RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 TTC21BQ7Z4L5 1316 aa10.21□□□□□ -0.78
SCARNA20.1-201ENST00000516009 BLMP54132 1417 aaPredicted RBP10.21□□□□□ -0.78
SCARNA20.1-201ENST00000516009 NCOA3Q9Y6Q9 1424 aa10.21□□□□□ -0.78
SCARNA20.1-201ENST00000516009 XIRP1Q702N8 1843 aaKnown RBP10.2□□□□□ -0.78
SCARNA20.1-201ENST00000516009 SSH2Q76I76 1423 aa10.2□□□□□ -0.78
SCARNA20.1-201ENST00000516009 NME9Q86XW9 330 aa10.2□□□□□ -0.78
SCARNA20.1-201ENST00000516009 COG3Q96JB2 828 aa10.2□□□□□ -0.78
SCARNA20.1-201ENST00000516009 SCAF1Q9H7N4 1312 aaKnown RBP10.2□□□□□ -0.78
SCARNA20.1-201ENST00000516009 PHF8Q9UPP1 1060 aa10.2□□□□□ -0.78
SCARNA20.1-201ENST00000516009 KIF1AQ12756 1690 aa10.19□□□□□ -0.78
SCARNA20.1-201ENST00000516009 TMEM94Q12767 1356 aa10.19□□□□□ -0.78
SCARNA20.1-201ENST00000516009 TTC21AQ8NDW8 1320 aa10.19□□□□□ -0.78
SCARNA20.1-201ENST00000516009 C19orf44Q9H6X5 657 aa10.19□□□□□ -0.78
SCARNA20.1-201ENST00000516009 ADAMTS8Q9UP79 889 aa10.19□□□□□ -0.78
SCARNA20.1-201ENST00000516009 PIK3C2AO00443 1686 aa10.18□□□□□ -0.78
SCARNA20.1-201ENST00000516009 DCCP43146 1447 aa10.18□□□□□ -0.78
SCARNA20.1-201ENST00000516009 USP54Q70EL1 1684 aa10.18□□□□□ -0.78
SCARNA20.1-201ENST00000516009 OVOS2A0A0J9YW53 1432 aa10.17□□□□□ -0.78
SCARNA20.1-201ENST00000516009 OVOS2Q6IE36 1432 aa10.17□□□□□ -0.78
SCARNA20.1-201ENST00000516009 AATKQ6ZMQ8 1374 aa10.17□□□□□ -0.78
SCARNA20.1-201ENST00000516009 ATF3P18847 181 aa10.17□□□□□ -0.78
SCARNA20.1-201ENST00000516009 ESCO1Q5FWF5 840 aa10.17□□□□□ -0.78
SCARNA20.1-201ENST00000516009 ZRANB1Q9UGI0 708 aa10.17□□□□□ -0.78
SCARNA20.1-201ENST00000516009 DMRT2Q9Y5R5 561 aa10.17□□□□□ -0.78
SCARNA20.1-201ENST00000516009 COL3A1P02461 1466 aaPredicted RBP10.17□□□□□ -0.78
SCARNA20.1-201ENST00000516009 MSH6P52701 1360 aa10.16□□□□□ -0.78
SCARNA20.1-201ENST00000516009 MARF1Q9Y4F3 1742 aaKnown RBP10.16□□□□□ -0.78
SCARNA20.1-201ENST00000516009 SMG6Q86US8 1419 aaKnown RBP10.16□□□□□ -0.78
SCARNA20.1-201ENST00000516009 USP31Q70CQ4 1352 aa10.15□□□□□ -0.78
SCARNA20.1-201ENST00000516009 LRRC7Q96NW7 1537 aa10.15□□□□□ -0.78
SCARNA20.1-201ENST00000516009 C1orf167Q5SNV9 1468 aa10.15□□□□□ -0.78
SCARNA20.1-201ENST00000516009 CDK12Q9NYV4 1490 aaPredicted RBP10.15□□□□□ -0.78
SCARNA20.1-201ENST00000516009 MST1RQ04912 1400 aa10.15□□□□□ -0.79
SCARNA20.1-201ENST00000516009 ZNF335Q9H4Z2 1342 aaPredicted RBP10.14□□□□□ -0.79
SCARNA20.1-201ENST00000516009 PSME1Q06323 249 aa10.14□□□□□ -0.79
SCARNA20.1-201ENST00000516009 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
SCARNA20.1-201ENST00000516009 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
SCARNA20.1-201ENST00000516009 NUDCQ9Y266 331 aa10.14□□□□□ -0.79
SCARNA20.1-201ENST00000516009 PNPLA6Q8IY17 1366 aa10.14□□□□□ -0.79
SCARNA20.1-201ENST00000516009 SENP3-EIF4A1A0A087X0R7 540 aa10.13□□□□□ -0.79
SCARNA20.1-201ENST00000516009 PPM1GO15355 546 aaPredicted RBP10.13□□□□□ -0.79
SCARNA20.1-201ENST00000516009 DIAPH1O60610 1272 aaKnown RBP10.13□□□□□ -0.79
SCARNA20.1-201ENST00000516009 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
SCARNA20.1-201ENST00000516009 CCDC146Q8IYE0 955 aa10.13□□□□□ -0.79
SCARNA20.1-201ENST00000516009 ORAI2Q96SN7 254 aa10.13□□□□□ -0.79
SCARNA20.1-201ENST00000516009 TRPM3Q9HCF6 1732 aaPredicted RBP10.13□□□□□ -0.79
SCARNA20.1-201ENST00000516009 FBLN1P23142 703 aa10.12□□□□□ -0.79
SCARNA20.1-201ENST00000516009 NLRP6P59044 892 aa10.12□□□□□ -0.79
SCARNA20.1-201ENST00000516009 ABTB2Q8N961 1025 aa10.12□□□□□ -0.79
SCARNA20.1-201ENST00000516009 SALL2Q9Y467 1007 aaPredicted RBP10.12□□□□□ -0.79
SCARNA20.1-201ENST00000516009 EMILIN1Q9Y6C2 1016 aa10.12□□□□□ -0.79
SCARNA20.1-201ENST00000516009 PEAK1Q9H792 1746 aa10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 FOXO3O43524 673 aa10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 U2AF1L5P0DN76 240 aaPredicted RBP10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 U2AF1Q01081 240 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 PDE3BQ13370 1112 aa10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 RRS1Q15050 365 aaKnown RBP10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 NGEFQ8N5V2 710 aa10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 LTN1O94822 1766 aa10.11□□□□□ -0.79
SCARNA20.1-201ENST00000516009 APAF1O14727 1248 aa10.1□□□□□ -0.79
SCARNA20.1-201ENST00000516009 RUNDC1Q96C34 613 aa10.1□□□□□ -0.79
SCARNA20.1-201ENST00000516009 ALS2Q96Q42 1657 aa10.09□□□□□ -0.79
SCARNA20.1-201ENST00000516009 SOX12O15370 315 aa10.09□□□□□ -0.79
SCARNA20.1-201ENST00000516009 NUTM2GQ5VZR2 741 aa10.09□□□□□ -0.79
SCARNA20.1-201ENST00000516009 KRT28Q7Z3Y7 464 aa10.09□□□□□ -0.79
SCARNA20.1-201ENST00000516009 PNNQ9H307 717 aaKnown RBP10.09□□□□□ -0.79
SCARNA20.1-201ENST00000516009 IQSEC2Q5JU85 1478 aa10.09□□□□□ -0.79
SCARNA20.1-201ENST00000516009 XPCQ01831 940 aaPredicted RBP10.08□□□□□ -0.8
SCARNA20.1-201ENST00000516009 SBNO1A3KN83 1393 aa10.08□□□□□ -0.8
SCARNA20.1-201ENST00000516009 KIF24Q5T7B8 1368 aa10.08□□□□□ -0.8
SCARNA20.1-201ENST00000516009 NPHP3Q7Z494 1330 aa10.07□□□□□ -0.8
SCARNA20.1-201ENST00000516009 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
SCARNA20.1-201ENST00000516009 FLT4P35916 1363 aa10.07□□□□□ -0.8
SCARNA20.1-201ENST00000516009 IL13P35225 146 aa10.07□□□□□ -0.8
SCARNA20.1-201ENST00000516009 SLIT3O75094 1523 aa10.07□□□□□ -0.8
SCARNA20.1-201ENST00000516009 NFAT5O94916 1531 aa10.07□□□□□ -0.8
SCARNA20.1-201ENST00000516009 MAP3K19Q56UN5 1328 aa10.07□□□□□ -0.8
SCARNA20.1-201ENST00000516009 FCHSD2O94868 740 aa10.06□□□□□ -0.8
SCARNA20.1-201ENST00000516009 NEFMP07197 916 aa10.06□□□□□ -0.8
SCARNA20.1-201ENST00000516009 AMPHP49418 695 aa10.06□□□□□ -0.8
SCARNA20.1-201ENST00000516009 LMOD2Q6P5Q4 547 aa10.06□□□□□ -0.8
SCARNA20.1-201ENST00000516009 TCP11L2Q8N4U5 519 aa10.06□□□□□ -0.8
SCARNA20.1-201ENST00000516009 KCNH5Q8NCM2 988 aa10.06□□□□□ -0.8
SCARNA20.1-201ENST00000516009 RGPD1P0DJD0 1748 aa10.06□□□□□ -0.8
SCARNA20.1-201ENST00000516009 PHRF1Q9P1Y6 1649 aaKnown RBP10.06□□□□□ -0.8
SCARNA20.1-201ENST00000516009 NEFLP07196 543 aa10.05□□□□□ -0.8
SCARNA20.1-201ENST00000516009 EIF4A2Q14240 407 aaKnown RBP10.05□□□□□ -0.8
SCARNA20.1-201ENST00000516009 NCBP3Q53F19 620 aaKnown RBP10.05□□□□□ -0.8
SCARNA20.1-201ENST00000516009 SLAIN2Q9P270 581 aa10.05□□□□□ -0.8
SCARNA20.1-201ENST00000516009 ZNF521Q96K83 1311 aa10.05□□□□□ -0.8
SCARNA20.1-201ENST00000516009 PXDNQ92626 1479 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 NHSL1Q5SYE7 1610 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 LTBP4Q8N2S1 1624 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 RTL1A6NKG5 1358 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 GOLGA2Q08379 1002 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 HSP90AB2PQ58FF8 381 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 BRINP3Q76B58 766 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 CDCA7LQ96GN5 454 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms