RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 AP1G2O75843 785 aa7.09□□□□□ -1.27
RNU4-29P-201ENST00000515943 SH3BP2P78314 561 aa7.09□□□□□ -1.27
RNU4-29P-201ENST00000515943 LINC01559Q495D7 138 aa7.09□□□□□ -1.27
RNU4-29P-201ENST00000515943 Q6ZNB5 142 aa7.09□□□□□ -1.27
RNU4-29P-201ENST00000515943 LRRN4Q8WUT4 740 aa7.09□□□□□ -1.27
RNU4-29P-201ENST00000515943 USP17L8P0C7I0 530 aa7.08□□□□□ -1.28
RNU4-29P-201ENST00000515943 RC3H1Q5TC82 1133 aaKnown RBP7.08□□□□□ -1.28
RNU4-29P-201ENST00000515943 ZNF511Q8NB15 262 aa7.08□□□□□ -1.28
RNU4-29P-201ENST00000515943 BAP1Q92560 729 aa7.08□□□□□ -1.28
RNU4-29P-201ENST00000515943 MRGPRX2Q96LB1 330 aa7.08□□□□□ -1.28
RNU4-29P-201ENST00000515943 TOR4AQ9NXH8 423 aa7.08□□□□□ -1.28
RNU4-29P-201ENST00000515943 TMEM259Q4ZIN3 620 aa7.06□□□□□ -1.28
RNU4-29P-201ENST00000515943 CYP4X1Q8N118 509 aa7.06□□□□□ -1.28
RNU4-29P-201ENST00000515943 LCE2BO14633 110 aa7.05□□□□□ -1.28
RNU4-29P-201ENST00000515943 EHBP1Q8NDI1 1231 aa7.05□□□□□ -1.28
RNU4-29P-201ENST00000515943 ARMC2Q8NEN0 867 aa7.05□□□□□ -1.28
RNU4-29P-201ENST00000515943 HMX1Q9NP08 348 aaPredicted RBP7.05□□□□□ -1.28
RNU4-29P-201ENST00000515943 FAM187AA6NFU0 413 aa7.04□□□□□ -1.28
RNU4-29P-201ENST00000515943 SIAH2O43255 324 aa7.04□□□□□ -1.28
RNU4-29P-201ENST00000515943 DGAT1O75907 488 aa7.04□□□□□ -1.28
RNU4-29P-201ENST00000515943 NBPF14Q5TI25 921 aa7.04□□□□□ -1.28
RNU4-29P-201ENST00000515943 SNIP1Q8TAD8 396 aaKnown RBP7.04□□□□□ -1.28
RNU4-29P-201ENST00000515943 NR6A1Q15406 480 aa7.03□□□□□ -1.28
RNU4-29P-201ENST00000515943 PKDCCQ504Y2 493 aa7.03□□□□□ -1.28
RNU4-29P-201ENST00000515943 GPKOWQ92917 476 aaPredicted RBP eCLIP7.03□□□□□ -1.28
RNU4-29P-201ENST00000515943 FOXJ1Q92949 421 aa7.03□□□□□ -1.28
RNU4-29P-201ENST00000515943 TTC24A2A3L6 582 aaPredicted RBP7.02□□□□□ -1.29
RNU4-29P-201ENST00000515943 SMPD1P17405 629 aa7.02□□□□□ -1.29
RNU4-29P-201ENST00000515943 VARSP26640 1264 aaKnown RBP7.02□□□□□ -1.29
RNU4-29P-201ENST00000515943 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
RNU4-29P-201ENST00000515943 SH3BP5LQ7L8J4 393 aa7.02□□□□□ -1.29
RNU4-29P-201ENST00000515943 BANK1Q8NDB2 785 aa7.02□□□□□ -1.29
RNU4-29P-201ENST00000515943 EPS8L1Q8TE68 723 aa7.02□□□□□ -1.29
RNU4-29P-201ENST00000515943 FKBPLQ9UIM3 349 aa7.02□□□□□ -1.29
RNU4-29P-201ENST00000515943 ZC3H4Q9UPT8 1303 aaKnown RBP7.01□□□□□ -1.29
RNU4-29P-201ENST00000515943 J3QL48 77 aa7.01□□□□□ -1.29
RNU4-29P-201ENST00000515943 SH3RF1Q7Z6J0 888 aa7.01□□□□□ -1.29
RNU4-29P-201ENST00000515943 BPHLQ86WA6 291 aaPredicted RBP7.01□□□□□ -1.29
RNU4-29P-201ENST00000515943 TRIM34Q9BYJ4 488 aa7.01□□□□□ -1.29
RNU4-29P-201ENST00000515943 TLL2Q9Y6L7 1015 aa7.01□□□□□ -1.29
RNU4-29P-201ENST00000515943 SOCS7O14512 581 aa7□□□□□ -1.29
RNU4-29P-201ENST00000515943 TRAF7Q6Q0C0 670 aa7□□□□□ -1.29
RNU4-29P-201ENST00000515943 GJD4Q96KN9 370 aaPredicted RBP7□□□□□ -1.29
RNU4-29P-201ENST00000515943 C1QTNF2Q9BXJ5 285 aa7□□□□□ -1.29
RNU4-29P-201ENST00000515943 AVPP01185 164 aa6.99□□□□□ -1.29
RNU4-29P-201ENST00000515943 MYT1Q01538 1121 aa6.99□□□□□ -1.29
RNU4-29P-201ENST00000515943 AGERQ15109 404 aa6.99□□□□□ -1.29
RNU4-29P-201ENST00000515943 PDXDC2PQ6P474 469 aa6.99□□□□□ -1.29
RNU4-29P-201ENST00000515943 MPNDQ8N594 471 aa6.99□□□□□ -1.29
RNU4-29P-201ENST00000515943 MTMR14Q8NCE2 650 aa6.99□□□□□ -1.29
RNU4-29P-201ENST00000515943 FAM174AQ8TBP5 190 aa6.99□□□□□ -1.29
RNU4-29P-201ENST00000515943 ALDH1A1P00352 501 aa6.98□□□□□ -1.29
RNU4-29P-201ENST00000515943 TRMT44Q8IYL2 757 aaKnown RBP6.97□□□□□ -1.29
RNU4-29P-201ENST00000515943 CRIPAKQ8N1N5 446 aa6.97□□□□□ -1.29
RNU4-29P-201ENST00000515943 PNMA1Q8ND90 353 aa6.97□□□□□ -1.29
RNU4-29P-201ENST00000515943 SNRKQ9NRH2 765 aa6.97□□□□□ -1.29
RNU4-29P-201ENST00000515943 MAGEB6P1A0A0J9YX57 407 aa6.96□□□□□ -1.3
RNU4-29P-201ENST00000515943 HPS1Q92902 700 aa6.96□□□□□ -1.3
RNU4-29P-201ENST00000515943 CDK15Q96Q40 435 aa6.96□□□□□ -1.3
RNU4-29P-201ENST00000515943 OCSTAMPQ9BR26 566 aa6.96□□□□□ -1.3
RNU4-29P-201ENST00000515943 ARHGAP9Q9BRR9 750 aa6.96□□□□□ -1.3
RNU4-29P-201ENST00000515943 GPSM3Q9Y4H4 160 aa6.96□□□□□ -1.3
RNU4-29P-201ENST00000515943 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 GPR37L1O60883 481 aa6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 CTC1Q2NKJ3 1217 aa6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 ERFEQ4G0M1 354 aa6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 CARD14Q9BXL6 1004 aa6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 AAASQ9NRG9 546 aa6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 MAP4K5Q9Y4K4 846 aa6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 WASF2Q9Y6W5 498 aa6.95□□□□□ -1.3
RNU4-29P-201ENST00000515943 ADH1CP00326 375 aa6.94□□□□□ -1.3
RNU4-29P-201ENST00000515943 PTK2Q05397 1052 aa6.94□□□□□ -1.3
RNU4-29P-201ENST00000515943 TMEM132AQ24JP5 1023 aa6.94□□□□□ -1.3
RNU4-29P-201ENST00000515943 APBB1O00213 710 aa6.93□□□□□ -1.3
RNU4-29P-201ENST00000515943 AXIN1O15169 862 aa6.92□□□□□ -1.3
RNU4-29P-201ENST00000515943 GRM5P41594 1212 aa6.92□□□□□ -1.3
RNU4-29P-201ENST00000515943 NNTQ13423 1086 aa6.92□□□□□ -1.3
RNU4-29P-201ENST00000515943 ARID5BQ14865 1188 aa6.92□□□□□ -1.3
RNU4-29P-201ENST00000515943 ADAM32Q8TC27 787 aa6.92□□□□□ -1.3
RNU4-29P-201ENST00000515943 SLC10A4Q96EP9 437 aa6.92□□□□□ -1.3
RNU4-29P-201ENST00000515943 NDUFB9Q9Y6M9 179 aa6.92□□□□□ -1.3
RNU4-29P-201ENST00000515943 NR5A1Q13285 461 aa6.91□□□□□ -1.3
RNU4-29P-201ENST00000515943 MCM6Q14566 821 aa6.91□□□□□ -1.3
RNU4-29P-201ENST00000515943 ZBTB33Q86T24 672 aa6.91□□□□□ -1.3
RNU4-29P-201ENST00000515943 NISCHQ9Y2I1 1504 aa6.91□□□□□ -1.3
RNU4-29P-201ENST00000515943 NR3C2P08235 984 aa6.9□□□□□ -1.3
RNU4-29P-201ENST00000515943 FSHRP23945 695 aa6.9□□□□□ -1.3
RNU4-29P-201ENST00000515943 VASH1Q7L8A9 365 aaPredicted RBP6.9□□□□□ -1.3
RNU4-29P-201ENST00000515943 ZBBXA8MT70 800 aa6.89□□□□□ -1.31
RNU4-29P-201ENST00000515943 FBXO45P0C2W1 286 aa6.89□□□□□ -1.31
RNU4-29P-201ENST00000515943 KLF16Q9BXK1 252 aaPredicted RBP6.89□□□□□ -1.31
RNU4-29P-201ENST00000515943 DACH1Q9UI36 760 aa6.89□□□□□ -1.31
RNU4-29P-201ENST00000515943 CDV3Q9UKY7 258 aaKnown RBP6.89□□□□□ -1.31
RNU4-29P-201ENST00000515943 TBC1D2BQ9UPU7 963 aa6.89□□□□□ -1.31
RNU4-29P-201ENST00000515943 TIMP2P16035 220 aa6.88□□□□□ -1.31
RNU4-29P-201ENST00000515943 CAPN5O15484 640 aaPredicted RBP6.87□□□□□ -1.31
RNU4-29P-201ENST00000515943 WDR4P57081 412 aaKnown RBP6.87□□□□□ -1.31
RNU4-29P-201ENST00000515943 NR1H3Q13133 447 aa6.87□□□□□ -1.31
RNU4-29P-201ENST00000515943 KCTD15Q96SI1 283 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms