RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 LYPD8Q6UX82 237 aa10.06□□□□□ -0.8
LINC01088-211ENST00000515597 MAP10Q9P2G4 905 aa10.06□□□□□ -0.8
LINC01088-211ENST00000515597 LCE2AQ5TA79 106 aaPredicted RBP10.05□□□□□ -0.8
LINC01088-211ENST00000515597 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
LINC01088-211ENST00000515597 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
LINC01088-211ENST00000515597 BMP1P13497 986 aa10.04□□□□□ -0.8
LINC01088-211ENST00000515597 PRPF38BQ5VTL8 546 aaKnown RBP10.04□□□□□ -0.8
LINC01088-211ENST00000515597 TSC1Q92574 1164 aa10.04□□□□□ -0.8
LINC01088-211ENST00000515597 PER1O15534 1290 aaPredicted RBP10.03□□□□□ -0.8
LINC01088-211ENST00000515597 QPCTQ16769 361 aa10.03□□□□□ -0.8
LINC01088-211ENST00000515597 F12P00748 615 aaPredicted RBP10.02□□□□□ -0.81
LINC01088-211ENST00000515597 SENP2Q9HC62 589 aa10.02□□□□□ -0.81
LINC01088-211ENST00000515597 FOXJ1Q92949 421 aa10.01□□□□□ -0.81
LINC01088-211ENST00000515597 NUTM2BA6NNL0 878 aaPredicted RBP10□□□□□ -0.81
LINC01088-211ENST00000515597 NUTM2EB1AL46 878 aaPredicted RBP10□□□□□ -0.81
LINC01088-211ENST00000515597 CAPN5O15484 640 aaPredicted RBP10□□□□□ -0.81
LINC01088-211ENST00000515597 WFS1O76024 890 aa10□□□□□ -0.81
LINC01088-211ENST00000515597 VARSP26640 1264 aaKnown RBP10□□□□□ -0.81
LINC01088-211ENST00000515597 NFX1Q12986 1120 aaKnown RBP10□□□□□ -0.81
LINC01088-211ENST00000515597 NUTM2DQ5VT03 806 aaPredicted RBP10□□□□□ -0.81
LINC01088-211ENST00000515597 TRIM46Q7Z4K8 759 aa10□□□□□ -0.81
LINC01088-211ENST00000515597 NUTM2AQ8IVF1 878 aaPredicted RBP10□□□□□ -0.81
LINC01088-211ENST00000515597 LILRB3O75022 631 aa9.98□□□□□ -0.81
LINC01088-211ENST00000515597 NNTQ13423 1086 aa9.98□□□□□ -0.81
LINC01088-211ENST00000515597 KIFC2Q96AC6 838 aa9.98□□□□□ -0.81
LINC01088-211ENST00000515597 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
LINC01088-211ENST00000515597 RTL5Q5HYW3 569 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-211ENST00000515597 FAM174AQ8TBP5 190 aa9.96□□□□□ -0.82
LINC01088-211ENST00000515597 POLR3EQ9NVU0 708 aa9.96□□□□□ -0.82
LINC01088-211ENST00000515597 PLEKHG3A1L390 1219 aa9.95□□□□□ -0.82
LINC01088-211ENST00000515597 TUSC1Q2TAM9 212 aa9.95□□□□□ -0.82
LINC01088-211ENST00000515597 LCE2CQ5TA81 110 aa9.95□□□□□ -0.82
LINC01088-211ENST00000515597 ARID5BQ14865 1188 aa9.94□□□□□ -0.82
LINC01088-211ENST00000515597 AGERQ15109 404 aa9.94□□□□□ -0.82
LINC01088-211ENST00000515597 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
LINC01088-211ENST00000515597 MPNDQ8N594 471 aa9.94□□□□□ -0.82
LINC01088-211ENST00000515597 TERTO14746 1132 aaKnown RBP9.93□□□□□ -0.82
LINC01088-211ENST00000515597 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
LINC01088-211ENST00000515597 ADH1CP00326 375 aa9.92□□□□□ -0.82
LINC01088-211ENST00000515597 TIMP2P16035 220 aa9.92□□□□□ -0.82
LINC01088-211ENST00000515597 WDR4P57081 412 aaKnown RBP9.91□□□□□ -0.82
LINC01088-211ENST00000515597 GPBP1L1Q9HC44 474 aaPredicted RBP9.91□□□□□ -0.82
LINC01088-211ENST00000515597 ZFP42Q96MM3 310 aa9.9□□□□□ -0.82
LINC01088-211ENST00000515597 CDK15Q96Q40 435 aa9.9□□□□□ -0.82
LINC01088-211ENST00000515597 RSPH6AQ9H0K4 717 aa9.9□□□□□ -0.82
LINC01088-211ENST00000515597 NR3C2P08235 984 aa9.89□□□□□ -0.83
LINC01088-211ENST00000515597 BPHLQ86WA6 291 aaPredicted RBP9.89□□□□□ -0.83
LINC01088-211ENST00000515597 MRPL14Q6P1L8 145 aaKnown RBP9.88□□□□□ -0.83
LINC01088-211ENST00000515597 KLF16Q9BXK1 252 aaPredicted RBP9.88□□□□□ -0.83
LINC01088-211ENST00000515597 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
LINC01088-211ENST00000515597 NBPF14Q5TI25 921 aa9.87□□□□□ -0.83
LINC01088-211ENST00000515597 ARMC2Q8NEN0 867 aa9.87□□□□□ -0.83
LINC01088-211ENST00000515597 BCANQ96GW7 911 aa9.87□□□□□ -0.83
LINC01088-211ENST00000515597 PURBQ96QR8 312 aaKnown RBP9.87□□□□□ -0.83
LINC01088-211ENST00000515597 MAGEB6P1A0A0J9YX57 407 aa9.86□□□□□ -0.83
LINC01088-211ENST00000515597 ZIC2O95409 532 aaPredicted RBP9.86□□□□□ -0.83
LINC01088-211ENST00000515597 VEGFBP49765 207 aa9.86□□□□□ -0.83
LINC01088-211ENST00000515597 CTDSPL2Q05D32 466 aa9.86□□□□□ -0.83
LINC01088-211ENST00000515597 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
LINC01088-211ENST00000515597 ITPKCQ96DU7 683 aa9.86□□□□□ -0.83
LINC01088-211ENST00000515597 C1QTNF2Q9BXJ5 285 aa9.86□□□□□ -0.83
LINC01088-211ENST00000515597 KDM4CQ9H3R0 1056 aa9.86□□□□□ -0.83
LINC01088-211ENST00000515597 WIPF1O43516 503 aa9.85□□□□□ -0.83
LINC01088-211ENST00000515597 GRM5P41594 1212 aa9.85□□□□□ -0.83
LINC01088-211ENST00000515597 SH3BP5LQ7L8J4 393 aa9.85□□□□□ -0.83
LINC01088-211ENST00000515597 SH3RF1Q7Z6J0 888 aa9.85□□□□□ -0.83
LINC01088-211ENST00000515597 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
LINC01088-211ENST00000515597 FAM117AQ9C073 453 aa9.85□□□□□ -0.83
LINC01088-211ENST00000515597 NXF1Q9UBU9 619 aaKnown RBP9.85□□□□□ -0.83
LINC01088-211ENST00000515597 SOBPA7XYQ1 873 aa9.84□□□□□ -0.83
LINC01088-211ENST00000515597 FSHRP23945 695 aa9.84□□□□□ -0.83
LINC01088-211ENST00000515597 NR5A1Q13285 461 aa9.84□□□□□ -0.83
LINC01088-211ENST00000515597 SCARF1Q14162 830 aa9.84□□□□□ -0.83
LINC01088-211ENST00000515597 LRRN4Q8WUT4 740 aa9.84□□□□□ -0.83
LINC01088-211ENST00000515597 PROCA1Q8NCQ7 364 aaPredicted RBP9.83□□□□□ -0.84
LINC01088-211ENST00000515597 SKIV2LQ15477 1246 aaKnown RBP9.82□□□□□ -0.84
LINC01088-211ENST00000515597 SH3D19Q5HYK7 790 aa9.82□□□□□ -0.84
LINC01088-211ENST00000515597 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
LINC01088-211ENST00000515597 C6orf118Q5T5N4 469 aa9.81□□□□□ -0.84
LINC01088-211ENST00000515597 VASH1Q7L8A9 365 aaPredicted RBP9.81□□□□□ -0.84
LINC01088-211ENST00000515597 SLC16A10Q8TF71 515 aa9.81□□□□□ -0.84
LINC01088-211ENST00000515597 TRMT44Q8IYL2 757 aaKnown RBP9.8□□□□□ -0.84
LINC01088-211ENST00000515597 MAP4K5Q9Y4K4 846 aa9.8□□□□□ -0.84
LINC01088-211ENST00000515597 ERFEQ4G0M1 354 aa9.79□□□□□ -0.84
LINC01088-211ENST00000515597 DDRGK1Q96HY6 314 aa9.79□□□□□ -0.84
LINC01088-211ENST00000515597 H3BM21 787 aa9.78□□□□□ -0.84
LINC01088-211ENST00000515597 GMPRP36959 345 aa9.78□□□□□ -0.84
LINC01088-211ENST00000515597 INSM1Q01101 510 aaPredicted RBP9.78□□□□□ -0.84
LINC01088-211ENST00000515597 NR6A1Q15406 480 aa9.78□□□□□ -0.84
LINC01088-211ENST00000515597 GPKOWQ92917 476 aaPredicted RBP eCLIP9.78□□□□□ -0.84
LINC01088-211ENST00000515597 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC01088-211ENST00000515597 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
LINC01088-211ENST00000515597 MEIOBQ8N635 442 aa9.77□□□□□ -0.85
LINC01088-211ENST00000515597 ERBB4Q15303 1308 aa9.77□□□□□ -0.85
LINC01088-211ENST00000515597 AP1G2O75843 785 aa9.76□□□□□ -0.85
LINC01088-211ENST00000515597 PPP2R2DQ66LE6 453 aa9.76□□□□□ -0.85
LINC01088-211ENST00000515597 IRF7Q92985 503 aa9.76□□□□□ -0.85
LINC01088-211ENST00000515597 ARHGAP9Q9BRR9 750 aa9.76□□□□□ -0.85
LINC01088-211ENST00000515597 STK17AQ9UEE5 414 aa9.76□□□□□ -0.85
LINC01088-211ENST00000515597 FKBPLQ9UIM3 349 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms