RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-280	ENST00000515881	ACE	P12821	1306 aa		28.03	■■■□□ 2.08
DDR1-280	ENST00000515881	RALGAPB	Q86X10	1494 aa		28.02	■■■□□ 2.08
DDR1-280	ENST00000515881	QRICH2	Q9H0J4	1663 aa		28.01	■■■□□ 2.07
DDR1-280	ENST00000515881	FAM83G	A6ND36	823 aa		28.01	■■■□□ 2.07
DDR1-280	ENST00000515881	NBPF8	Q3BBV2	869 aa		28.01	■■■□□ 2.07
DDR1-280	ENST00000515881	CABP2	Q9NPB3	220 aa		28	■■■□□ 2.07
DDR1-280	ENST00000515881	ATAD2	Q6PL18	1390 aa		27.99	■■■□□ 2.07
DDR1-280	ENST00000515881	VPS72	Q15906	364 aa		27.99	■■■□□ 2.07
DDR1-280	ENST00000515881	PLCH1	Q4KWH8	1693 aa		27.99	■■■□□ 2.07
DDR1-280	ENST00000515881	PPIP5K1	Q6PFW1	1433 aa		27.99	■■■□□ 2.07
DDR1-280	ENST00000515881	GLI3	P10071	1580 aa		27.99	■■■□□ 2.07
DDR1-280	ENST00000515881	NWD2	Q9ULI1	1742 aa		27.97	■■■□□ 2.07
DDR1-280	ENST00000515881	TONSL	Q96HA7	1378 aa		27.96	■■■□□ 2.07
DDR1-280	ENST00000515881	CRYBG1	Q9Y4K1	1723 aa		27.95	■■■□□ 2.06
DDR1-280	ENST00000515881	EVC2	Q86UK5	1308 aa		27.93	■■■□□ 2.06
DDR1-280	ENST00000515881	BTG4	Q9NY30	223 aa		27.93	■■■□□ 2.06
DDR1-280	ENST00000515881	NUTM2G	Q5VZR2	741 aa		27.92	■■■□□ 2.06
DDR1-280	ENST00000515881	CCDC9	Q9Y3X0	531 aa	Known RBP	27.92	■■■□□ 2.06
DDR1-280	ENST00000515881	COL14A1	Q05707	1796 aa	Known RBP	27.91	■■■□□ 2.06
DDR1-280	ENST00000515881	PRDM11	Q9NQV5	511 aa		27.91	■■■□□ 2.06
DDR1-280	ENST00000515881	CABP1	Q9NZU7	370 aa		27.9	■■■□□ 2.06
DDR1-280	ENST00000515881	ABTB2	Q8N961	1025 aa		27.89	■■■□□ 2.06
DDR1-280	ENST00000515881	NRAP	Q86VF7	1730 aa		27.88	■■■□□ 2.05
DDR1-280	ENST00000515881	BRD4	O60885	1362 aa	Predicted RBP	27.87	■■■□□ 2.05
DDR1-280	ENST00000515881	KIAA0232	Q92628	1395 aa		27.87	■■■□□ 2.05
DDR1-280	ENST00000515881	CARD11	Q9BXL7	1154 aa		27.87	■■■□□ 2.05
DDR1-280	ENST00000515881	PHRF1	Q9P1Y6	1649 aa	Known RBP	27.87	■■■□□ 2.05
DDR1-280	ENST00000515881	ONECUT3	O60422	494 aa	Predicted RBP	27.86	■■■□□ 2.05
DDR1-280	ENST00000515881	SEPT12	Q8IYM1	358 aa		27.86	■■■□□ 2.05
DDR1-280	ENST00000515881	USP6	P35125	1406 aa		27.84	■■■□□ 2.05
DDR1-280	ENST00000515881	USP19	O94966	1318 aa		27.84	■■■□□ 2.05
DDR1-280	ENST00000515881	ZC3H6	P61129	1189 aa	Known RBP	27.83	■■■□□ 2.05
DDR1-280	ENST00000515881	SBNO2	Q9Y2G9	1366 aa		27.83	■■■□□ 2.05
DDR1-280	ENST00000515881	CHRNA2	Q15822	529 aa		27.82	■■■□□ 2.04
DDR1-280	ENST00000515881	NLRP13	Q86W25	1043 aa		27.82	■■■□□ 2.04
DDR1-280	ENST00000515881	NRK	Q7Z2Y5	1582 aa		27.81	■■■□□ 2.04
DDR1-280	ENST00000515881	SPATA31A5	Q5VU36	1347 aa		27.8	■■■□□ 2.04
DDR1-280	ENST00000515881	SPATA31A7	Q8IWB4	1347 aa		27.8	■■■□□ 2.04
DDR1-280	ENST00000515881	FAM98C	Q17RN3	349 aa	Known RBP	27.79	■■■□□ 2.04
DDR1-280	ENST00000515881	SSH2	Q76I76	1423 aa		27.78	■■■□□ 2.04
DDR1-280	ENST00000515881	CPD	O75976	1380 aa		27.78	■■■□□ 2.04
DDR1-280	ENST00000515881	CCDC125	Q86Z20	511 aa		27.78	■■■□□ 2.04
DDR1-280	ENST00000515881		A0A0G2JS52	829 aa		27.77	■■■□□ 2.04
DDR1-280	ENST00000515881	MYT1	Q01538	1121 aa		27.77	■■■□□ 2.04
DDR1-280	ENST00000515881	GC	P02774	474 aa		27.76	■■■□□ 2.03
DDR1-280	ENST00000515881	KRT27	Q7Z3Y8	459 aa		27.76	■■■□□ 2.03
DDR1-280	ENST00000515881	ZNF692	Q9BU19	519 aa	Predicted RBP	27.75	■■■□□ 2.03
DDR1-280	ENST00000515881	NLRP6	P59044	892 aa		27.74	■■■□□ 2.03
DDR1-280	ENST00000515881	STRN4	Q9NRL3	753 aa		27.74	■■■□□ 2.03
DDR1-280	ENST00000515881	BRWD3	Q6RI45	1802 aa		27.74	■■■□□ 2.03
DDR1-280	ENST00000515881	BLM	P54132	1417 aa	Predicted RBP	27.72	■■■□□ 2.03
DDR1-280	ENST00000515881	CPSF1	Q10570	1443 aa	Known RBP	27.72	■■■□□ 2.03
DDR1-280	ENST00000515881	SPATA31A1	Q5TZJ5	1347 aa		27.71	■■■□□ 2.03
DDR1-280	ENST00000515881	TTC21B	Q7Z4L5	1316 aa		27.7	■■■□□ 2.03
DDR1-280	ENST00000515881	CAMTA1	Q9Y6Y1	1673 aa		27.7	■■■□□ 2.02
DDR1-280	ENST00000515881	SLIT3	O75094	1523 aa		27.7	■■■□□ 2.02
DDR1-280	ENST00000515881	EVA1C	P58658	441 aa		27.69	■■■□□ 2.02
DDR1-280	ENST00000515881	PIK3C2A	O00443	1686 aa		27.68	■■■□□ 2.02
DDR1-280	ENST00000515881	LMO7	Q8WWI1	1683 aa		27.68	■■■□□ 2.02
DDR1-280	ENST00000515881	KTN1	Q86UP2	1357 aa	Known RBP	27.68	■■■□□ 2.02
DDR1-280	ENST00000515881	TTC21A	Q8NDW8	1320 aa		27.67	■■■□□ 2.02
DDR1-280	ENST00000515881	THSD7A	Q9UPZ6	1657 aa		27.67	■■■□□ 2.02
DDR1-280	ENST00000515881	EP400	Q96L91	3159 aa		27.66	■■■□□ 2.02
DDR1-280	ENST00000515881	AKAP12	Q02952	1782 aa		27.65	■■■□□ 2.02
DDR1-280	ENST00000515881	LARP1	Q6PKG0	1096 aa	Known RBP	27.65	■■■□□ 2.02
DDR1-280	ENST00000515881	ZBTB7C	A1YPR0	619 aa		27.63	■■■□□ 2.01
DDR1-280	ENST00000515881	USP35	Q9P2H5	1018 aa		27.63	■■■□□ 2.01
DDR1-280	ENST00000515881	COL5A2	P05997	1499 aa	Predicted RBP	27.63	■■■□□ 2.01
DDR1-280	ENST00000515881	AATK	Q6ZMQ8	1374 aa		27.62	■■■□□ 2.01
DDR1-280	ENST00000515881	ST20-MTHFS	A0A0A6YYL1	179 aa		27.62	■■■□□ 2.01
DDR1-280	ENST00000515881	SF3B2	Q13435	895 aa	Known RBP	27.62	■■■□□ 2.01
DDR1-280	ENST00000515881	TMC1	Q8TDI8	760 aa		27.62	■■■□□ 2.01
DDR1-280	ENST00000515881	PUS7	Q96PZ0	661 aa	Known RBP	27.62	■■■□□ 2.01
DDR1-280	ENST00000515881	TESK2	Q96S53	571 aa		27.62	■■■□□ 2.01
DDR1-280	ENST00000515881	CD163L1	Q9NR16	1453 aa		27.62	■■■□□ 2.01
DDR1-280	ENST00000515881	BARGIN	Q6ZT62	677 aa		27.61	■■■□□ 2.01
DDR1-280	ENST00000515881	KCNH5	Q8NCM2	988 aa		27.6	■■■□□ 2.01
DDR1-280	ENST00000515881	SLC12A5	Q9H2X9	1139 aa		27.59	■■■□□ 2.01
DDR1-280	ENST00000515881	MON2	Q7Z3U7	1717 aa		27.58	■■■□□ 2.01
DDR1-280	ENST00000515881	FAM182B	Q5T319	152 aa		27.58	■■■□□ 2.01
DDR1-280	ENST00000515881	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.58	■■■□□ 2.01
DDR1-280	ENST00000515881	DEFB132	Q7Z7B7	95 aa		27.58	■■■□□ 2.01
DDR1-280	ENST00000515881	TCP11L2	Q8N4U5	519 aa		27.58	■■■□□ 2.01
DDR1-280	ENST00000515881	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.57	■■■□□ 2
DDR1-280	ENST00000515881	PCGF6	Q9BYE7	350 aa		27.57	■■■□□ 2
DDR1-280	ENST00000515881	CLSPN	Q9HAW4	1339 aa		27.57	■■■□□ 2
DDR1-280	ENST00000515881	SLC24A1	O60721	1099 aa		27.56	■■■□□ 2
DDR1-280	ENST00000515881	ARHGEF25	Q86VW2	580 aa		27.56	■■■□□ 2
DDR1-280	ENST00000515881	ZRANB1	Q9UGI0	708 aa		27.56	■■■□□ 2
DDR1-280	ENST00000515881	SOX12	O15370	315 aa		27.55	■■■□□ 2
DDR1-280	ENST00000515881	TERF2IP	Q9NYB0	399 aa		27.55	■■■□□ 2
DDR1-280	ENST00000515881	THRAP3	Q9Y2W1	955 aa	Known RBP	27.55	■■■□□ 2
DDR1-280	ENST00000515881	CRB1	P82279	1406 aa		27.55	■■■□□ 2
DDR1-280	ENST00000515881	USP31	Q70CQ4	1352 aa		27.54	■■■□□ 2
DDR1-280	ENST00000515881	TIMELESS	Q9UNS1	1208 aa		27.54	■■■□□ 2
DDR1-280	ENST00000515881	EDC4	Q6P2E9	1401 aa	Known RBP	27.53	■■■□□ 2
DDR1-280	ENST00000515881		A0A1W2PP64	1363 aa		27.53	■■■□□ 2
DDR1-280	ENST00000515881	USP47	Q96K76	1375 aa		27.53	■■■□□ 2
DDR1-280	ENST00000515881	AXIN2	Q9Y2T1	843 aa		27.53	■■■□□ 2
DDR1-280	ENST00000515881	NFAT5	O94916	1531 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms