RNA–Protein interactions for RNA: ENST00000515746.5

ATXN3-212, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-212ENST00000515746 PLXNC1O60486 1568 aa6.55□□□□□ -1.36
ATXN3-212ENST00000515746 CLASP1Q7Z460 1538 aa6.55□□□□□ -1.36
ATXN3-212ENST00000515746 GRXCR2A6NFK2 248 aa6.54□□□□□ -1.36
ATXN3-212ENST00000515746 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-212ENST00000515746 ARSIQ5FYB1 569 aa6.54□□□□□ -1.36
ATXN3-212ENST00000515746 PANK3Q9H999 370 aa6.54□□□□□ -1.36
ATXN3-212ENST00000515746 ZSWIM6Q9HCJ5 1215 aa6.54□□□□□ -1.36
ATXN3-212ENST00000515746 PLEKHH1Q9ULM0 1364 aa6.54□□□□□ -1.36
ATXN3-212ENST00000515746 PLIN1O60240 522 aa6.53□□□□□ -1.36
ATXN3-212ENST00000515746 GPR153Q6NV75 609 aa6.53□□□□□ -1.36
ATXN3-212ENST00000515746 TRMT2AQ8IZ69 625 aaKnown RBP6.53□□□□□ -1.36
ATXN3-212ENST00000515746 DDX12PQ92771 950 aa6.53□□□□□ -1.36
ATXN3-212ENST00000515746 NPC1L1Q9UHC9 1359 aa6.53□□□□□ -1.36
ATXN3-212ENST00000515746 PIK3C2GO75747 1445 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 SYCP2Q9BX26 1530 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 KDM4FA0A1W2PPD8 638 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 MMRN1Q13201 1228 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 RBM26Q5T8P6 1007 aaKnown RBP6.52□□□□□ -1.37
ATXN3-212ENST00000515746 C20orf194Q5TEA3 1177 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 DUSP27Q5VZP5 1158 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 CENPQQ7L2Z9 268 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-212ENST00000515746 NPM2Q86SE8 214 aaKnown RBP6.52□□□□□ -1.37
ATXN3-212ENST00000515746 KHSRPQ92945 711 aaKnown RBP eCLIP6.52□□□□□ -1.37
ATXN3-212ENST00000515746 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 CDC42BPBQ9Y5S2 1711 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 ERCC6Q03468 1493 aa6.52□□□□□ -1.37
ATXN3-212ENST00000515746 SCAPERQ9BY12 1400 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 DUOX2Q9NRD8 1548 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 NEFMP07197 916 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 NUDT7P0C024 238 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 PPP2R1AP30153 589 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 TMF1P82094 1093 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 CC2D1BQ5T0F9 858 aaKnown RBP6.51□□□□□ -1.37
ATXN3-212ENST00000515746 SKAP1Q86WV1 359 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 ADAMTS8Q9UP79 889 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 SALL2Q9Y467 1007 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-212ENST00000515746 LAS1LQ9Y4W2 734 aaKnown RBP6.51□□□□□ -1.37
ATXN3-212ENST00000515746 TTC37Q6PGP7 1564 aa6.51□□□□□ -1.37
ATXN3-212ENST00000515746 PTPRTO14522 1441 aa6.5□□□□□ -1.37
ATXN3-212ENST00000515746 ABCC2Q92887 1545 aa6.5□□□□□ -1.37
ATXN3-212ENST00000515746 MADDQ8WXG6 1647 aa6.5□□□□□ -1.37
ATXN3-212ENST00000515746 IQGAP1P46940 1657 aa6.5□□□□□ -1.37
ATXN3-212ENST00000515746 SYNMO15061 1565 aa6.5□□□□□ -1.37
ATXN3-212ENST00000515746 EIF3AQ14152 1382 aaKnown RBP6.5□□□□□ -1.37
ATXN3-212ENST00000515746 OSBPP22059 807 aa6.5□□□□□ -1.37
ATXN3-212ENST00000515746 C8orf34Q49A92 452 aa6.5□□□□□ -1.37
ATXN3-212ENST00000515746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.5□□□□□ -1.37
ATXN3-212ENST00000515746 SLFN5Q08AF3 891 aa6.49□□□□□ -1.37
ATXN3-212ENST00000515746 RGL3Q3MIN7 710 aa6.49□□□□□ -1.37
ATXN3-212ENST00000515746 IL27Q8NEV9 243 aa6.49□□□□□ -1.37
ATXN3-212ENST00000515746 ZC3H15Q8WU90 426 aaKnown RBP6.49□□□□□ -1.37
ATXN3-212ENST00000515746 ASXL1Q8IXJ9 1541 aa6.49□□□□□ -1.37
ATXN3-212ENST00000515746 SCAF11Q99590 1463 aaKnown RBP6.48□□□□□ -1.37
ATXN3-212ENST00000515746 PHF14O94880 888 aa6.48□□□□□ -1.37
ATXN3-212ENST00000515746 FAM161AQ3B820 660 aa6.48□□□□□ -1.37
ATXN3-212ENST00000515746 STAC3Q96MF2 364 aa6.48□□□□□ -1.37
ATXN3-212ENST00000515746 EPAS1Q99814 870 aa6.48□□□□□ -1.37
ATXN3-212ENST00000515746 TRPM2O94759 1503 aa6.48□□□□□ -1.37
ATXN3-212ENST00000515746 ARHGAP5Q13017 1502 aa6.48□□□□□ -1.37
ATXN3-212ENST00000515746 MYO5CQ9NQX4 1742 aa6.47□□□□□ -1.37
ATXN3-212ENST00000515746 HOXB1P14653 301 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-212ENST00000515746 NFKBIBQ15653 356 aa6.47□□□□□ -1.37
ATXN3-212ENST00000515746 GPIHBP1Q8IV16 184 aa6.47□□□□□ -1.37
ATXN3-212ENST00000515746 PCDHGA10Q9Y5H3 936 aa6.47□□□□□ -1.37
ATXN3-212ENST00000515746 NEURL4Q96JN8 1562 aa6.47□□□□□ -1.37
ATXN3-212ENST00000515746 USP19O94966 1318 aa6.47□□□□□ -1.37
ATXN3-212ENST00000515746 SHROOM2Q13796 1616 aa6.47□□□□□ -1.37
ATXN3-212ENST00000515746 NUTM2FA1L443 756 aa6.46□□□□□ -1.38
ATXN3-212ENST00000515746 PLCH2O75038 1416 aa6.46□□□□□ -1.38
ATXN3-212ENST00000515746 FOSBP53539 338 aa6.46□□□□□ -1.38
ATXN3-212ENST00000515746 NGEFQ8N5V2 710 aa6.46□□□□□ -1.38
ATXN3-212ENST00000515746 LHX6Q9UPM6 363 aa6.46□□□□□ -1.38
ATXN3-212ENST00000515746 KNSTRNQ9Y448 316 aa6.46□□□□□ -1.38
ATXN3-212ENST00000515746 NKTRP30414 1462 aaKnown RBP6.46□□□□□ -1.38
ATXN3-212ENST00000515746 MYOM1P52179 1685 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 ABCC1P33527 1531 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 VWDEQ8N2E2 1590 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 RTEL1-TNFRSF6BF6WH68 1400 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 PRIM1P49642 420 aaKnown RBP6.45□□□□□ -1.38
ATXN3-212ENST00000515746 WDR43Q15061 677 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATXN3-212ENST00000515746 CDCA8Q53HL2 280 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 TYW1BQ6NUM6 668 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 SPNS2Q8IVW8 549 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 ZNF454Q8N9F8 522 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-212ENST00000515746 FBXW7Q969H0 707 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 SPHKAPQ2M3C7 1700 aa6.45□□□□□ -1.38
ATXN3-212ENST00000515746 NINLQ9Y2I6 1382 aa6.44□□□□□ -1.38
ATXN3-212ENST00000515746 TRAPPC8Q9Y2L5 1435 aa6.44□□□□□ -1.38
ATXN3-212ENST00000515746 E9PSI1 815 aa6.44□□□□□ -1.38
ATXN3-212ENST00000515746 EN1Q05925 392 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-212ENST00000515746 FRAT1Q92837 279 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-212ENST00000515746 ZDHHC16Q969W1 377 aa6.44□□□□□ -1.38
ATXN3-212ENST00000515746 RBM33Q96EV2 1170 aaKnown RBP6.44□□□□□ -1.38
ATXN3-212ENST00000515746 NLRP1Q9C000 1473 aa6.44□□□□□ -1.38
ATXN3-212ENST00000515746 KIAA1210Q9ULL0 1709 aa6.44□□□□□ -1.38
ATXN3-212ENST00000515746 ZMYM3Q14202 1370 aa6.44□□□□□ -1.38
ATXN3-212ENST00000515746 DEPDC5O75140 1603 aa6.43□□□□□ -1.38
ATXN3-212ENST00000515746 CLTCL1P53675 1640 aa6.43□□□□□ -1.38
ATXN3-212ENST00000515746 UHRF1BP1LA0JNW5 1464 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms