RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 PLEKHG3A1L390 1219 aa6.67□□□□□ -1.34
RNU2-53P-201ENST00000516257 NDUFV2P19404 249 aa6.67□□□□□ -1.34
RNU2-53P-201ENST00000516257 KCTD17Q8N5Z5 321 aa6.67□□□□□ -1.34
RNU2-53P-201ENST00000516257 KCNMA1Q12791 1236 aa6.66□□□□□ -1.34
RNU2-53P-201ENST00000516257 PRR7Q8TB68 274 aa6.66□□□□□ -1.34
RNU2-53P-201ENST00000516257 ZFAND3Q9H8U3 227 aa6.66□□□□□ -1.34
RNU2-53P-201ENST00000516257 C6orf118Q5T5N4 469 aa6.65□□□□□ -1.34
RNU2-53P-201ENST00000516257 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.34
RNU2-53P-201ENST00000516257 MOXD2PA6NHM9 499 aa6.64□□□□□ -1.35
RNU2-53P-201ENST00000516257 PPFIA3O75145 1194 aa6.64□□□□□ -1.35
RNU2-53P-201ENST00000516257 ZIC2O95409 532 aaPredicted RBP6.64□□□□□ -1.35
RNU2-53P-201ENST00000516257 ITPKCQ96DU7 683 aa6.64□□□□□ -1.35
RNU2-53P-201ENST00000516257 MAN1A2O60476 641 aa6.63□□□□□ -1.35
RNU2-53P-201ENST00000516257 NR3C2P08235 984 aa6.63□□□□□ -1.35
RNU2-53P-201ENST00000516257 FAM174AQ8TBP5 190 aa6.63□□□□□ -1.35
RNU2-53P-201ENST00000516257 FOXJ1Q92949 421 aa6.63□□□□□ -1.35
RNU2-53P-201ENST00000516257 ARID5BQ14865 1188 aa6.62□□□□□ -1.35
RNU2-53P-201ENST00000516257 KRI1Q8N9T8 703 aaKnown RBP6.62□□□□□ -1.35
RNU2-53P-201ENST00000516257 SSTR3P32745 418 aaPredicted RBP6.61□□□□□ -1.35
RNU2-53P-201ENST00000516257 CTHP32929 405 aa6.61□□□□□ -1.35
RNU2-53P-201ENST00000516257 PLCB2Q00722 1185 aa6.61□□□□□ -1.35
RNU2-53P-201ENST00000516257 KRT76Q01546 638 aa6.61□□□□□ -1.35
RNU2-53P-201ENST00000516257 MTMR2Q13614 643 aa6.61□□□□□ -1.35
RNU2-53P-201ENST00000516257 DESI1Q6ICB0 168 aa6.61□□□□□ -1.35
RNU2-53P-201ENST00000516257 CDK15Q96Q40 435 aa6.61□□□□□ -1.35
RNU2-53P-201ENST00000516257 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
RNU2-53P-201ENST00000516257 GPR161Q8N6U8 529 aaKnown RBP6.6□□□□□ -1.35
RNU2-53P-201ENST00000516257 MAP10Q9P2G4 905 aa6.6□□□□□ -1.35
RNU2-53P-201ENST00000516257 DNMT3LQ9UJW3 386 aa6.6□□□□□ -1.35
RNU2-53P-201ENST00000516257 BMP2P12643 396 aa6.59□□□□□ -1.35
RNU2-53P-201ENST00000516257 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
RNU2-53P-201ENST00000516257 TMEM151AQ8N4L1 468 aa6.59□□□□□ -1.35
RNU2-53P-201ENST00000516257 SOS2Q07890 1332 aaPredicted RBP6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 GDF11O95390 407 aa6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 F12P00748 615 aaPredicted RBP6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 GRM5P41594 1212 aa6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 RASSF7Q02833 373 aa6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 LYPD8Q6UX82 237 aa6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 MEIOBQ8N635 442 aa6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 CNTNAP3BQ96NU0 1288 aa6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 CNTNAP3Q9BZ76 1288 aa6.58□□□□□ -1.36
RNU2-53P-201ENST00000516257 SPDYE5A6NIY4 337 aa6.57□□□□□ -1.36
RNU2-53P-201ENST00000516257 CFAP99D6REC4 459 aa6.57□□□□□ -1.36
RNU2-53P-201ENST00000516257 NR5A1Q13285 461 aa6.57□□□□□ -1.36
RNU2-53P-201ENST00000516257 KDM2AQ9Y2K7 1162 aa6.57□□□□□ -1.36
RNU2-53P-201ENST00000516257 ADAMTS8Q9UP79 889 aa6.56□□□□□ -1.36
RNU2-53P-201ENST00000516257 TULP1O00294 542 aaPredicted RBP6.55□□□□□ -1.36
RNU2-53P-201ENST00000516257 UPP2O95045 317 aa6.55□□□□□ -1.36
RNU2-53P-201ENST00000516257 TTLL12Q14166 644 aaPredicted RBP6.55□□□□□ -1.36
RNU2-53P-201ENST00000516257 AGERQ15109 404 aa6.55□□□□□ -1.36
RNU2-53P-201ENST00000516257 PCDHB15Q9Y5E8 787 aa6.55□□□□□ -1.36
RNU2-53P-201ENST00000516257 FSHRP23945 695 aa6.54□□□□□ -1.36
RNU2-53P-201ENST00000516257 RSBN1LQ6PCB5 846 aaPredicted RBP6.54□□□□□ -1.36
RNU2-53P-201ENST00000516257 RNF225M0QZC1 329 aaPredicted RBP6.53□□□□□ -1.36
RNU2-53P-201ENST00000516257 ZNF385CQ66K41 422 aaPredicted RBP6.53□□□□□ -1.36
RNU2-53P-201ENST00000516257 GIGYF2Q6Y7W6 1299 aaKnown RBP6.53□□□□□ -1.36
RNU2-53P-201ENST00000516257 BEGAINQ9BUH8 593 aa6.53□□□□□ -1.36
RNU2-53P-201ENST00000516257 COL25A1Q9BXS0 654 aaPredicted RBP6.53□□□□□ -1.36
RNU2-53P-201ENST00000516257 SPTLC1O15269 473 aa6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 PER1O15534 1290 aaPredicted RBP6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 HRCP23327 699 aa6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 HAP1P54257 671 aaPredicted RBP6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 PTSQ03393 145 aa6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 RNFT1Q5M7Z0 435 aa6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 BPHLQ86WA6 291 aaPredicted RBP6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 CABLES1Q8TDN4 633 aa6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 WHAMMQ8TF30 809 aa6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 TBC1D2Q9BYX2 928 aa6.52□□□□□ -1.37
RNU2-53P-201ENST00000516257 FIGNL2A6NMB9 653 aa6.51□□□□□ -1.37
RNU2-53P-201ENST00000516257 TTLL8A6PVC2 850 aa6.51□□□□□ -1.37
RNU2-53P-201ENST00000516257 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.51□□□□□ -1.37
RNU2-53P-201ENST00000516257 SVOPQ8N4V2 548 aa6.51□□□□□ -1.37
RNU2-53P-201ENST00000516257 TSEN34Q9BSV6 310 aaKnown RBP6.51□□□□□ -1.37
RNU2-53P-201ENST00000516257 C1QTNF2Q9BXJ5 285 aa6.51□□□□□ -1.37
RNU2-53P-201ENST00000516257 GJA5P36382 358 aa6.5□□□□□ -1.37
RNU2-53P-201ENST00000516257 AMHR2Q16671 573 aa6.5□□□□□ -1.37
RNU2-53P-201ENST00000516257 ZBTB3Q9H5J0 574 aa6.5□□□□□ -1.37
RNU2-53P-201ENST00000516257 IRS1P35568 1242 aa6.49□□□□□ -1.37
RNU2-53P-201ENST00000516257 GPAT2Q6NUI2 795 aa6.49□□□□□ -1.37
RNU2-53P-201ENST00000516257 VASH1Q7L8A9 365 aaPredicted RBP6.49□□□□□ -1.37
RNU2-53P-201ENST00000516257 SH3RF1Q7Z6J0 888 aa6.49□□□□□ -1.37
RNU2-53P-201ENST00000516257 CCDC155Q8N6L0 562 aa6.49□□□□□ -1.37
RNU2-53P-201ENST00000516257 NANOS1Q8WY41 292 aaKnown RBP6.49□□□□□ -1.37
RNU2-53P-201ENST00000516257 CBLBQ13191 982 aa6.48□□□□□ -1.37
RNU2-53P-201ENST00000516257 CSPP1Q1MSJ5 1256 aa6.48□□□□□ -1.37
RNU2-53P-201ENST00000516257 MAP4K5Q9Y4K4 846 aa6.48□□□□□ -1.37
RNU2-53P-201ENST00000516257 MAGEB6P1A0A0J9YX57 407 aa6.47□□□□□ -1.37
RNU2-53P-201ENST00000516257 ARHGEF15O94989 841 aa6.47□□□□□ -1.37
RNU2-53P-201ENST00000516257 SH3BP5LQ7L8J4 393 aa6.47□□□□□ -1.37
RNU2-53P-201ENST00000516257 TRMT44Q8IYL2 757 aaKnown RBP6.47□□□□□ -1.37
RNU2-53P-201ENST00000516257 CCDC116Q8IYX3 515 aa6.47□□□□□ -1.37
RNU2-53P-201ENST00000516257 TSC1Q92574 1164 aa6.47□□□□□ -1.37
RNU2-53P-201ENST00000516257 EMILIN1Q9Y6C2 1016 aa6.47□□□□□ -1.37
RNU2-53P-201ENST00000516257 DNMT3AQ9Y6K1 912 aaPredicted RBP6.47□□□□□ -1.37
RNU2-53P-201ENST00000516257 SLC35F4A4IF30 521 aa6.46□□□□□ -1.38
RNU2-53P-201ENST00000516257 SLURP2P0DP57 97 aa6.46□□□□□ -1.38
RNU2-53P-201ENST00000516257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.46□□□□□ -1.38
RNU2-53P-201ENST00000516257 RIC3Q7Z5B4 369 aa6.46□□□□□ -1.38
RNU2-53P-201ENST00000516257 VWA5B2Q8N398 1253 aa6.46□□□□□ -1.38
RNU2-53P-201ENST00000516257 CARD14Q9BXL6 1004 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms