
ARFGEF1-203ENST00000518230 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
ARFGEF1-203ENST00000518230 PKP1Q13835 747 aa12.12□□□□□ -0.47
ARFGEF1-203ENST00000518230 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
ARFGEF1-203ENST00000518230 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
ARFGEF1-203ENST00000518230 PTMSP20962 102 aa12.12□□□□□ -0.47
ARFGEF1-203ENST00000518230 RBSNQ9H1K0 784 aa12.12□□□□□ -0.47
ARFGEF1-203ENST00000518230 SENP3Q9H4L4 574 aaPredicted RBP12.12□□□□□ -0.47
ARFGEF1-203ENST00000518230 TSPOAP1O95153 1857 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms