RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 CCDC146Q8IYE0 955 aa14.14□□□□□ -0.15
SPIDR-204ENST00000517824 CCDC136Q96JN2 1154 aa14.14□□□□□ -0.15
SPIDR-204ENST00000517824 CDK19Q9BWU1 502 aa14.14□□□□□ -0.15
SPIDR-204ENST00000517824 TECPR2O15040 1411 aa14.14□□□□□ -0.15
SPIDR-204ENST00000517824 RNF123Q5XPI4 1314 aa14.14□□□□□ -0.15
SPIDR-204ENST00000517824 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
SPIDR-204ENST00000517824 PLEKHG1Q9ULL1 1385 aa14.13□□□□□ -0.15
SPIDR-204ENST00000517824 GOLGA2Q08379 1002 aa14.13□□□□□ -0.15
SPIDR-204ENST00000517824 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.13□□□□□ -0.15
SPIDR-204ENST00000517824 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
SPIDR-204ENST00000517824 NKTRP30414 1462 aaKnown RBP14.12□□□□□ -0.15
SPIDR-204ENST00000517824 ROBO1Q9Y6N7 1651 aa14.11□□□□□ -0.15
SPIDR-204ENST00000517824 PPIP5K1Q6PFW1 1433 aa14.11□□□□□ -0.15
SPIDR-204ENST00000517824 POTEAQ6S8J7 498 aa14.11□□□□□ -0.15
SPIDR-204ENST00000517824 PLEKHH1Q9ULM0 1364 aa14.1□□□□□ -0.15
SPIDR-204ENST00000517824 B4GALNT3Q6L9W6 998 aa14.1□□□□□ -0.15
SPIDR-204ENST00000517824 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
SPIDR-204ENST00000517824 CD163L1Q9NR16 1453 aa14.1□□□□□ -0.15
SPIDR-204ENST00000517824 METP08581 1390 aa14.09□□□□□ -0.15
SPIDR-204ENST00000517824 EDC4Q6P2E9 1401 aaKnown RBP14.09□□□□□ -0.15
SPIDR-204ENST00000517824 MTHFSP49914 203 aa14.09□□□□□ -0.15
SPIDR-204ENST00000517824 RUNDC1Q96C34 613 aa14.09□□□□□ -0.15
SPIDR-204ENST00000517824 CDCA7LQ96GN5 454 aa14.09□□□□□ -0.15
SPIDR-204ENST00000517824 SLAIN2Q9P270 581 aa14.09□□□□□ -0.15
SPIDR-204ENST00000517824 MSH6P52701 1360 aa14.09□□□□□ -0.15
SPIDR-204ENST00000517824 FMN2Q9NZ56 1722 aa14.08□□□□□ -0.16
SPIDR-204ENST00000517824 APAF1O14727 1248 aa14.08□□□□□ -0.16
SPIDR-204ENST00000517824 WAPLQ7Z5K2 1190 aa14.08□□□□□ -0.16
SPIDR-204ENST00000517824 MAPK8IP3Q9UPT6 1336 aa14.08□□□□□ -0.16
SPIDR-204ENST00000517824 XRN1Q8IZH2 1706 aaKnown RBP14.07□□□□□ -0.16
SPIDR-204ENST00000517824 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-204ENST00000517824 E9PSI1 815 aa14.07□□□□□ -0.16
SPIDR-204ENST00000517824 WASLO00401 505 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-204ENST00000517824 NEFMP07197 916 aa14.07□□□□□ -0.16
SPIDR-204ENST00000517824 SIRT1Q96EB6 747 aa14.07□□□□□ -0.16
SPIDR-204ENST00000517824 PNNQ9H307 717 aaKnown RBP14.07□□□□□ -0.16
SPIDR-204ENST00000517824 GGNBP2Q9H3C7 697 aa14.07□□□□□ -0.16
SPIDR-204ENST00000517824 TBX22Q9Y458 520 aa14.07□□□□□ -0.16
SPIDR-204ENST00000517824 NRKQ7Z2Y5 1582 aa14.07□□□□□ -0.16
SPIDR-204ENST00000517824 RGPD8O14715 1765 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-204ENST00000517824 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
SPIDR-204ENST00000517824 ADAMTS13Q76LX8 1427 aa14.06□□□□□ -0.16
SPIDR-204ENST00000517824 U2AF1L5P0DN76 240 aaPredicted RBP14.05□□□□□ -0.16
SPIDR-204ENST00000517824 U2AF1Q01081 240 aaKnown RBP eCLIP14.05□□□□□ -0.16
SPIDR-204ENST00000517824 CHD2O14647 1828 aaKnown RBP14.04□□□□□ -0.16
SPIDR-204ENST00000517824 U2SURPO15042 1029 aaKnown RBP14.04□□□□□ -0.16
SPIDR-204ENST00000517824 COL3A1P02461 1466 aaPredicted RBP14.04□□□□□ -0.16
SPIDR-204ENST00000517824 CANXP27824 592 aaKnown RBP14.03□□□□□ -0.16
SPIDR-204ENST00000517824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.03□□□□□ -0.162e-6■■■□□ 15.1
SPIDR-204ENST00000517824 ZNF521Q96K83 1311 aa14.03□□□□□ -0.16
SPIDR-204ENST00000517824 JCADQ9P266 1359 aa14.03□□□□□ -0.16
SPIDR-204ENST00000517824 PTCH1Q13635 1447 aa14.03□□□□□ -0.16
SPIDR-204ENST00000517824 NALCNQ8IZF0 1738 aa14.03□□□□□ -0.16
SPIDR-204ENST00000517824 CDK12Q9NYV4 1490 aaPredicted RBP14.02□□□□□ -0.16
SPIDR-204ENST00000517824 NCOA3Q9Y6Q9 1424 aa14.02□□□□□ -0.16
SPIDR-204ENST00000517824 SLFN5Q08AF3 891 aa14.02□□□□□ -0.17
SPIDR-204ENST00000517824 DUSP27Q5VZP5 1158 aa14.01□□□□□ -0.17
SPIDR-204ENST00000517824 NUDT16Q96DE0 195 aaKnown RBP14.01□□□□□ -0.17
SPIDR-204ENST00000517824 DLG5Q8TDM6 1919 aa14.01□□□□□ -0.17
SPIDR-204ENST00000517824 PHLPP1O60346 1717 aa14.01□□□□□ -0.17
SPIDR-204ENST00000517824 CPSF1Q10570 1443 aaKnown RBP14□□□□□ -0.17
SPIDR-204ENST00000517824 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
SPIDR-204ENST00000517824 FYB1O15117 783 aa14□□□□□ -0.17
SPIDR-204ENST00000517824 DIAPH1O60610 1272 aaKnown RBP14□□□□□ -0.17
SPIDR-204ENST00000517824 NEUROD2Q15784 382 aa14□□□□□ -0.17
SPIDR-204ENST00000517824 MYH16Q9H6N6 1097 aa14□□□□□ -0.17
SPIDR-204ENST00000517824 COL16A1Q07092 1604 aaPredicted RBP14□□□□□ -0.17
SPIDR-204ENST00000517824 PTPRUQ92729 1446 aa13.99□□□□□ -0.17
SPIDR-204ENST00000517824 PIK3R4Q99570 1358 aa13.99□□□□□ -0.17
SPIDR-204ENST00000517824 TCP11L2Q8N4U5 519 aa13.99□□□□□ -0.17
SPIDR-204ENST00000517824 EXOC6Q8TAG9 804 aa13.99□□□□□ -0.17
SPIDR-204ENST00000517824 COG3Q96JB2 828 aa13.99□□□□□ -0.17
SPIDR-204ENST00000517824 CCDC61Q9Y6R9 512 aa13.99□□□□□ -0.17
SPIDR-204ENST00000517824 LRP6O75581 1613 aa13.98□□□□□ -0.17
SPIDR-204ENST00000517824 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-204ENST00000517824 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
SPIDR-204ENST00000517824 CADPS2Q86UW7 1296 aa13.98□□□□□ -0.17
SPIDR-204ENST00000517824 C19orf44Q9H6X5 657 aa13.98□□□□□ -0.17
SPIDR-204ENST00000517824 RRP7AQ9Y3A4 280 aaKnown RBP13.98□□□□□ -0.17
SPIDR-204ENST00000517824 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
SPIDR-204ENST00000517824 MAPK8IP2Q13387 824 aaPredicted RBP13.97□□□□□ -0.17
SPIDR-204ENST00000517824 WDR63Q8IWG1 891 aa13.97□□□□□ -0.17
SPIDR-204ENST00000517824 WWC1Q8IX03 1113 aa13.97□□□□□ -0.17
SPIDR-204ENST00000517824 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
SPIDR-204ENST00000517824 AMOTL2Q9Y2J4 779 aa13.97□□□□□ -0.17
SPIDR-204ENST00000517824 ATF3P18847 181 aa13.96□□□□□ -0.17
SPIDR-204ENST00000517824 CCDC27Q2M243 656 aa13.96□□□□□ -0.17
SPIDR-204ENST00000517824 CRBNQ96SW2 442 aa13.96□□□□□ -0.17
SPIDR-204ENST00000517824 AHDC1Q5TGY3 1603 aaPredicted RBP13.96□□□□□ -0.17
SPIDR-204ENST00000517824 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
SPIDR-204ENST00000517824 PLIN1O60240 522 aa13.95□□□□□ -0.18
SPIDR-204ENST00000517824 SRCAPQ6ZRS2 3230 aa13.94□□□□□ -0.18
SPIDR-204ENST00000517824 BRINP3Q76B58 766 aa13.94□□□□□ -0.18
SPIDR-204ENST00000517824 AATKQ6ZMQ8 1374 aa13.94□□□□□ -0.18
SPIDR-204ENST00000517824 ANKARQ7Z5J8 1434 aa13.93□□□□□ -0.18
SPIDR-204ENST00000517824 VIRMAQ69YN4 1812 aaKnown RBP13.93□□□□□ -0.18
SPIDR-204ENST00000517824 NME9Q86XW9 330 aa13.93□□□□□ -0.18
SPIDR-204ENST00000517824 USP6P35125 1406 aa13.92□□□□□ -0.18
SPIDR-204ENST00000517824 TRMT2AQ8IZ69 625 aaKnown RBP13.92□□□□□ -0.18
SPIDR-204ENST00000517824 RBM19Q9Y4C8 960 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms