RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ASXL2Q76L83 1435 aa13.31□□□□□ -0.28
PCDHGA1-202ENST00000517417 ST18O60284 1047 aa13.31□□□□□ -0.28
PCDHGA1-202ENST00000517417 HSP90B1P14625 803 aaKnown RBP13.31□□□□□ -0.28
PCDHGA1-202ENST00000517417 KIF16BQ96L93 1317 aa13.31□□□□□ -0.28
PCDHGA1-202ENST00000517417 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
PCDHGA1-202ENST00000517417 FKBP5Q13451 457 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA1-202ENST00000517417 GRPEL1Q9HAV7 217 aa13.3□□□□□ -0.28
PCDHGA1-202ENST00000517417 PCDHB15Q9Y5E8 787 aa13.3□□□□□ -0.28
PCDHGA1-202ENST00000517417 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
PCDHGA1-202ENST00000517417 NOB1Q9ULX3 412 aaKnown RBP13.3□□□□□ -0.28
PCDHGA1-202ENST00000517417 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA1-202ENST00000517417 GPRASP1Q5JY77 1395 aa13.29□□□□□ -0.28
PCDHGA1-202ENST00000517417 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
PCDHGA1-202ENST00000517417 EIF2AK4Q9P2K8 1649 aaKnown RBP13.29□□□□□ -0.28
PCDHGA1-202ENST00000517417 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
PCDHGA1-202ENST00000517417 ZCCHC11Q5TAX3 1644 aaKnown RBP13.29□□□□□ -0.28
PCDHGA1-202ENST00000517417 TOMM22Q9NS69 142 aa13.28□□□□□ -0.28
PCDHGA1-202ENST00000517417 C9orf78Q9NZ63 289 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA1-202ENST00000517417 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
PCDHGA1-202ENST00000517417 CHAF1AQ13111 956 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA1-202ENST00000517417 PLCH2O75038 1416 aa13.28□□□□□ -0.28
PCDHGA1-202ENST00000517417 TRAPPC8Q9Y2L5 1435 aa13.28□□□□□ -0.28
PCDHGA1-202ENST00000517417 RAPGEF3O95398 923 aa13.28□□□□□ -0.28
PCDHGA1-202ENST00000517417 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.28
PCDHGA1-202ENST00000517417 TNNQ9UQP3 1299 aa13.27□□□□□ -0.28
PCDHGA1-202ENST00000517417 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.28
PCDHGA1-202ENST00000517417 ARID3AQ99856 593 aa13.27□□□□□ -0.29
PCDHGA1-202ENST00000517417 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.29
PCDHGA1-202ENST00000517417 NLRP6P59044 892 aa13.27□□□□□ -0.29
PCDHGA1-202ENST00000517417 ARHGEF5Q12774 1597 aa13.26□□□□□ -0.29
PCDHGA1-202ENST00000517417 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
PCDHGA1-202ENST00000517417 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA1-202ENST00000517417 EVA1CP58658 441 aa13.26□□□□□ -0.29
PCDHGA1-202ENST00000517417 SYAP1Q96A49 352 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA1-202ENST00000517417 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
PCDHGA1-202ENST00000517417 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
PCDHGA1-202ENST00000517417 GNAI1P63096 354 aa13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 FANCAO15360 1455 aa13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 CT47B1P0C2W7 299 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 RLBP1P12271 317 aa13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 NASPP49321 788 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 C1orf115Q9H7X2 142 aa13.25□□□□□ -0.29
PCDHGA1-202ENST00000517417 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 ESPNB1AK53 854 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 TMEM57Q8N5G2 664 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 MYO5CQ9NQX4 1742 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 UBE2Q2Q8WVN8 375 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 PANK2Q9BZ23 570 aa13.24□□□□□ -0.29
PCDHGA1-202ENST00000517417 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
PCDHGA1-202ENST00000517417 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
PCDHGA1-202ENST00000517417 SSH1Q8WYL5 1049 aa13.23□□□□□ -0.29
PCDHGA1-202ENST00000517417 UHRF1BP1LA0JNW5 1464 aa13.23□□□□□ -0.29
PCDHGA1-202ENST00000517417 CHD1LQ86WJ1 897 aa13.22□□□□□ -0.29
PCDHGA1-202ENST00000517417 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA1-202ENST00000517417 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
PCDHGA1-202ENST00000517417 CDC45O75419 566 aa13.22□□□□□ -0.29
PCDHGA1-202ENST00000517417 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA1-202ENST00000517417 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
PCDHGA1-202ENST00000517417 CABP1Q9NZU7 370 aa13.22□□□□□ -0.29
PCDHGA1-202ENST00000517417 MAGI2Q86UL8 1455 aa13.21□□□□□ -0.29
PCDHGA1-202ENST00000517417 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
PCDHGA1-202ENST00000517417 TRIM27P14373 513 aa13.21□□□□□ -0.29
PCDHGA1-202ENST00000517417 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.29
PCDHGA1-202ENST00000517417 ZNF521Q96K83 1311 aa13.21□□□□□ -0.3
PCDHGA1-202ENST00000517417 AIMP1Q12904 312 aaKnown RBP13.21□□□□□ -0.3
PCDHGA1-202ENST00000517417 RRAGDQ9NQL2 400 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA1-202ENST00000517417 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA1-202ENST00000517417 K7ELQ4 463 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA1-202ENST00000517417 TMPOP42166 694 aaKnown RBP13.2□□□□□ -0.3
PCDHGA1-202ENST00000517417 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
PCDHGA1-202ENST00000517417 DUOX2Q9NRD8 1548 aa13.2□□□□□ -0.3
PCDHGA1-202ENST00000517417 REC8O95072 547 aa13.2□□□□□ -0.3
PCDHGA1-202ENST00000517417 NUCB2P80303 420 aa13.2□□□□□ -0.3
PCDHGA1-202ENST00000517417 KDM5DQ9BY66 1539 aa13.2□□□□□ -0.3
PCDHGA1-202ENST00000517417 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 GCC1Q96CN9 775 aa13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 IFIT2P09913 472 aaKnown RBP13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 CCDC173Q0VFZ6 552 aa13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 CLSTN1O94985 981 aa13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 CAVIN1Q6NZI2 390 aaKnown RBP13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
PCDHGA1-202ENST00000517417 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
PCDHGA1-202ENST00000517417 TRMT2AQ8IZ69 625 aaKnown RBP13.18□□□□□ -0.3
PCDHGA1-202ENST00000517417 NPC1L1Q9UHC9 1359 aa13.18□□□□□ -0.3
PCDHGA1-202ENST00000517417 INTS3Q68E01 1043 aaKnown RBP13.17□□□□□ -0.3
PCDHGA1-202ENST00000517417 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
PCDHGA1-202ENST00000517417 SLC26A8Q96RN1 970 aa13.17□□□□□ -0.3
PCDHGA1-202ENST00000517417 TPM2P07951 284 aa13.17□□□□□ -0.3
PCDHGA1-202ENST00000517417 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
PCDHGA1-202ENST00000517417 H3BQV1 296 aa13.17□□□□□ -0.3
PCDHGA1-202ENST00000517417 IFFO2Q5TF58 517 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms