RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
CTNNA1-204ENST00000517656 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
CTNNA1-204ENST00000517656 BTG4Q9NY30 223 aa12.23□□□□□ -0.45
CTNNA1-204ENST00000517656 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
CTNNA1-204ENST00000517656 ITSN1Q15811 1721 aa12.23□□□□□ -0.45
CTNNA1-204ENST00000517656 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
CTNNA1-204ENST00000517656 POLR3AO14802 1390 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-204ENST00000517656 NBPF1Q3BBV0 1214 aa12.22□□□□□ -0.45
CTNNA1-204ENST00000517656 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
CTNNA1-204ENST00000517656 CRYBG1Q9Y4K1 1723 aa12.21□□□□□ -0.45
CTNNA1-204ENST00000517656 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.45
CTNNA1-204ENST00000517656 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.45
CTNNA1-204ENST00000517656 TOPAZ1Q8N9V7 1692 aa12.2□□□□□ -0.46
CTNNA1-204ENST00000517656 ACEP12821 1306 aa12.2□□□□□ -0.46
CTNNA1-204ENST00000517656 PLEKHG3A1L390 1219 aa12.2□□□□□ -0.46
CTNNA1-204ENST00000517656 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
CTNNA1-204ENST00000517656 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
CTNNA1-204ENST00000517656 BRWD3Q6RI45 1802 aa12.2□□□□□ -0.46
CTNNA1-204ENST00000517656 SPATA31A5Q5VU36 1347 aa12.19□□□□□ -0.46
CTNNA1-204ENST00000517656 SPATA31A7Q8IWB4 1347 aa12.19□□□□□ -0.46
CTNNA1-204ENST00000517656 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-204ENST00000517656 NBPF8Q3BBV2 869 aa12.19□□□□□ -0.46
CTNNA1-204ENST00000517656 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
CTNNA1-204ENST00000517656 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-204ENST00000517656 A0A0G2JS52 829 aa12.18□□□□□ -0.46
CTNNA1-204ENST00000517656 MYT1Q01538 1121 aa12.18□□□□□ -0.46
CTNNA1-204ENST00000517656 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-204ENST00000517656 DEFB132Q7Z7B7 95 aa12.17□□□□□ -0.46
CTNNA1-204ENST00000517656 PHRF1Q9P1Y6 1649 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-204ENST00000517656 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-204ENST00000517656 NUTM2GQ5VZR2 741 aa12.16□□□□□ -0.46
CTNNA1-204ENST00000517656 L3MBTL2Q969R5 705 aa12.16□□□□□ -0.46
CTNNA1-204ENST00000517656 PPIP5K1Q6PFW1 1433 aa12.16□□□□□ -0.46
CTNNA1-204ENST00000517656 ZC3H6P61129 1189 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-204ENST00000517656 CHRNA2Q15822 529 aa12.15□□□□□ -0.46
CTNNA1-204ENST00000517656 ABTB2Q8N961 1025 aa12.15□□□□□ -0.46
CTNNA1-204ENST00000517656 THSD7AQ9UPZ6 1657 aa12.15□□□□□ -0.46
CTNNA1-204ENST00000517656 USP19O94966 1318 aa12.14□□□□□ -0.47
CTNNA1-204ENST00000517656 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
CTNNA1-204ENST00000517656 CABP2Q9NPB3 220 aa12.14□□□□□ -0.47
CTNNA1-204ENST00000517656 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-204ENST00000517656 CPDO75976 1380 aa12.14□□□□□ -0.47
CTNNA1-204ENST00000517656 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
CTNNA1-204ENST00000517656 BAG6P46379 1132 aa12.13□□□□□ -0.47
CTNNA1-204ENST00000517656 SIN3AQ96ST3 1273 aa12.13□□□□□ -0.47
CTNNA1-204ENST00000517656 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
CTNNA1-204ENST00000517656 QRICH2Q9H0J4 1663 aa12.13□□□□□ -0.47
CTNNA1-204ENST00000517656 NLRP13Q86W25 1043 aa12.12□□□□□ -0.47
CTNNA1-204ENST00000517656 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
CTNNA1-204ENST00000517656 FAM182BQ5T319 152 aa12.11□□□□□ -0.47
CTNNA1-204ENST00000517656 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
CTNNA1-204ENST00000517656 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
CTNNA1-204ENST00000517656 USP6P35125 1406 aa12.11□□□□□ -0.47
CTNNA1-204ENST00000517656 EVC2Q86UK5 1308 aa12.11□□□□□ -0.47
CTNNA1-204ENST00000517656 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
CTNNA1-204ENST00000517656 CAMTA1Q9Y6Y1 1673 aa12.1□□□□□ -0.47
CTNNA1-204ENST00000517656 ROCK2O75116 1388 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-204ENST00000517656 GCP02774 474 aa12.1□□□□□ -0.47
CTNNA1-204ENST00000517656 EVA1CP58658 441 aa12.1□□□□□ -0.47
CTNNA1-204ENST00000517656 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
CTNNA1-204ENST00000517656 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
CTNNA1-204ENST00000517656 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
CTNNA1-204ENST00000517656 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-204ENST00000517656 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.47
CTNNA1-204ENST00000517656 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
CTNNA1-204ENST00000517656 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
CTNNA1-204ENST00000517656 USP35Q9P2H5 1018 aa12.08□□□□□ -0.48
CTNNA1-204ENST00000517656 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-204ENST00000517656 SLIT3O75094 1523 aa12.07□□□□□ -0.48
CTNNA1-204ENST00000517656 NLRP6P59044 892 aa12.07□□□□□ -0.48
CTNNA1-204ENST00000517656 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-204ENST00000517656 TCP11L2Q8N4U5 519 aa12.07□□□□□ -0.48
CTNNA1-204ENST00000517656 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-204ENST00000517656 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
CTNNA1-204ENST00000517656 TNS1Q9HBL0 1735 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-204ENST00000517656 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
CTNNA1-204ENST00000517656 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-204ENST00000517656 CRB1P82279 1406 aa12.04□□□□□ -0.48
CTNNA1-204ENST00000517656 PIK3C2AO00443 1686 aa12.04□□□□□ -0.48
CTNNA1-204ENST00000517656 PSDA5PKW4 1024 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-204ENST00000517656 TRIM37O94972 964 aa12.04□□□□□ -0.48
CTNNA1-204ENST00000517656 TTC21BQ7Z4L5 1316 aa12.04□□□□□ -0.48
CTNNA1-204ENST00000517656 LRP5O75197 1615 aa12.04□□□□□ -0.48
CTNNA1-204ENST00000517656 PARD3Q8TEW0 1356 aa12.04□□□□□ -0.48
CTNNA1-204ENST00000517656 SBNO2Q9Y2G9 1366 aa12.04□□□□□ -0.48
CTNNA1-204ENST00000517656 ZBTB7CA1YPR0 619 aa12.03□□□□□ -0.48
CTNNA1-204ENST00000517656 EZH2Q15910 746 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-204ENST00000517656 CAMKK2Q96RR4 588 aa12.03□□□□□ -0.48
CTNNA1-204ENST00000517656 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
CTNNA1-204ENST00000517656 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-204ENST00000517656 APBA3O96018 575 aa12.02□□□□□ -0.49
CTNNA1-204ENST00000517656 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.49
CTNNA1-204ENST00000517656 PARP4Q9UKK3 1724 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-204ENST00000517656 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-204ENST00000517656 ARHGEF25Q86VW2 580 aa12.01□□□□□ -0.49
CTNNA1-204ENST00000517656 CARD11Q9BXL7 1154 aa12.01□□□□□ -0.49
CTNNA1-204ENST00000517656 KTN1Q86UP2 1357 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-204ENST00000517656 AKAP12Q02952 1782 aa12□□□□□ -0.49
CTNNA1-204ENST00000517656 R3HDM1Q15032 1099 aaKnown RBP12□□□□□ -0.49
CTNNA1-204ENST00000517656 TOM1L2Q6ZVM7 507 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms