RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 NGLY1Q96IV0 654 aa29.73■■■□□ 2.35
MTCL1-204ENST00000517554 SSH2Q76I76 1423 aa29.73■■■□□ 2.35
MTCL1-204ENST00000517554 CPSF1Q10570 1443 aaKnown RBP29.73■■■□□ 2.35
MTCL1-204ENST00000517554 PUS7Q96PZ0 661 aaKnown RBP29.73■■■□□ 2.35
MTCL1-204ENST00000517554 CD163L1Q9NR16 1453 aa29.71■■■□□ 2.35
MTCL1-204ENST00000517554 NUTM2GQ5VZR2 741 aa29.71■■■□□ 2.35
MTCL1-204ENST00000517554 MARF1Q9Y4F3 1742 aaKnown RBP29.71■■■□□ 2.35
MTCL1-204ENST00000517554 CRYBG1Q9Y4K1 1723 aa29.71■■■□□ 2.35
MTCL1-204ENST00000517554 ZNF772Q68DY9 489 aaPredicted RBP29.7■■■□□ 2.35
MTCL1-204ENST00000517554 FNBP4Q8N3X1 1017 aaPredicted RBP29.7■■■□□ 2.35
MTCL1-204ENST00000517554 SLC12A5Q9H2X9 1139 aa29.7■■■□□ 2.35
MTCL1-204ENST00000517554 AKAP12Q02952 1782 aa29.67■■■□□ 2.34
MTCL1-204ENST00000517554 BRD4O60885 1362 aaPredicted RBP29.67■■■□□ 2.34
MTCL1-204ENST00000517554 SLC24A1O60721 1099 aa29.66■■■□□ 2.34
MTCL1-204ENST00000517554 ABTB2Q8N961 1025 aa29.66■■■□□ 2.34
MTCL1-204ENST00000517554 TMC1Q8TDI8 760 aa29.66■■■□□ 2.34
MTCL1-204ENST00000517554 ZNF692Q9BU19 519 aaPredicted RBP29.66■■■□□ 2.34
MTCL1-204ENST00000517554 HAP1P54257 671 aaPredicted RBP29.65■■■□□ 2.34
MTCL1-204ENST00000517554 TMF1P82094 1093 aa29.65■■■□□ 2.34
MTCL1-204ENST00000517554 BCL9LQ86UU0 1499 aa29.65■■■□□ 2.34
MTCL1-204ENST00000517554 HSPA5P11021 654 aaKnown RBP29.63■■■□□ 2.33
MTCL1-204ENST00000517554 USP21Q9UK80 565 aa29.63■■■□□ 2.33
MTCL1-204ENST00000517554 KTN1Q86UP2 1357 aaKnown RBP29.63■■■□□ 2.33
MTCL1-204ENST00000517554 NRKQ7Z2Y5 1582 aa29.63■■■□□ 2.33
MTCL1-204ENST00000517554 TTC21BQ7Z4L5 1316 aa29.62■■■□□ 2.33
MTCL1-204ENST00000517554 SLIT2O94813 1529 aa29.62■■■□□ 2.33
MTCL1-204ENST00000517554 FAM83GA6ND36 823 aa29.61■■■□□ 2.33
MTCL1-204ENST00000517554 PHRF1Q9P1Y6 1649 aaKnown RBP29.61■■■□□ 2.33
MTCL1-204ENST00000517554 USP19O94966 1318 aa29.61■■■□□ 2.33
MTCL1-204ENST00000517554 EIF4G2P78344 907 aaKnown RBP eCLIP29.6■■■□□ 2.33
MTCL1-204ENST00000517554 QTRT2Q9H974 415 aaKnown RBP29.6■■■□□ 2.33
MTCL1-204ENST00000517554 MON2Q7Z3U7 1717 aa29.6■■■□□ 2.33
MTCL1-204ENST00000517554 PIK3C2AO00443 1686 aa29.6■■■□□ 2.33
MTCL1-204ENST00000517554 A0A1W2PP64 1363 aa29.59■■■□□ 2.33
MTCL1-204ENST00000517554 NLRP13Q86W25 1043 aa29.56■■■□□ 2.32
MTCL1-204ENST00000517554 NLRP6P59044 892 aa29.56■■■□□ 2.32
MTCL1-204ENST00000517554 NINLQ9Y2I6 1382 aa29.55■■■□□ 2.32
MTCL1-204ENST00000517554 ATRNO75882 1429 aa29.55■■■□□ 2.32
MTCL1-204ENST00000517554 TTC21AQ8NDW8 1320 aa29.55■■■□□ 2.32
MTCL1-204ENST00000517554 PLCH1Q4KWH8 1693 aa29.54■■■□□ 2.32
MTCL1-204ENST00000517554 RXRBP28702 533 aa29.54■■■□□ 2.32
MTCL1-204ENST00000517554 HDGFL2Q7Z4V5 671 aaPredicted RBP29.54■■■□□ 2.32
MTCL1-204ENST00000517554 TERF2IPQ9NYB0 399 aa29.54■■■□□ 2.32
MTCL1-204ENST00000517554 KIAA0232Q92628 1395 aa29.54■■■□□ 2.32
MTCL1-204ENST00000517554 ZC3H6P61129 1189 aaKnown RBP29.53■■■□□ 2.32
MTCL1-204ENST00000517554 UNC5CLQ8IV45 518 aa29.53■■■□□ 2.32
MTCL1-204ENST00000517554 GCP02774 474 aa29.52■■■□□ 2.32
MTCL1-204ENST00000517554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.52■■■□□ 2.32
MTCL1-204ENST00000517554 ZRANB1Q9UGI0 708 aa29.52■■■□□ 2.32
MTCL1-204ENST00000517554 TRPC5Q9UL62 973 aaPredicted RBP29.52■■■□□ 2.32
MTCL1-204ENST00000517554 SLIT3O75094 1523 aa29.51■■■□□ 2.31
MTCL1-204ENST00000517554 CDCA8Q53HL2 280 aa29.51■■■□□ 2.31
MTCL1-204ENST00000517554 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.5■■■□□ 2.31
MTCL1-204ENST00000517554 EDC4Q6P2E9 1401 aaKnown RBP29.5■■■□□ 2.31
MTCL1-204ENST00000517554 RBM6P78332 1123 aaKnown RBP29.5■■■□□ 2.31
MTCL1-204ENST00000517554 PRDM11Q9NQV5 511 aa29.5■■■□□ 2.31
MTCL1-204ENST00000517554 COL14A1Q05707 1796 aaKnown RBP29.49■■■□□ 2.31
MTCL1-204ENST00000517554 CHRNA2Q15822 529 aa29.49■■■□□ 2.31
MTCL1-204ENST00000517554 NME9Q86XW9 330 aa29.49■■■□□ 2.31
MTCL1-204ENST00000517554 NWD2Q9ULI1 1742 aa29.49■■■□□ 2.31
MTCL1-204ENST00000517554 ANKRD36BQ8N2N9 1353 aa29.49■■■□□ 2.31
MTCL1-204ENST00000517554 SOCS7O14512 581 aa29.48■■■□□ 2.31
MTCL1-204ENST00000517554 BTG4Q9NY30 223 aa29.48■■■□□ 2.31
MTCL1-204ENST00000517554 MYOM1P52179 1685 aa29.48■■■□□ 2.31
MTCL1-204ENST00000517554 C11orf95C9JLR9 678 aaPredicted RBP29.47■■■□□ 2.31
MTCL1-204ENST00000517554 CPDO75976 1380 aa29.47■■■□□ 2.31
MTCL1-204ENST00000517554 USP31Q70CQ4 1352 aa29.46■■■□□ 2.31
MTCL1-204ENST00000517554 NRAPQ86VF7 1730 aa29.46■■■□□ 2.31
MTCL1-204ENST00000517554 CDK12Q9NYV4 1490 aaPredicted RBP29.44■■■□□ 2.3
MTCL1-204ENST00000517554 GJD4Q96KN9 370 aaPredicted RBP29.43■■■□□ 2.3
MTCL1-204ENST00000517554 RGS12O14924 1447 aa29.43■■■□□ 2.3
MTCL1-204ENST00000517554 VPS72Q15906 364 aa29.43■■■□□ 2.3
MTCL1-204ENST00000517554 GLI3P10071 1580 aa29.42■■■□□ 2.3
MTCL1-204ENST00000517554 USP54Q70EL1 1684 aa29.41■■■□□ 2.3
MTCL1-204ENST00000517554 LMO7Q8WWI1 1683 aa29.4■■■□□ 2.3
MTCL1-204ENST00000517554 NFAT5O94916 1531 aa29.39■■■□□ 2.3
MTCL1-204ENST00000517554 CARD14Q9BXL6 1004 aa29.39■■■□□ 2.3
MTCL1-204ENST00000517554 CAMTA1Q9Y6Y1 1673 aa29.39■■■□□ 2.3
MTCL1-204ENST00000517554 POLR3GLQ9BT43 218 aa29.39■■■□□ 2.29
MTCL1-204ENST00000517554 OVOS2A0A0J9YW53 1432 aa29.39■■■□□ 2.29
MTCL1-204ENST00000517554 OVOS2Q6IE36 1432 aa29.39■■■□□ 2.29
MTCL1-204ENST00000517554 SOX12O15370 315 aa29.38■■■□□ 2.29
MTCL1-204ENST00000517554 ARHGEF25Q86VW2 580 aa29.36■■■□□ 2.29
MTCL1-204ENST00000517554 KCNH5Q8NCM2 988 aa29.36■■■□□ 2.29
MTCL1-204ENST00000517554 ZBTB7CA1YPR0 619 aa29.34■■■□□ 2.29
MTCL1-204ENST00000517554 COL18A1P39060 1754 aa29.34■■■□□ 2.29
MTCL1-204ENST00000517554 AATKQ6ZMQ8 1374 aa29.34■■■□□ 2.29
MTCL1-204ENST00000517554 FYB1O15117 783 aa29.33■■■□□ 2.29
MTCL1-204ENST00000517554 STRN4Q9NRL3 753 aa29.32■■■□□ 2.28
MTCL1-204ENST00000517554 AXIN2Q9Y2T1 843 aa29.32■■■□□ 2.28
MTCL1-204ENST00000517554 CCDC9Q9Y3X0 531 aaKnown RBP29.32■■■□□ 2.28
MTCL1-204ENST00000517554 SPATA31A5Q5VU36 1347 aa29.31■■■□□ 2.28
MTCL1-204ENST00000517554 SPATA31A7Q8IWB4 1347 aa29.31■■■□□ 2.28
MTCL1-204ENST00000517554 NSD3Q9BZ95 1437 aa29.3■■■□□ 2.28
MTCL1-204ENST00000517554 COL5A2P05997 1499 aaPredicted RBP29.29■■■□□ 2.28
MTCL1-204ENST00000517554 KIF7Q2M1P5 1343 aa29.29■■■□□ 2.28
MTCL1-204ENST00000517554 GGNBP2Q9H3C7 697 aa29.29■■■□□ 2.28
MTCL1-204ENST00000517554 ONECUT3O60422 494 aaPredicted RBP29.28■■■□□ 2.28
MTCL1-204ENST00000517554 LARP1Q6PKG0 1096 aaKnown RBP29.28■■■□□ 2.28
MTCL1-204ENST00000517554 FBLN1P23142 703 aa29.26■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms