RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 PLEKHF1Q96S99 279 aa21.65■■□□□ 1.06
CHMP7-203ENST00000517325 RARSP54136 660 aaKnown RBP21.64■■□□□ 1.05
CHMP7-203ENST00000517325 PDE3AQ14432 1141 aa21.64■■□□□ 1.05
CHMP7-203ENST00000517325 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.64■■□□□ 1.05
CHMP7-203ENST00000517325 ATP7BP35670 1465 aa21.64■■□□□ 1.05
CHMP7-203ENST00000517325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
CHMP7-203ENST00000517325 PANK1Q8TE04 598 aa21.62■■□□□ 1.05
CHMP7-203ENST00000517325 CANXP27824 592 aaKnown RBP21.61■■□□□ 1.05
CHMP7-203ENST00000517325 PNPLA6Q8IY17 1366 aa21.61■■□□□ 1.05
CHMP7-203ENST00000517325 TNRQ92752 1358 aa21.61■■□□□ 1.05
CHMP7-203ENST00000517325 LAS1LQ9Y4W2 734 aaKnown RBP21.61■■□□□ 1.05
CHMP7-203ENST00000517325 TXNDC2Q86VQ3 553 aa21.6■■□□□ 1.05
CHMP7-203ENST00000517325 FRAT1Q92837 279 aaPredicted RBP21.6■■□□□ 1.05
CHMP7-203ENST00000517325 WASLO00401 505 aaPredicted RBP21.59■■□□□ 1.05
CHMP7-203ENST00000517325 MYH16Q9H6N6 1097 aa21.59■■□□□ 1.05
CHMP7-203ENST00000517325 TMPOP42166 694 aaKnown RBP21.59■■□□□ 1.05
CHMP7-203ENST00000517325 COG6Q9Y2V7 657 aa21.59■■□□□ 1.05
CHMP7-203ENST00000517325 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
CHMP7-203ENST00000517325 FBLN1P23142 703 aa21.58■■□□□ 1.05
CHMP7-203ENST00000517325 BCL2L13Q9BXK5 485 aa21.58■■□□□ 1.04
CHMP7-203ENST00000517325 TRIM35Q9UPQ4 493 aa21.57■■□□□ 1.04
CHMP7-203ENST00000517325 MAPK8IP3Q9UPT6 1336 aa21.57■■□□□ 1.04
CHMP7-203ENST00000517325 PPIP5K1Q6PFW1 1433 aa21.57■■□□□ 1.04
CHMP7-203ENST00000517325 CPSF1Q10570 1443 aaKnown RBP21.56■■□□□ 1.04
CHMP7-203ENST00000517325 KNDC1Q76NI1 1749 aa21.56■■□□□ 1.04
CHMP7-203ENST00000517325 TECPR2O15040 1411 aa21.56■■□□□ 1.04
CHMP7-203ENST00000517325 TNNQ9UQP3 1299 aa21.56■■□□□ 1.04
CHMP7-203ENST00000517325 TMEM2Q9UHN6 1383 aa21.56■■□□□ 1.04
CHMP7-203ENST00000517325 UBR1Q8IWV7 1749 aa21.55■■□□□ 1.04
CHMP7-203ENST00000517325 TSR2Q969E8 191 aaKnown RBP21.55■■□□□ 1.04
CHMP7-203ENST00000517325 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
CHMP7-203ENST00000517325 IGHDP01880 384 aa21.55■■□□□ 1.04
CHMP7-203ENST00000517325 CLUAP1Q96AJ1 413 aa21.55■■□□□ 1.04
CHMP7-203ENST00000517325 POLKQ9UBT6 870 aa21.55■■□□□ 1.04
CHMP7-203ENST00000517325 HDGFP51858 240 aaKnown RBP21.54■■□□□ 1.04
CHMP7-203ENST00000517325 RLBP1P12271 317 aa21.54■■□□□ 1.04
CHMP7-203ENST00000517325 CPS1P31327 1500 aa21.53■■□□□ 1.04
CHMP7-203ENST00000517325 EDC4Q6P2E9 1401 aaKnown RBP21.53■■□□□ 1.04
CHMP7-203ENST00000517325 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
CHMP7-203ENST00000517325 CDC42BPGQ6DT37 1551 aa21.53■■□□□ 1.04
CHMP7-203ENST00000517325 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
CHMP7-203ENST00000517325 NEFMP07197 916 aa21.52■■□□□ 1.04
CHMP7-203ENST00000517325 NUDT16Q96DE0 195 aaKnown RBP21.52■■□□□ 1.04
CHMP7-203ENST00000517325 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
CHMP7-203ENST00000517325 NME9Q86XW9 330 aa21.51■■□□□ 1.03
CHMP7-203ENST00000517325 LRRC7Q96NW7 1537 aa21.51■■□□□ 1.03
CHMP7-203ENST00000517325 RGS3P49796 1198 aa21.51■■□□□ 1.03
CHMP7-203ENST00000517325 RIPK4P57078 832 aa21.5■■□□□ 1.03
CHMP7-203ENST00000517325 ZRANB1Q9UGI0 708 aa21.5■■□□□ 1.03
CHMP7-203ENST00000517325 ADAMTS13Q76LX8 1427 aa21.49■■□□□ 1.03
CHMP7-203ENST00000517325 EXOSC9Q06265 439 aaKnown RBP21.49■■□□□ 1.03
CHMP7-203ENST00000517325 ROBO2Q9HCK4 1378 aa21.49■■□□□ 1.03
CHMP7-203ENST00000517325 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.49■■□□□ 1.03
CHMP7-203ENST00000517325 CCDC61Q9Y6R9 512 aa21.49■■□□□ 1.03
CHMP7-203ENST00000517325 MAP2P11137 1827 aaKnown RBP21.49■■□□□ 1.03
CHMP7-203ENST00000517325 EMILIN1Q9Y6C2 1016 aa21.48■■□□□ 1.03
CHMP7-203ENST00000517325 FCHSD2O94868 740 aa21.48■■□□□ 1.03
CHMP7-203ENST00000517325 RSPH6AQ9H0K4 717 aa21.48■■□□□ 1.03
CHMP7-203ENST00000517325 C8orf34Q49A92 452 aa21.47■■□□□ 1.03
CHMP7-203ENST00000517325 PNNQ9H307 717 aaKnown RBP21.47■■□□□ 1.03
CHMP7-203ENST00000517325 IL16Q14005 1332 aa21.47■■□□□ 1.03
CHMP7-203ENST00000517325 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
CHMP7-203ENST00000517325 MON2Q7Z3U7 1717 aa21.47■■□□□ 1.03
CHMP7-203ENST00000517325 PRR36Q9H6K5 1346 aa21.47■■□□□ 1.03
CHMP7-203ENST00000517325 LTKP29376 864 aa21.46■■□□□ 1.03
CHMP7-203ENST00000517325 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
CHMP7-203ENST00000517325 FAM161AQ3B820 660 aa21.46■■□□□ 1.03
CHMP7-203ENST00000517325 CEBPAP49715 358 aaPredicted RBP21.45■■□□□ 1.02
CHMP7-203ENST00000517325 PCDHB15Q9Y5E8 787 aa21.44■■□□□ 1.02
CHMP7-203ENST00000517325 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
CHMP7-203ENST00000517325 HMOX1P09601 288 aa21.43■■□□□ 1.02
CHMP7-203ENST00000517325 AAMPQ13685 434 aa21.43■■□□□ 1.02
CHMP7-203ENST00000517325 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
CHMP7-203ENST00000517325 SMC4Q9NTJ3 1288 aa21.43■■□□□ 1.02
CHMP7-203ENST00000517325 PLEKHG1Q9ULL1 1385 aa21.43■■□□□ 1.02
CHMP7-203ENST00000517325 CDK12Q9NYV4 1490 aaPredicted RBP21.43■■□□□ 1.02
CHMP7-203ENST00000517325 C3P01024 1663 aa21.43■■□□□ 1.02
CHMP7-203ENST00000517325 AATKQ6ZMQ8 1374 aa21.43■■□□□ 1.02
CHMP7-203ENST00000517325 SSH1Q8WYL5 1049 aa21.42■■□□□ 1.02
CHMP7-203ENST00000517325 IL13P35225 146 aa21.42■■□□□ 1.02
CHMP7-203ENST00000517325 COG3Q96JB2 828 aa21.42■■□□□ 1.02
CHMP7-203ENST00000517325 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
CHMP7-203ENST00000517325 ITSN1Q15811 1721 aa21.41■■□□□ 1.02
CHMP7-203ENST00000517325 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
CHMP7-203ENST00000517325 MVPQ14764 893 aaKnown RBP21.41■■□□□ 1.02
CHMP7-203ENST00000517325 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
CHMP7-203ENST00000517325 DZIP1LQ8IYY4 767 aaKnown RBP21.4■■□□□ 1.02
CHMP7-203ENST00000517325 PMFBP1Q8TBY8 1022 aa21.4■■□□□ 1.02
CHMP7-203ENST00000517325 FTSJ3Q8IY81 847 aaKnown RBP21.39■■□□□ 1.01
CHMP7-203ENST00000517325 TRIM27P14373 513 aa21.38■■□□□ 1.01
CHMP7-203ENST00000517325 ZNF692Q9BU19 519 aaPredicted RBP21.38■■□□□ 1.01
CHMP7-203ENST00000517325 PTPRUQ92729 1446 aa21.38■■□□□ 1.01
CHMP7-203ENST00000517325 NFE2L2Q16236 605 aa21.38■■□□□ 1.01
CHMP7-203ENST00000517325 SLC26A8Q96RN1 970 aa21.38■■□□□ 1.01
CHMP7-203ENST00000517325 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
CHMP7-203ENST00000517325 THUMPD2Q9BTF0 503 aaKnown RBP21.35■■□□□ 1.01
CHMP7-203ENST00000517325 TOPAZ1Q8N9V7 1692 aa21.35■■□□□ 1.01
CHMP7-203ENST00000517325 ATF7IPQ6VMQ6 1270 aa21.35■■□□□ 1.01
CHMP7-203ENST00000517325 NOB1Q9ULX3 412 aaKnown RBP21.35■■□□□ 1.01
CHMP7-203ENST00000517325 NRKQ7Z2Y5 1582 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms