RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 PPIP5K1Q6PFW1 1433 aa15.85■□□□□ 0.13
SCARNA16.1-201ENST00000516133 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
SCARNA16.1-201ENST00000516133 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
SCARNA16.1-201ENST00000516133 BRD4O60885 1362 aaPredicted RBP15.82■□□□□ 0.12
SCARNA16.1-201ENST00000516133 ATAD2Q6PL18 1390 aa15.81■□□□□ 0.12
SCARNA16.1-201ENST00000516133 UNC5CLQ8IV45 518 aa15.81■□□□□ 0.12
SCARNA16.1-201ENST00000516133 ABTB2Q8N961 1025 aa15.81■□□□□ 0.12
SCARNA16.1-201ENST00000516133 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
SCARNA16.1-201ENST00000516133 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
SCARNA16.1-201ENST00000516133 TOPAZ1Q8N9V7 1692 aa15.79■□□□□ 0.12
SCARNA16.1-201ENST00000516133 BCL9LQ86UU0 1499 aa15.79■□□□□ 0.12
SCARNA16.1-201ENST00000516133 ST20-MTHFSA0A0A6YYL1 179 aa15.79■□□□□ 0.12
SCARNA16.1-201ENST00000516133 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
SCARNA16.1-201ENST00000516133 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
SCARNA16.1-201ENST00000516133 NLRP13Q86W25 1043 aa15.78■□□□□ 0.12
SCARNA16.1-201ENST00000516133 ALS2Q96Q42 1657 aa15.78■□□□□ 0.12
SCARNA16.1-201ENST00000516133 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.12
SCARNA16.1-201ENST00000516133 NUTM2GQ5VZR2 741 aa15.77■□□□□ 0.12
SCARNA16.1-201ENST00000516133 GJD4Q96KN9 370 aaPredicted RBP15.77■□□□□ 0.12
SCARNA16.1-201ENST00000516133 SLIT2O94813 1529 aa15.77■□□□□ 0.11
SCARNA16.1-201ENST00000516133 ATRNO75882 1429 aa15.77■□□□□ 0.11
SCARNA16.1-201ENST00000516133 TESK2Q96S53 571 aa15.76■□□□□ 0.11
SCARNA16.1-201ENST00000516133 USP6P35125 1406 aa15.76■□□□□ 0.11
SCARNA16.1-201ENST00000516133 PRDM11Q9NQV5 511 aa15.75■□□□□ 0.11
SCARNA16.1-201ENST00000516133 NLRP6P59044 892 aa15.74■□□□□ 0.11
SCARNA16.1-201ENST00000516133 VPS72Q15906 364 aa15.74■□□□□ 0.11
SCARNA16.1-201ENST00000516133 TMC1Q8TDI8 760 aa15.74■□□□□ 0.11
SCARNA16.1-201ENST00000516133 BTG4Q9NY30 223 aa15.73■□□□□ 0.11
SCARNA16.1-201ENST00000516133 USP47Q96K76 1375 aa15.73■□□□□ 0.11
SCARNA16.1-201ENST00000516133 CPSF1Q10570 1443 aaKnown RBP15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 SSH2Q76I76 1423 aa15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 GCP02774 474 aa15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 ZC3H6P61129 1189 aaKnown RBP15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 TMF1P82094 1093 aa15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 SLC12A5Q9H2X9 1139 aa15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 TERF2IPQ9NYB0 399 aa15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 KTN1Q86UP2 1357 aaKnown RBP15.72■□□□□ 0.11
SCARNA16.1-201ENST00000516133 USP19O94966 1318 aa15.71■□□□□ 0.11
SCARNA16.1-201ENST00000516133 TTC21BQ7Z4L5 1316 aa15.71■□□□□ 0.11
SCARNA16.1-201ENST00000516133 TTC21AQ8NDW8 1320 aa15.71■□□□□ 0.11
SCARNA16.1-201ENST00000516133 CCDC9Q9Y3X0 531 aaKnown RBP15.71■□□□□ 0.11
SCARNA16.1-201ENST00000516133 KIAA0232Q92628 1395 aa15.71■□□□□ 0.11
SCARNA16.1-201ENST00000516133 CDCA8Q53HL2 280 aa15.7■□□□□ 0.1
SCARNA16.1-201ENST00000516133 ABCA3Q99758 1704 aa15.7■□□□□ 0.1
SCARNA16.1-201ENST00000516133 RGS12O14924 1447 aa15.69■□□□□ 0.1
SCARNA16.1-201ENST00000516133 CHRNA2Q15822 529 aa15.69■□□□□ 0.1
SCARNA16.1-201ENST00000516133 NINLQ9Y2I6 1382 aa15.69■□□□□ 0.1
SCARNA16.1-201ENST00000516133 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
SCARNA16.1-201ENST00000516133 NWD2Q9ULI1 1742 aa15.68■□□□□ 0.1
SCARNA16.1-201ENST00000516133 CPDO75976 1380 aa15.68■□□□□ 0.1
SCARNA16.1-201ENST00000516133 ONECUT3O60422 494 aaPredicted RBP15.68■□□□□ 0.1
SCARNA16.1-201ENST00000516133 KCNH5Q8NCM2 988 aa15.68■□□□□ 0.1
SCARNA16.1-201ENST00000516133 COL14A1Q05707 1796 aaKnown RBP15.67■□□□□ 0.1
SCARNA16.1-201ENST00000516133 EVA1CP58658 441 aa15.67■□□□□ 0.1
SCARNA16.1-201ENST00000516133 CRYBG1Q9Y4K1 1723 aa15.66■□□□□ 0.1
SCARNA16.1-201ENST00000516133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCARNA16.1-201ENST00000516133 UPF1Q92900 1129 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCARNA16.1-201ENST00000516133 PLCH1Q4KWH8 1693 aa15.65■□□□□ 0.1
SCARNA16.1-201ENST00000516133 SEPT12Q8IYM1 358 aa15.64■□□□□ 0.09
SCARNA16.1-201ENST00000516133 STRN4Q9NRL3 753 aa15.64■□□□□ 0.09
SCARNA16.1-201ENST00000516133 CD163L1Q9NR16 1453 aa15.64■□□□□ 0.09
SCARNA16.1-201ENST00000516133 SPATA31A5Q5VU36 1347 aa15.64■□□□□ 0.09
SCARNA16.1-201ENST00000516133 SPATA31A7Q8IWB4 1347 aa15.64■□□□□ 0.09
SCARNA16.1-201ENST00000516133 AKAP12Q02952 1782 aa15.63■□□□□ 0.09
SCARNA16.1-201ENST00000516133 EIF4G2P78344 907 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCARNA16.1-201ENST00000516133 PHRF1Q9P1Y6 1649 aaKnown RBP15.63■□□□□ 0.09
SCARNA16.1-201ENST00000516133 A0A1W2PP64 1363 aa15.62■□□□□ 0.09
SCARNA16.1-201ENST00000516133 USP31Q70CQ4 1352 aa15.62■□□□□ 0.09
SCARNA16.1-201ENST00000516133 GLI3P10071 1580 aa15.62■□□□□ 0.09
SCARNA16.1-201ENST00000516133 EDC4Q6P2E9 1401 aaKnown RBP15.62■□□□□ 0.09
SCARNA16.1-201ENST00000516133 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
SCARNA16.1-201ENST00000516133 FAM98CQ17RN3 349 aaKnown RBP15.61■□□□□ 0.09
SCARNA16.1-201ENST00000516133 ARHGEF25Q86VW2 580 aa15.61■□□□□ 0.09
SCARNA16.1-201ENST00000516133 NME9Q86XW9 330 aa15.61■□□□□ 0.09
SCARNA16.1-201ENST00000516133 SPATA31A1Q5TZJ5 1347 aa15.61■□□□□ 0.09
SCARNA16.1-201ENST00000516133 NRKQ7Z2Y5 1582 aa15.61■□□□□ 0.09
SCARNA16.1-201ENST00000516133 PIK3C2AO00443 1686 aa15.6■□□□□ 0.09
SCARNA16.1-201ENST00000516133 SLIT3O75094 1523 aa15.6■□□□□ 0.09
SCARNA16.1-201ENST00000516133 A0A0G2JS52 829 aa15.6■□□□□ 0.09
SCARNA16.1-201ENST00000516133 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
SCARNA16.1-201ENST00000516133 MYT1Q01538 1121 aa15.6■□□□□ 0.09
SCARNA16.1-201ENST00000516133 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
SCARNA16.1-201ENST00000516133 SOX12O15370 315 aa15.59■□□□□ 0.09
SCARNA16.1-201ENST00000516133 KRT27Q7Z3Y8 459 aa15.59■□□□□ 0.09
SCARNA16.1-201ENST00000516133 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
SCARNA16.1-201ENST00000516133 CAMTA1Q9Y6Y1 1673 aa15.59■□□□□ 0.09
SCARNA16.1-201ENST00000516133 MON2Q7Z3U7 1717 aa15.59■□□□□ 0.09
SCARNA16.1-201ENST00000516133 NRAPQ86VF7 1730 aa15.59■□□□□ 0.09
SCARNA16.1-201ENST00000516133 ANKRD36BQ8N2N9 1353 aa15.59■□□□□ 0.09
SCARNA16.1-201ENST00000516133 LARP1Q6PKG0 1096 aaKnown RBP15.58■□□□□ 0.08
SCARNA16.1-201ENST00000516133 HSPA5P11021 654 aaKnown RBP15.57■□□□□ 0.08
SCARNA16.1-201ENST00000516133 BARGINQ6ZT62 677 aa15.57■□□□□ 0.08
SCARNA16.1-201ENST00000516133 TCP11L2Q8N4U5 519 aa15.57■□□□□ 0.08
SCARNA16.1-201ENST00000516133 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
SCARNA16.1-201ENST00000516133 THRAP3Q9Y2W1 955 aaKnown RBP15.57■□□□□ 0.08
SCARNA16.1-201ENST00000516133 EP400Q96L91 3159 aa15.56■□□□□ 0.08
SCARNA16.1-201ENST00000516133 COG3Q96JB2 828 aa15.56■□□□□ 0.08
SCARNA16.1-201ENST00000516133 AXIN2Q9Y2T1 843 aa15.56■□□□□ 0.08
SCARNA16.1-201ENST00000516133 LMO7Q8WWI1 1683 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms