RNA–Protein interactions for RNA: ENST00000517553.1

TRAPPC2-205, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 475 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-205ENST00000517553 ERBB4Q15303 1308 aa5.83□□□□□ -1.48
TRAPPC2-205ENST00000517553 USP46P62068 366 aa5.83□□□□□ -1.48
TRAPPC2-205ENST00000517553 PCMTD1Q96MG8 357 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC2-205ENST00000517553 GJA5P36382 358 aa5.82□□□□□ -1.48
TRAPPC2-205ENST00000517553 SKOR1P84550 965 aa5.82□□□□□ -1.48
TRAPPC2-205ENST00000517553 SKIV2LQ15477 1246 aaKnown RBP5.82□□□□□ -1.48
TRAPPC2-205ENST00000517553 MSS51Q4VC12 460 aa5.82□□□□□ -1.48
TRAPPC2-205ENST00000517553 NUTM1Q86Y26 1132 aa5.82□□□□□ -1.48
TRAPPC2-205ENST00000517553 SALL2Q9Y467 1007 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC2-205ENST00000517553 TUSC1Q2TAM9 212 aa5.81□□□□□ -1.48
TRAPPC2-205ENST00000517553 GRIPAP1Q4V328 841 aa5.81□□□□□ -1.48
TRAPPC2-205ENST00000517553 TRIM46Q7Z4K8 759 aa5.81□□□□□ -1.48
TRAPPC2-205ENST00000517553 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
TRAPPC2-205ENST00000517553 CAPN5O15484 640 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC2-205ENST00000517553 CLK2P49760 499 aaKnown RBP5.8□□□□□ -1.48
TRAPPC2-205ENST00000517553 GPAT2Q6NUI2 795 aa5.8□□□□□ -1.48
TRAPPC2-205ENST00000517553 TBC1D2Q9BYX2 928 aa5.8□□□□□ -1.48
TRAPPC2-205ENST00000517553 KDM4AO75164 1064 aa5.79□□□□□ -1.48
TRAPPC2-205ENST00000517553 MMP16P51512 607 aa5.79□□□□□ -1.48
TRAPPC2-205ENST00000517553 MYSM1Q5VVJ2 828 aa5.79□□□□□ -1.48
TRAPPC2-205ENST00000517553 SPIRE2Q8WWL2 714 aa5.79□□□□□ -1.48
TRAPPC2-205ENST00000517553 H3BM21 787 aa5.78□□□□□ -1.48
TRAPPC2-205ENST00000517553 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
TRAPPC2-205ENST00000517553 SOBPA7XYQ1 873 aa5.77□□□□□ -1.49
TRAPPC2-205ENST00000517553 SPTLC1O15269 473 aa5.77□□□□□ -1.49
TRAPPC2-205ENST00000517553 ZFP42Q96MM3 310 aa5.77□□□□□ -1.49
TRAPPC2-205ENST00000517553 USB1Q9BQ65 265 aaKnown RBP5.77□□□□□ -1.49
TRAPPC2-205ENST00000517553 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.77□□□□□ -1.49
TRAPPC2-205ENST00000517553 WASF2Q9Y6W5 498 aa5.77□□□□□ -1.49
TRAPPC2-205ENST00000517553 HOXA2O43364 376 aa5.76□□□□□ -1.49
TRAPPC2-205ENST00000517553 Q3C1V9 767 aa5.76□□□□□ -1.49
TRAPPC2-205ENST00000517553 PRPF38BQ5VTL8 546 aaKnown RBP5.76□□□□□ -1.49
TRAPPC2-205ENST00000517553 RSBN1LQ6PCB5 846 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC2-205ENST00000517553 RIC3Q7Z5B4 369 aa5.76□□□□□ -1.49
TRAPPC2-205ENST00000517553 NPAS3Q8IXF0 933 aa5.76□□□□□ -1.49
TRAPPC2-205ENST00000517553 HLA-CQ95604 372 aa5.76□□□□□ -1.49
TRAPPC2-205ENST00000517553 SIAH2O43255 324 aa5.75□□□□□ -1.49
TRAPPC2-205ENST00000517553 DXOO77932 396 aaKnown RBP5.75□□□□□ -1.49
TRAPPC2-205ENST00000517553 WNT7BP56706 349 aa5.75□□□□□ -1.49
TRAPPC2-205ENST00000517553 FLIIQ13045 1269 aa5.75□□□□□ -1.49
TRAPPC2-205ENST00000517553 PPP2R2DQ66LE6 453 aa5.75□□□□□ -1.49
TRAPPC2-205ENST00000517553 PTCRAQ6ISU1 281 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC2-205ENST00000517553 EHBP1Q8NDI1 1231 aa5.75□□□□□ -1.49
TRAPPC2-205ENST00000517553 SPDYE5A6NIY4 337 aa5.74□□□□□ -1.49
TRAPPC2-205ENST00000517553 ADAM23O75077 832 aa5.74□□□□□ -1.49
TRAPPC2-205ENST00000517553 SYMPKQ92797 1274 aaKnown RBP5.74□□□□□ -1.49
TRAPPC2-205ENST00000517553 ATP1B4Q9UN42 357 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC2-205ENST00000517553 MOXD2PA6NHM9 499 aa5.73□□□□□ -1.49
TRAPPC2-205ENST00000517553 SOCS7O14512 581 aa5.73□□□□□ -1.49
TRAPPC2-205ENST00000517553 ZBTB3Q9H5J0 574 aa5.73□□□□□ -1.49
TRAPPC2-205ENST00000517553 POLR3EQ9NVU0 708 aa5.73□□□□□ -1.49
TRAPPC2-205ENST00000517553 IGHA1P01876 353 aa5.72□□□□□ -1.49
TRAPPC2-205ENST00000517553 FDX1P10109 184 aa5.72□□□□□ -1.49
TRAPPC2-205ENST00000517553 TMEM259Q4ZIN3 620 aa5.72□□□□□ -1.49
TRAPPC2-205ENST00000517553 BANK1Q8NDB2 785 aa5.72□□□□□ -1.49
TRAPPC2-205ENST00000517553 PURBQ96QR8 312 aaKnown RBP5.72□□□□□ -1.49
TRAPPC2-205ENST00000517553 LIMD1Q9UGP4 676 aa5.72□□□□□ -1.49
TRAPPC2-205ENST00000517553 APBB1O00213 710 aa5.71□□□□□ -1.5
TRAPPC2-205ENST00000517553 LILRB3O75022 631 aa5.71□□□□□ -1.5
TRAPPC2-205ENST00000517553 GUCA2AQ02747 115 aa5.71□□□□□ -1.5
TRAPPC2-205ENST00000517553 NDUFV2P19404 249 aa5.7□□□□□ -1.5
TRAPPC2-205ENST00000517553 RFC5P40937 340 aa5.7□□□□□ -1.5
TRAPPC2-205ENST00000517553 MTMR2Q13614 643 aa5.7□□□□□ -1.5
TRAPPC2-205ENST00000517553 C14orf37Q86TY3 774 aa5.7□□□□□ -1.5
TRAPPC2-205ENST00000517553 PROCA1Q8NCQ7 364 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC2-205ENST00000517553 BTBD11A6QL63 1104 aa5.69□□□□□ -1.5
TRAPPC2-205ENST00000517553 SH3BP2P78314 561 aa5.69□□□□□ -1.5
TRAPPC2-205ENST00000517553 Q8N3U1 123 aa5.69□□□□□ -1.5
TRAPPC2-205ENST00000517553 NUTM2BA6NNL0 878 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 NUTM2EB1AL46 878 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 SCARF1Q14162 830 aa5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 LINC01559Q495D7 138 aa5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 NUTM2DQ5VT03 806 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 MRPL14Q6P1L8 145 aaKnown RBP5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 NUTM2AQ8IVF1 878 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 HELBQ8NG08 1087 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 NUDT12Q9BQG2 462 aa5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 DNMT3AQ9Y6K1 912 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 TLL2Q9Y6L7 1015 aa5.68□□□□□ -1.5
TRAPPC2-205ENST00000517553 JUNDP17535 347 aa5.67□□□□□ -1.5
TRAPPC2-205ENST00000517553 HRCP23327 699 aa5.67□□□□□ -1.5
TRAPPC2-205ENST00000517553 RETREG3Q86VR2 466 aa5.67□□□□□ -1.5
TRAPPC2-205ENST00000517553 PRM3Q9NNZ6 103 aa5.67□□□□□ -1.5
TRAPPC2-205ENST00000517553 TIMELESSQ9UNS1 1208 aa5.67□□□□□ -1.5
TRAPPC2-205ENST00000517553 C6orf229H3BNL8 230 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 WDR4P57081 412 aaKnown RBP5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 MCM6Q14566 821 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 QPCTQ16769 361 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 CSPP1Q1MSJ5 1256 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 C6orf118Q5T5N4 469 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 DESI1Q6ICB0 168 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 BAP1Q92560 729 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 PCDHGC3Q9UN70 934 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 ADAMTS8Q9UP79 889 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 PCDHB15Q9Y5E8 787 aa5.66□□□□□ -1.5
TRAPPC2-205ENST00000517553 RNF225M0QZC1 329 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC2-205ENST00000517553 NNTQ13423 1086 aa5.65□□□□□ -1.5
TRAPPC2-205ENST00000517553 MAN1A2O60476 641 aa5.64□□□□□ -1.51
TRAPPC2-205ENST00000517553 PPFIA3O75145 1194 aa5.64□□□□□ -1.51
TRAPPC2-205ENST00000517553 UBTFP17480 764 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms