RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 ACEP12821 1306 aa28.03■■■□□ 2.08
DDR1-280ENST00000515881 RALGAPBQ86X10 1494 aa28.02■■■□□ 2.08
DDR1-280ENST00000515881 QRICH2Q9H0J4 1663 aa28.01■■■□□ 2.07
DDR1-280ENST00000515881 FAM83GA6ND36 823 aa28.01■■■□□ 2.07
DDR1-280ENST00000515881 NBPF8Q3BBV2 869 aa28.01■■■□□ 2.07
DDR1-280ENST00000515881 CABP2Q9NPB3 220 aa28■■■□□ 2.07
DDR1-280ENST00000515881 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
DDR1-280ENST00000515881 VPS72Q15906 364 aa27.99■■■□□ 2.07
DDR1-280ENST00000515881 PLCH1Q4KWH8 1693 aa27.99■■■□□ 2.07
DDR1-280ENST00000515881 PPIP5K1Q6PFW1 1433 aa27.99■■■□□ 2.07
DDR1-280ENST00000515881 GLI3P10071 1580 aa27.99■■■□□ 2.07
DDR1-280ENST00000515881 NWD2Q9ULI1 1742 aa27.97■■■□□ 2.07
DDR1-280ENST00000515881 TONSLQ96HA7 1378 aa27.96■■■□□ 2.07
DDR1-280ENST00000515881 CRYBG1Q9Y4K1 1723 aa27.95■■■□□ 2.06
DDR1-280ENST00000515881 EVC2Q86UK5 1308 aa27.93■■■□□ 2.06
DDR1-280ENST00000515881 BTG4Q9NY30 223 aa27.93■■■□□ 2.06
DDR1-280ENST00000515881 NUTM2GQ5VZR2 741 aa27.92■■■□□ 2.06
DDR1-280ENST00000515881 CCDC9Q9Y3X0 531 aaKnown RBP27.92■■■□□ 2.06
DDR1-280ENST00000515881 COL14A1Q05707 1796 aaKnown RBP27.91■■■□□ 2.06
DDR1-280ENST00000515881 PRDM11Q9NQV5 511 aa27.91■■■□□ 2.06
DDR1-280ENST00000515881 CABP1Q9NZU7 370 aa27.9■■■□□ 2.06
DDR1-280ENST00000515881 ABTB2Q8N961 1025 aa27.89■■■□□ 2.06
DDR1-280ENST00000515881 NRAPQ86VF7 1730 aa27.88■■■□□ 2.05
DDR1-280ENST00000515881 BRD4O60885 1362 aaPredicted RBP27.87■■■□□ 2.05
DDR1-280ENST00000515881 KIAA0232Q92628 1395 aa27.87■■■□□ 2.05
DDR1-280ENST00000515881 CARD11Q9BXL7 1154 aa27.87■■■□□ 2.05
DDR1-280ENST00000515881 PHRF1Q9P1Y6 1649 aaKnown RBP27.87■■■□□ 2.05
DDR1-280ENST00000515881 ONECUT3O60422 494 aaPredicted RBP27.86■■■□□ 2.05
DDR1-280ENST00000515881 SEPT12Q8IYM1 358 aa27.86■■■□□ 2.05
DDR1-280ENST00000515881 USP6P35125 1406 aa27.84■■■□□ 2.05
DDR1-280ENST00000515881 USP19O94966 1318 aa27.84■■■□□ 2.05
DDR1-280ENST00000515881 ZC3H6P61129 1189 aaKnown RBP27.83■■■□□ 2.05
DDR1-280ENST00000515881 SBNO2Q9Y2G9 1366 aa27.83■■■□□ 2.05
DDR1-280ENST00000515881 CHRNA2Q15822 529 aa27.82■■■□□ 2.04
DDR1-280ENST00000515881 NLRP13Q86W25 1043 aa27.82■■■□□ 2.04
DDR1-280ENST00000515881 NRKQ7Z2Y5 1582 aa27.81■■■□□ 2.04
DDR1-280ENST00000515881 SPATA31A5Q5VU36 1347 aa27.8■■■□□ 2.04
DDR1-280ENST00000515881 SPATA31A7Q8IWB4 1347 aa27.8■■■□□ 2.04
DDR1-280ENST00000515881 FAM98CQ17RN3 349 aaKnown RBP27.79■■■□□ 2.04
DDR1-280ENST00000515881 SSH2Q76I76 1423 aa27.78■■■□□ 2.04
DDR1-280ENST00000515881 CPDO75976 1380 aa27.78■■■□□ 2.04
DDR1-280ENST00000515881 CCDC125Q86Z20 511 aa27.78■■■□□ 2.04
DDR1-280ENST00000515881 A0A0G2JS52 829 aa27.77■■■□□ 2.04
DDR1-280ENST00000515881 MYT1Q01538 1121 aa27.77■■■□□ 2.04
DDR1-280ENST00000515881 GCP02774 474 aa27.76■■■□□ 2.03
DDR1-280ENST00000515881 KRT27Q7Z3Y8 459 aa27.76■■■□□ 2.03
DDR1-280ENST00000515881 ZNF692Q9BU19 519 aaPredicted RBP27.75■■■□□ 2.03
DDR1-280ENST00000515881 NLRP6P59044 892 aa27.74■■■□□ 2.03
DDR1-280ENST00000515881 STRN4Q9NRL3 753 aa27.74■■■□□ 2.03
DDR1-280ENST00000515881 BRWD3Q6RI45 1802 aa27.74■■■□□ 2.03
DDR1-280ENST00000515881 BLMP54132 1417 aaPredicted RBP27.72■■■□□ 2.03
DDR1-280ENST00000515881 CPSF1Q10570 1443 aaKnown RBP27.72■■■□□ 2.03
DDR1-280ENST00000515881 SPATA31A1Q5TZJ5 1347 aa27.71■■■□□ 2.03
DDR1-280ENST00000515881 TTC21BQ7Z4L5 1316 aa27.7■■■□□ 2.03
DDR1-280ENST00000515881 CAMTA1Q9Y6Y1 1673 aa27.7■■■□□ 2.02
DDR1-280ENST00000515881 SLIT3O75094 1523 aa27.7■■■□□ 2.02
DDR1-280ENST00000515881 EVA1CP58658 441 aa27.69■■■□□ 2.02
DDR1-280ENST00000515881 PIK3C2AO00443 1686 aa27.68■■■□□ 2.02
DDR1-280ENST00000515881 LMO7Q8WWI1 1683 aa27.68■■■□□ 2.02
DDR1-280ENST00000515881 KTN1Q86UP2 1357 aaKnown RBP27.68■■■□□ 2.02
DDR1-280ENST00000515881 TTC21AQ8NDW8 1320 aa27.67■■■□□ 2.02
DDR1-280ENST00000515881 THSD7AQ9UPZ6 1657 aa27.67■■■□□ 2.02
DDR1-280ENST00000515881 EP400Q96L91 3159 aa27.66■■■□□ 2.02
DDR1-280ENST00000515881 AKAP12Q02952 1782 aa27.65■■■□□ 2.02
DDR1-280ENST00000515881 LARP1Q6PKG0 1096 aaKnown RBP27.65■■■□□ 2.02
DDR1-280ENST00000515881 ZBTB7CA1YPR0 619 aa27.63■■■□□ 2.01
DDR1-280ENST00000515881 USP35Q9P2H5 1018 aa27.63■■■□□ 2.01
DDR1-280ENST00000515881 COL5A2P05997 1499 aaPredicted RBP27.63■■■□□ 2.01
DDR1-280ENST00000515881 AATKQ6ZMQ8 1374 aa27.62■■■□□ 2.01
DDR1-280ENST00000515881 ST20-MTHFSA0A0A6YYL1 179 aa27.62■■■□□ 2.01
DDR1-280ENST00000515881 SF3B2Q13435 895 aaKnown RBP27.62■■■□□ 2.01
DDR1-280ENST00000515881 TMC1Q8TDI8 760 aa27.62■■■□□ 2.01
DDR1-280ENST00000515881 PUS7Q96PZ0 661 aaKnown RBP27.62■■■□□ 2.01
DDR1-280ENST00000515881 TESK2Q96S53 571 aa27.62■■■□□ 2.01
DDR1-280ENST00000515881 CD163L1Q9NR16 1453 aa27.62■■■□□ 2.01
DDR1-280ENST00000515881 BARGINQ6ZT62 677 aa27.61■■■□□ 2.01
DDR1-280ENST00000515881 KCNH5Q8NCM2 988 aa27.6■■■□□ 2.01
DDR1-280ENST00000515881 SLC12A5Q9H2X9 1139 aa27.59■■■□□ 2.01
DDR1-280ENST00000515881 MON2Q7Z3U7 1717 aa27.58■■■□□ 2.01
DDR1-280ENST00000515881 FAM182BQ5T319 152 aa27.58■■■□□ 2.01
DDR1-280ENST00000515881 HDGFL2Q7Z4V5 671 aaPredicted RBP27.58■■■□□ 2.01
DDR1-280ENST00000515881 DEFB132Q7Z7B7 95 aa27.58■■■□□ 2.01
DDR1-280ENST00000515881 TCP11L2Q8N4U5 519 aa27.58■■■□□ 2.01
DDR1-280ENST00000515881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.57■■■□□ 2
DDR1-280ENST00000515881 PCGF6Q9BYE7 350 aa27.57■■■□□ 2
DDR1-280ENST00000515881 CLSPNQ9HAW4 1339 aa27.57■■■□□ 2
DDR1-280ENST00000515881 SLC24A1O60721 1099 aa27.56■■■□□ 2
DDR1-280ENST00000515881 ARHGEF25Q86VW2 580 aa27.56■■■□□ 2
DDR1-280ENST00000515881 ZRANB1Q9UGI0 708 aa27.56■■■□□ 2
DDR1-280ENST00000515881 SOX12O15370 315 aa27.55■■■□□ 2
DDR1-280ENST00000515881 TERF2IPQ9NYB0 399 aa27.55■■■□□ 2
DDR1-280ENST00000515881 THRAP3Q9Y2W1 955 aaKnown RBP27.55■■■□□ 2
DDR1-280ENST00000515881 CRB1P82279 1406 aa27.55■■■□□ 2
DDR1-280ENST00000515881 USP31Q70CQ4 1352 aa27.54■■■□□ 2
DDR1-280ENST00000515881 TIMELESSQ9UNS1 1208 aa27.54■■■□□ 2
DDR1-280ENST00000515881 EDC4Q6P2E9 1401 aaKnown RBP27.53■■■□□ 2
DDR1-280ENST00000515881 A0A1W2PP64 1363 aa27.53■■■□□ 2
DDR1-280ENST00000515881 USP47Q96K76 1375 aa27.53■■■□□ 2
DDR1-280ENST00000515881 AXIN2Q9Y2T1 843 aa27.53■■■□□ 2
DDR1-280ENST00000515881 NFAT5O94916 1531 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms