RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 FAM83GA6ND36 823 aa25.47■■□□□ 1.67
SFXN1-212ENST00000515791 PLEKHG5O94827 1062 aa25.46■■□□□ 1.67
SFXN1-212ENST00000515791 NBPF8Q3BBV2 869 aa25.46■■□□□ 1.67
SFXN1-212ENST00000515791 ACEP12821 1306 aa25.45■■□□□ 1.66
SFXN1-212ENST00000515791 EP400Q96L91 3159 aa25.45■■□□□ 1.66
SFXN1-212ENST00000515791 HAP1P54257 671 aaPredicted RBP25.44■■□□□ 1.66
SFXN1-212ENST00000515791 NRAPQ86VF7 1730 aa25.43■■□□□ 1.66
SFXN1-212ENST00000515791 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
SFXN1-212ENST00000515791 VPS72Q15906 364 aa25.42■■□□□ 1.66
SFXN1-212ENST00000515791 PAK3O75914 559 aaPredicted RBP25.41■■□□□ 1.66
SFXN1-212ENST00000515791 CABP2Q9NPB3 220 aa25.41■■□□□ 1.66
SFXN1-212ENST00000515791 COL14A1Q05707 1796 aaKnown RBP25.4■■□□□ 1.66
SFXN1-212ENST00000515791 PHRF1Q9P1Y6 1649 aaKnown RBP25.4■■□□□ 1.66
SFXN1-212ENST00000515791 PPIP5K1Q6PFW1 1433 aa25.39■■□□□ 1.66
SFXN1-212ENST00000515791 ROCK2O75116 1388 aaKnown RBP25.39■■□□□ 1.65
SFXN1-212ENST00000515791 ATAD2Q6PL18 1390 aa25.39■■□□□ 1.65
SFXN1-212ENST00000515791 ONECUT3O60422 494 aaPredicted RBP25.38■■□□□ 1.65
SFXN1-212ENST00000515791 SRPK2P78362 688 aaKnown RBP25.38■■□□□ 1.65
SFXN1-212ENST00000515791 BRWD3Q6RI45 1802 aa25.35■■□□□ 1.65
SFXN1-212ENST00000515791 BTG4Q9NY30 223 aa25.35■■□□□ 1.65
SFXN1-212ENST00000515791 CABP1Q9NZU7 370 aa25.32■■□□□ 1.64
SFXN1-212ENST00000515791 KIAA0232Q92628 1395 aa25.31■■□□□ 1.64
SFXN1-212ENST00000515791 SSH2Q76I76 1423 aa25.31■■□□□ 1.64
SFXN1-212ENST00000515791 NUTM2GQ5VZR2 741 aa25.31■■□□□ 1.64
SFXN1-212ENST00000515791 USP19O94966 1318 aa25.31■■□□□ 1.64
SFXN1-212ENST00000515791 NRKQ7Z2Y5 1582 aa25.31■■□□□ 1.64
SFXN1-212ENST00000515791 SEPT12Q8IYM1 358 aa25.3■■□□□ 1.64
SFXN1-212ENST00000515791 EVC2Q86UK5 1308 aa25.3■■□□□ 1.64
SFXN1-212ENST00000515791 BRD4O60885 1362 aaPredicted RBP25.3■■□□□ 1.64
SFXN1-212ENST00000515791 USP6P35125 1406 aa25.29■■□□□ 1.64
SFXN1-212ENST00000515791 ABTB2Q8N961 1025 aa25.28■■□□□ 1.64
SFXN1-212ENST00000515791 SBNO2Q9Y2G9 1366 aa25.28■■□□□ 1.64
SFXN1-212ENST00000515791 PRDM11Q9NQV5 511 aa25.27■■□□□ 1.64
SFXN1-212ENST00000515791 TONSLQ96HA7 1378 aa25.27■■□□□ 1.64
SFXN1-212ENST00000515791 CCDC9Q9Y3X0 531 aaKnown RBP25.26■■□□□ 1.63
SFXN1-212ENST00000515791 ZC3H6P61129 1189 aaKnown RBP25.25■■□□□ 1.63
SFXN1-212ENST00000515791 CHRNA2Q15822 529 aa25.25■■□□□ 1.63
SFXN1-212ENST00000515791 SPATA31A5Q5VU36 1347 aa25.25■■□□□ 1.63
SFXN1-212ENST00000515791 SPATA31A7Q8IWB4 1347 aa25.25■■□□□ 1.63
SFXN1-212ENST00000515791 LMO7Q8WWI1 1683 aa25.24■■□□□ 1.63
SFXN1-212ENST00000515791 CPDO75976 1380 aa25.24■■□□□ 1.63
SFXN1-212ENST00000515791 CARD11Q9BXL7 1154 aa25.24■■□□□ 1.63
SFXN1-212ENST00000515791 AKAP12Q02952 1782 aa25.23■■□□□ 1.63
SFXN1-212ENST00000515791 CCDC125Q86Z20 511 aa25.22■■□□□ 1.63
SFXN1-212ENST00000515791 PIK3C2AO00443 1686 aa25.22■■□□□ 1.63
SFXN1-212ENST00000515791 THSD7AQ9UPZ6 1657 aa25.22■■□□□ 1.63
SFXN1-212ENST00000515791 CAMTA1Q9Y6Y1 1673 aa25.22■■□□□ 1.63
SFXN1-212ENST00000515791 CPSF1Q10570 1443 aaKnown RBP25.21■■□□□ 1.63
SFXN1-212ENST00000515791 GCP02774 474 aa25.21■■□□□ 1.63
SFXN1-212ENST00000515791 FAM98CQ17RN3 349 aaKnown RBP25.21■■□□□ 1.63
SFXN1-212ENST00000515791 NLRP13Q86W25 1043 aa25.21■■□□□ 1.63
SFXN1-212ENST00000515791 SLIT3O75094 1523 aa25.21■■□□□ 1.63
SFXN1-212ENST00000515791 SPATA31A1Q5TZJ5 1347 aa25.18■■□□□ 1.62
SFXN1-212ENST00000515791 KRT27Q7Z3Y8 459 aa25.18■■□□□ 1.62
SFXN1-212ENST00000515791 ZNF692Q9BU19 519 aaPredicted RBP25.17■■□□□ 1.62
SFXN1-212ENST00000515791 BLMP54132 1417 aaPredicted RBP25.17■■□□□ 1.62
SFXN1-212ENST00000515791 CD163L1Q9NR16 1453 aa25.15■■□□□ 1.62
SFXN1-212ENST00000515791 TTC21BQ7Z4L5 1316 aa25.15■■□□□ 1.62
SFXN1-212ENST00000515791 NLRP6P59044 892 aa25.15■■□□□ 1.62
SFXN1-212ENST00000515791 STRN4Q9NRL3 753 aa25.14■■□□□ 1.62
SFXN1-212ENST00000515791 MON2Q7Z3U7 1717 aa25.14■■□□□ 1.61
SFXN1-212ENST00000515791 COL18A1P39060 1754 aa25.13■■□□□ 1.61
SFXN1-212ENST00000515791 LARP1Q6PKG0 1096 aaKnown RBP25.11■■□□□ 1.61
SFXN1-212ENST00000515791 TESK2Q96S53 571 aa25.11■■□□□ 1.61
SFXN1-212ENST00000515791 COL5A2P05997 1499 aaPredicted RBP25.1■■□□□ 1.61
SFXN1-212ENST00000515791 TTC21AQ8NDW8 1320 aa25.1■■□□□ 1.61
SFXN1-212ENST00000515791 AATKQ6ZMQ8 1374 aa25.09■■□□□ 1.61
SFXN1-212ENST00000515791 KTN1Q86UP2 1357 aaKnown RBP25.09■■□□□ 1.61
SFXN1-212ENST00000515791 A0A0G2JS52 829 aa25.08■■□□□ 1.61
SFXN1-212ENST00000515791 MYT1Q01538 1121 aa25.08■■□□□ 1.61
SFXN1-212ENST00000515791 BARGINQ6ZT62 677 aa25.08■■□□□ 1.61
SFXN1-212ENST00000515791 PUS7Q96PZ0 661 aaKnown RBP25.08■■□□□ 1.61
SFXN1-212ENST00000515791 DEFB132Q7Z7B7 95 aa25.07■■□□□ 1.6
SFXN1-212ENST00000515791 ST20-MTHFSA0A0A6YYL1 179 aa25.06■■□□□ 1.6
SFXN1-212ENST00000515791 EVA1CP58658 441 aa25.06■■□□□ 1.6
SFXN1-212ENST00000515791 FAM182BQ5T319 152 aa25.06■■□□□ 1.6
SFXN1-212ENST00000515791 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
SFXN1-212ENST00000515791 NFAT5O94916 1531 aa25.06■■□□□ 1.6
SFXN1-212ENST00000515791 SLC12A5Q9H2X9 1139 aa25.05■■□□□ 1.6
SFXN1-212ENST00000515791 SRCAPQ6ZRS2 3230 aa25.04■■□□□ 1.6
SFXN1-212ENST00000515791 ARHGEF25Q86VW2 580 aa25.04■■□□□ 1.6
SFXN1-212ENST00000515791 USP35Q9P2H5 1018 aa25.04■■□□□ 1.6
SFXN1-212ENST00000515791 AXIN2Q9Y2T1 843 aa25.04■■□□□ 1.6
SFXN1-212ENST00000515791 USP31Q70CQ4 1352 aa25.04■■□□□ 1.6
SFXN1-212ENST00000515791 ZRANB1Q9UGI0 708 aa25.03■■□□□ 1.6
SFXN1-212ENST00000515791 TCP11L2Q8N4U5 519 aa25.02■■□□□ 1.6
SFXN1-212ENST00000515791 CRB1P82279 1406 aa25.02■■□□□ 1.6
SFXN1-212ENST00000515791 KCNH5Q8NCM2 988 aa25.01■■□□□ 1.59
SFXN1-212ENST00000515791 THRAP3Q9Y2W1 955 aaKnown RBP25.01■■□□□ 1.59
SFXN1-212ENST00000515791 RGPD1P0DJD0 1748 aa25■■□□□ 1.59
SFXN1-212ENST00000515791 TNS1Q9HBL0 1735 aaKnown RBP25■■□□□ 1.59
SFXN1-212ENST00000515791 A0A1W2PP64 1363 aa24.99■■□□□ 1.59
SFXN1-212ENST00000515791 TMC1Q8TDI8 760 aa24.99■■□□□ 1.59
SFXN1-212ENST00000515791 RGPD5Q99666 1765 aa24.99■■□□□ 1.59
SFXN1-212ENST00000515791 PARP4Q9UKK3 1724 aaKnown RBP24.99■■□□□ 1.59
SFXN1-212ENST00000515791 NME9Q86XW9 330 aa24.98■■□□□ 1.59
SFXN1-212ENST00000515791 EDC4Q6P2E9 1401 aaKnown RBP24.97■■□□□ 1.59
SFXN1-212ENST00000515791 CLSPNQ9HAW4 1339 aa24.97■■□□□ 1.59
SFXN1-212ENST00000515791 ZBTB7CA1YPR0 619 aa24.97■■□□□ 1.59
SFXN1-212ENST00000515791 SF3B2Q13435 895 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms