RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 BRD4O60885 1362 aaPredicted RBP36.26■■■■□ 3.39
DDR1-279ENST00000515529 USP6P35125 1406 aa36.24■■■■□ 3.39
DDR1-279ENST00000515529 HDGFL2Q7Z4V5 671 aaPredicted RBP36.23■■■■□ 3.39
DDR1-279ENST00000515529 NINLQ9Y2I6 1382 aa36.23■■■■□ 3.39
DDR1-279ENST00000515529 ALS2Q96Q42 1657 aa36.23■■■■□ 3.39
DDR1-279ENST00000515529 C8orf37Q96NL8 207 aa36.21■■■■□ 3.39
DDR1-279ENST00000515529 SLC12A5Q9H2X9 1139 aa36.21■■■■□ 3.39
DDR1-279ENST00000515529 TERF2IPQ9NYB0 399 aa36.21■■■■□ 3.39
DDR1-279ENST00000515529 KTN1Q86UP2 1357 aaKnown RBP36.2■■■■□ 3.39
DDR1-279ENST00000515529 ABTB2Q8N961 1025 aa36.2■■■■□ 3.39
DDR1-279ENST00000515529 CABLES1Q8TDN4 633 aa36.2■■■■□ 3.39
DDR1-279ENST00000515529 CPSF1Q10570 1443 aaKnown RBP36.17■■■■□ 3.38
DDR1-279ENST00000515529 NGLY1Q96IV0 654 aa36.17■■■■□ 3.38
DDR1-279ENST00000515529 NUTM2GQ5VZR2 741 aa36.16■■■■□ 3.38
DDR1-279ENST00000515529 AKAP12Q02952 1782 aa36.15■■■■□ 3.38
DDR1-279ENST00000515529 ZNF772Q68DY9 489 aaPredicted RBP36.12■■■■□ 3.37
DDR1-279ENST00000515529 POLR3GLQ9BT43 218 aa36.12■■■■□ 3.37
DDR1-279ENST00000515529 AFF2P51816 1311 aa36.11■■■■□ 3.37
DDR1-279ENST00000515529 TTC21BQ7Z4L5 1316 aa36.11■■■■□ 3.37
DDR1-279ENST00000515529 NLRP13Q86W25 1043 aa36.11■■■■□ 3.37
DDR1-279ENST00000515529 TTC21AQ8NDW8 1320 aa36.1■■■■□ 3.37
DDR1-279ENST00000515529 RGS17Q9UGC6 210 aaPredicted RBP36.09■■■■□ 3.37
DDR1-279ENST00000515529 A0A1W2PP64 1363 aa36.09■■■■□ 3.37
DDR1-279ENST00000515529 CD163L1Q9NR16 1453 aa36.09■■■■□ 3.37
DDR1-279ENST00000515529 SSH2Q76I76 1423 aa36.08■■■■□ 3.37
DDR1-279ENST00000515529 ABCA3Q99758 1704 aa36.08■■■■□ 3.37
DDR1-279ENST00000515529 NLRP6P59044 892 aa36.07■■■■□ 3.36
DDR1-279ENST00000515529 MON2Q7Z3U7 1717 aa36.07■■■■□ 3.36
DDR1-279ENST00000515529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.06■■■■□ 3.36
DDR1-279ENST00000515529 MARF1Q9Y4F3 1742 aaKnown RBP36.05■■■■□ 3.36
DDR1-279ENST00000515529 EDC4Q6P2E9 1401 aaKnown RBP36.04■■■■□ 3.36
DDR1-279ENST00000515529 ANKRD36BQ8N2N9 1353 aa36.03■■■■□ 3.36
DDR1-279ENST00000515529 NRKQ7Z2Y5 1582 aa36.02■■■■□ 3.36
DDR1-279ENST00000515529 USP21Q9UK80 565 aa36.01■■■■□ 3.36
DDR1-279ENST00000515529 USP19O94966 1318 aa36■■■■□ 3.35
DDR1-279ENST00000515529 FNBP4Q8N3X1 1017 aaPredicted RBP35.99■■■■□ 3.35
DDR1-279ENST00000515529 PIK3C2AO00443 1686 aa35.99■■■■□ 3.35
DDR1-279ENST00000515529 CRYBG1Q9Y4K1 1723 aa35.99■■■■□ 3.35
DDR1-279ENST00000515529 PHRF1Q9P1Y6 1649 aaKnown RBP35.98■■■■□ 3.35
DDR1-279ENST00000515529 POTEAQ6S8J7 498 aa35.98■■■■□ 3.35
DDR1-279ENST00000515529 PRDM11Q9NQV5 511 aa35.98■■■■□ 3.35
DDR1-279ENST00000515529 ZC3H6P61129 1189 aaKnown RBP35.95■■■■□ 3.35
DDR1-279ENST00000515529 GCP02774 474 aa35.94■■■■□ 3.34
DDR1-279ENST00000515529 NME9Q86XW9 330 aa35.94■■■■□ 3.34
DDR1-279ENST00000515529 FAM83GA6ND36 823 aa35.93■■■■□ 3.34
DDR1-279ENST00000515529 QTRT2Q9H974 415 aaKnown RBP35.93■■■■□ 3.34
DDR1-279ENST00000515529 MYOM1P52179 1685 aa35.93■■■■□ 3.34
DDR1-279ENST00000515529 KIAA0232Q92628 1395 aa35.92■■■■□ 3.34
DDR1-279ENST00000515529 TRPC5Q9UL62 973 aaPredicted RBP35.91■■■■□ 3.34
DDR1-279ENST00000515529 KCNH5Q8NCM2 988 aa35.9■■■■□ 3.34
DDR1-279ENST00000515529 SLIT2O94813 1529 aa35.89■■■■□ 3.34
DDR1-279ENST00000515529 ZEB1P37275 1124 aaPredicted RBP35.89■■■■□ 3.34
DDR1-279ENST00000515529 ILDR2Q71H61 639 aa35.89■■■■□ 3.34
DDR1-279ENST00000515529 UNC5CLQ8IV45 518 aa35.89■■■■□ 3.34
DDR1-279ENST00000515529 C11orf95C9JLR9 678 aaPredicted RBP35.88■■■■□ 3.33
DDR1-279ENST00000515529 COL14A1Q05707 1796 aaKnown RBP35.88■■■■□ 3.33
DDR1-279ENST00000515529 USP31Q70CQ4 1352 aa35.88■■■■□ 3.33
DDR1-279ENST00000515529 SLIT3O75094 1523 aa35.88■■■■□ 3.33
DDR1-279ENST00000515529 ZBTB7CA1YPR0 619 aa35.87■■■■□ 3.33
DDR1-279ENST00000515529 SOX12O15370 315 aa35.87■■■■□ 3.33
DDR1-279ENST00000515529 ZRANB1Q9UGI0 708 aa35.87■■■■□ 3.33
DDR1-279ENST00000515529 BCL9LQ86UU0 1499 aa35.86■■■■□ 3.33
DDR1-279ENST00000515529 RXRBP28702 533 aa35.86■■■■□ 3.33
DDR1-279ENST00000515529 CHRNA2Q15822 529 aa35.86■■■■□ 3.33
DDR1-279ENST00000515529 BTG4Q9NY30 223 aa35.86■■■■□ 3.33
DDR1-279ENST00000515529 PLCH1Q4KWH8 1693 aa35.86■■■■□ 3.33
DDR1-279ENST00000515529 CPDO75976 1380 aa35.85■■■■□ 3.33
DDR1-279ENST00000515529 KIF7Q2M1P5 1343 aa35.84■■■■□ 3.33
DDR1-279ENST00000515529 NWD2Q9ULI1 1742 aa35.83■■■■□ 3.33
DDR1-279ENST00000515529 COG3Q96JB2 828 aa35.83■■■■□ 3.33
DDR1-279ENST00000515529 NSD3Q9BZ95 1437 aa35.83■■■■□ 3.33
DDR1-279ENST00000515529 RBM6P78332 1123 aaKnown RBP35.82■■■■□ 3.32
DDR1-279ENST00000515529 ATRNO75882 1429 aa35.81■■■■□ 3.32
DDR1-279ENST00000515529 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.8■■■■□ 3.32
DDR1-279ENST00000515529 CCDC9Q9Y3X0 531 aaKnown RBP35.8■■■■□ 3.32
DDR1-279ENST00000515529 CARD14Q9BXL6 1004 aa35.79■■■■□ 3.32
DDR1-279ENST00000515529 USP54Q70EL1 1684 aa35.78■■■■□ 3.32
DDR1-279ENST00000515529 OVOS2A0A0J9YW53 1432 aa35.77■■■■□ 3.32
DDR1-279ENST00000515529 OVOS2Q6IE36 1432 aa35.77■■■■□ 3.32
DDR1-279ENST00000515529 PANK3Q9H999 370 aa35.77■■■■□ 3.32
DDR1-279ENST00000515529 FYB1O15117 783 aa35.75■■■■□ 3.31
DDR1-279ENST00000515529 VPS72Q15906 364 aa35.75■■■■□ 3.31
DDR1-279ENST00000515529 GGNBP2Q9H3C7 697 aa35.75■■■■□ 3.31
DDR1-279ENST00000515529 CGNL1Q0VF96 1302 aa35.75■■■■□ 3.31
DDR1-279ENST00000515529 EVA1CP58658 441 aa35.74■■■■□ 3.31
DDR1-279ENST00000515529 GJD4Q96KN9 370 aaPredicted RBP35.73■■■■□ 3.31
DDR1-279ENST00000515529 STRN4Q9NRL3 753 aa35.73■■■■□ 3.31
DDR1-279ENST00000515529 CCDC7Q96M83 1385 aa35.73■■■■□ 3.31
DDR1-279ENST00000515529 NFAT5O94916 1531 aa35.73■■■■□ 3.31
DDR1-279ENST00000515529 ARHGEF25Q86VW2 580 aa35.72■■■■□ 3.31
DDR1-279ENST00000515529 AATKQ6ZMQ8 1374 aa35.72■■■■□ 3.31
DDR1-279ENST00000515529 NRAPQ86VF7 1730 aa35.7■■■■□ 3.31
DDR1-279ENST00000515529 KIF20BQ96Q89 1820 aa35.7■■■■□ 3.31
DDR1-279ENST00000515529 WASHC2AQ641Q2 1341 aa35.68■■■■□ 3.3
DDR1-279ENST00000515529 CDK12Q9NYV4 1490 aaPredicted RBP35.67■■■■□ 3.3
DDR1-279ENST00000515529 LMO7Q8WWI1 1683 aa35.66■■■■□ 3.3
DDR1-279ENST00000515529 CAMTA1Q9Y6Y1 1673 aa35.65■■■■□ 3.3
DDR1-279ENST00000515529 KNSTRNQ9Y448 316 aa35.65■■■■□ 3.3
DDR1-279ENST00000515529 COL5A2P05997 1499 aaPredicted RBP35.6■■■■□ 3.29
DDR1-279ENST00000515529 GLI3P10071 1580 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms