RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SCAPERQ9BY12 1400 aa3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 COL17A1Q9UMD9 1497 aaPredicted RBP3.35□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ZFYVE16Q7Z3T8 1539 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ARHGEF40Q8TER5 1519 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 PLXNC1O60486 1568 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 HECW2Q9P2P5 1572 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 INO80Q9ULG1 1556 aaPredicted RBP3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RCCD1A6NED2 376 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 MS4A1P11836 297 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ANKRD13DQ6ZTN6 518 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 C14orf37Q86TY3 774 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ZNF687Q8N1G0 1237 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RDH13Q8NBN7 331 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 BEGAINQ9BUH8 593 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 RSPH6AQ9H0K4 717 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 FAM198AQ9UFP1 575 aa3.34□□□□□ -1.87
SCARNA16.3-201ENST00000516595 ROCK1Q13464 1354 aa3.34□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ABCC5O15440 1437 aa3.34□□□□□ -1.88
SCARNA16.3-201ENST00000516595 DAPK1P53355 1430 aa3.34□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TRAPPC8Q9Y2L5 1435 aa3.34□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ATP7AQ04656 1500 aa3.34□□□□□ -1.88
SCARNA16.3-201ENST00000516595 FAM135AQ9P2D6 1515 aa3.34□□□□□ -1.88
SCARNA16.3-201ENST00000516595 CROCC2H7BZ55 1655 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 GOLGA8CPA6NN73 597 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ONECUT3O60422 494 aaPredicted RBP3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 RNF40O75150 1001 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 DNAJB2P25686 324 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 DMRTA1Q5VZB9 504 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 NUTM1Q86Y26 1132 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SULF1Q8IWU6 871 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TTC13Q8NBP0 860 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 PCMTD1Q96MG8 357 aaPredicted RBP3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 EYA1Q99502 592 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 FAM217BQ9NTX9 383 aaPredicted RBP3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 POLR3EQ9NVU0 708 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SEPT9Q9UHD8 586 aaPredicted RBP3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 C9orf84Q5VXU9 1444 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 AGLP35573 1532 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 DIP2CQ9Y2E4 1556 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 KIDINS220Q9ULH0 1771 aa3.33□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TSPY4P0CV99 314 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TSPY10P0CW01 314 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 PBX2P40425 430 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 MMRN1Q13201 1228 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ERICH6Q7L0X2 663 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 CDAN1Q8IWY9 1227 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 HS3ST6Q96QI5 342 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ZBED2Q9BTP6 218 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 NBPF3Q9H094 633 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 RABGEF1Q9UJ41 708 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 VPS9D1Q9Y2B5 631 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SPAG9O60271 1321 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ZNF644Q9H582 1327 aaPredicted RBP3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ACIN1Q9UKV3 1341 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ANKRD30AQ9BXX3 1397 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 HFM1A2PYH4 1435 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 NCOA1Q15788 1441 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ERBINQ96RT1 1412 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 DUOX2Q9NRD8 1548 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 EIF2AK4Q9P2K8 1649 aaKnown RBP3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 BCORL1Q5H9F3 1711 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TSPOAP1O95153 1857 aa3.32□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ADGBQ8N7X0 1667 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ABCA6Q8N139 1617 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ATP10AO60312 1499 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 A2MP01023 1474 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 PTPRKQ15262 1439 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 YEATS2Q9ULM3 1422 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 DHX29Q7Z478 1369 aaKnown RBP3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 KIF15Q9NS87 1388 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 PLEKHG3A1L390 1219 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 C3orf80F5H4A9 247 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 RAPGEF3O95398 923 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 HNRNPMP52272 730 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 DIXDC1Q155Q3 683 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 AFAP1Q8N556 730 aa3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 MRPL50Q8N5N7 158 aaKnown RBP3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ZNF777Q9ULD5 760 aaPredicted RBP3.31□□□□□ -1.88
SCARNA16.3-201ENST00000516595 GCC2Q8IWJ2 1684 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 PRDM15P57071 1507 aaPredicted RBP3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 KDM5DQ9BY66 1539 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 NAIPQ13075 1403 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 ANKRD50Q9ULJ7 1429 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 HRCP23327 699 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SKIV2LQ15477 1246 aaKnown RBP3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 FAM98CQ17RN3 349 aaKnown RBP3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 CSPP1Q1MSJ5 1256 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 SWT1Q5T5J6 900 aaKnown RBP3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 POTEEQ6S8J3 1075 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TMUB1Q9BVT8 246 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TBC1D2Q9BYX2 928 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 TMEM134Q9H6X4 195 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 DEPDC5O75140 1603 aa3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 RNF17Q9BXT8 1623 aaKnown RBP3.3□□□□□ -1.88
SCARNA16.3-201ENST00000516595 VWDEQ8N2E2 1590 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 LMTK2Q8IWU2 1503 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 POTEB3A0JP26 581 aa3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 NUTM2BA6NNL0 878 aaPredicted RBP3.29□□□□□ -1.88
SCARNA16.3-201ENST00000516595 NUTM2EB1AL46 878 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms