RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 PLEKHN1Q494U1 663 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 OGFOD2Q6N063 350 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 XKR5Q6UX68 686 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DLK2Q6UY11 383 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MAMSTRQ6ZN01 415 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FBXL16Q8N461 479 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TYMSOSQ8TAI1 123 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF398Q8TD17 642 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 COL26A1Q96A83 441 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF503Q96F45 646 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SORCS2Q96PQ0 1159 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HS3ST6Q96QI5 342 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SRCIN1Q9C0H9 1055 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SLITRK6Q9H5Y7 841 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF408Q9H9D4 720 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SCUBE2Q9NQ36 999 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CRIM1Q9NZV1 1036 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF581Q9P0T4 197 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DCHS2Q6V1P9 2916 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LRP1BQ9NZR2 4599 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KAT6AQ92794 2004 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LAMA3Q16787 3333 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ITPR3Q14573 2671 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HSPG2P98160 4391 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 POLQO75417 2590 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 USP9XQ93008 2570 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 COL11A1P12107 1806 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SRCAPQ6ZRS2 3230 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CHD6Q8TD26 2715 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KDM4FA0A1W2PPD8 638 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ANKRD33BA6NCL7 494 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TERTO14746 1132 aaKnown RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ATMINO43313 823 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 RPS2P15880 293 aaKnown RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TAL1P17542 331 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZFP36P26651 326 aaKnown RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SCARF1Q14162 830 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 GRM7Q14831 915 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MST1LQ2TV78 715 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TSGA10IPQ3SY00 556 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF362Q5T0B9 420 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TTLL10Q6ZVT0 673 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 USP43Q70EL4 1123 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FAM214BQ7L5A3 538 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KRTAP19-3Q7Z4W3 81 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SPEM1Q8N4L4 309 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SHKBP1Q8TBC3 707 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TMEM255BQ8WV15 326 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CSRNP3Q8WYN3 585 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF414Q96IQ9 312 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MYRFLQ96LU7 910 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 Q96M66 194 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DCBLD2Q96PD2 775 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PLA2G12AQ9BZM1 189 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF275Q9NSD4 429 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZIM2Q9NZV7 527 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 RALYQ9UKM9 306 aaKnown RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NOVA2Q9UNW9 492 aaKnown RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 WBP11Q9Y2W2 641 aaKnown RBP-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HECTD4Q9Y4D8 3996 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ADAMTS9Q9P2N4 1935 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CACNA1HO95180 2353 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MGAM2Q2M2H8 2515 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ITPR2Q14571 2701 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ICE1Q9Y2F5 2266 aa-0.31□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LAMA1P25391 3075 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PTPRZ1P23471 2315 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MEGF11A6BM72 1044 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FAM205CA6NFA0 338 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 DBX1A6NMT0 343 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SOBPA7XYQ1 873 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MSH5O43196 834 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ADAM11O75078 769 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MED26O95402 600 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SLPIP03973 132 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KRTAP1-4P0C5Y4 121 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HNRNPA2B1P22626 353 aaKnown RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 THBS3P49746 956 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 EMP3P54852 163 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CTSWP56202 376 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MLLT1Q03111 559 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 EGFEM1PQ0D2K5 195 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TROAPQ12815 778 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 POU4F2Q12837 409 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ILF3Q12906 894 aaKnown RBP eCLIP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PUM1Q14671 1186 aaKnown RBP eCLIP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZNF124Q15973 351 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 INF2Q27J81 1249 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZXDCQ2QGD7 858 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SKOR2Q2VWA4 1001 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NAALADL2Q58DX5 795 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 EPHA10Q5JZY3 1008 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FBXO31Q5XUX0 539 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FBXL22Q6P050 247 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FAM98AQ8NCA5 519 aaKnown RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SLC16A11Q8NCK7 471 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZCCHC14Q8WYQ9 949 aaKnown RBP-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 VOPP1Q96AW1 172 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 BORCS6Q96GS4 357 aa-0.32□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KCNK17Q96T54 332 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms