RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 STRCP1A6NGW2 1772 aa12.21□□□□□ -0.45
CPNE4-213ENST00000515418 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
CPNE4-213ENST00000515418 ESCO1Q5FWF5 840 aa12.21□□□□□ -0.45
CPNE4-213ENST00000515418 FMN2Q9NZ56 1722 aa12.21□□□□□ -0.45
CPNE4-213ENST00000515418 COG3Q96JB2 828 aa12.21□□□□□ -0.46
CPNE4-213ENST00000515418 ANKRD26Q9UPS8 1709 aa12.21□□□□□ -0.46
CPNE4-213ENST00000515418 USP6P35125 1406 aa12.21□□□□□ -0.46
CPNE4-213ENST00000515418 ADGRL3Q9HAR2 1447 aa12.21□□□□□ -0.46
CPNE4-213ENST00000515418 ORAI2Q96SN7 254 aa12.2□□□□□ -0.46
CPNE4-213ENST00000515418 POLKQ9UBT6 870 aa12.2□□□□□ -0.46
CPNE4-213ENST00000515418 MAP2P11137 1827 aaKnown RBP12.2□□□□□ -0.46
CPNE4-213ENST00000515418 CFAP53Q96M91 514 aa12.19□□□□□ -0.46
CPNE4-213ENST00000515418 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
CPNE4-213ENST00000515418 RRS1Q15050 365 aaKnown RBP12.19□□□□□ -0.46
CPNE4-213ENST00000515418 NUTM2GQ5VZR2 741 aa12.19□□□□□ -0.46
CPNE4-213ENST00000515418 C19orf44Q9H6X5 657 aa12.19□□□□□ -0.46
CPNE4-213ENST00000515418 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
CPNE4-213ENST00000515418 ANKARQ7Z5J8 1434 aa12.19□□□□□ -0.46
CPNE4-213ENST00000515418 NWD1Q149M9 1564 aa12.19□□□□□ -0.46
CPNE4-213ENST00000515418 SOX12O15370 315 aa12.18□□□□□ -0.46
CPNE4-213ENST00000515418 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
CPNE4-213ENST00000515418 BLMP54132 1417 aaPredicted RBP12.18□□□□□ -0.46
CPNE4-213ENST00000515418 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
CPNE4-213ENST00000515418 SSH2Q76I76 1423 aa12.18□□□□□ -0.46
CPNE4-213ENST00000515418 ZNF335Q9H4Z2 1342 aaPredicted RBP12.17□□□□□ -0.46
CPNE4-213ENST00000515418 APAF1O14727 1248 aa12.17□□□□□ -0.46
CPNE4-213ENST00000515418 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
CPNE4-213ENST00000515418 FOXO3O43524 673 aa12.16□□□□□ -0.46
CPNE4-213ENST00000515418 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-213ENST00000515418 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
CPNE4-213ENST00000515418 XPCQ01831 940 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-213ENST00000515418 PSME1Q06323 249 aa12.16□□□□□ -0.46
CPNE4-213ENST00000515418 SHPRHQ149N8 1683 aa12.16□□□□□ -0.46
CPNE4-213ENST00000515418 CDCA7LQ96GN5 454 aa12.16□□□□□ -0.46
CPNE4-213ENST00000515418 NRKQ7Z2Y5 1582 aa12.15□□□□□ -0.46
CPNE4-213ENST00000515418 NLRP6P59044 892 aa12.15□□□□□ -0.46
CPNE4-213ENST00000515418 SUPT16HQ9Y5B9 1047 aaKnown RBP12.15□□□□□ -0.46
CPNE4-213ENST00000515418 INSRP06213 1382 aa12.15□□□□□ -0.47
CPNE4-213ENST00000515418 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
CPNE4-213ENST00000515418 ATF3P18847 181 aa12.14□□□□□ -0.47
CPNE4-213ENST00000515418 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
CPNE4-213ENST00000515418 TTC21AQ8NDW8 1320 aa12.14□□□□□ -0.47
CPNE4-213ENST00000515418 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
CPNE4-213ENST00000515418 NEUROD2Q15784 382 aa12.13□□□□□ -0.47
CPNE4-213ENST00000515418 PNPLA6Q8IY17 1366 aa12.13□□□□□ -0.47
CPNE4-213ENST00000515418 DDX17Q92841 729 aaKnown RBP12.12□□□□□ -0.47
CPNE4-213ENST00000515418 NUDCQ9Y266 331 aa12.12□□□□□ -0.47
CPNE4-213ENST00000515418 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
CPNE4-213ENST00000515418 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-213ENST00000515418 OVOS2A0A0J9YW53 1432 aa12.12□□□□□ -0.47
CPNE4-213ENST00000515418 OVOS2Q6IE36 1432 aa12.12□□□□□ -0.47
CPNE4-213ENST00000515418 AATKQ6ZMQ8 1374 aa12.12□□□□□ -0.47
CPNE4-213ENST00000515418 C1orf167Q5SNV9 1468 aa12.11□□□□□ -0.47
CPNE4-213ENST00000515418 TCP11L2Q8N4U5 519 aa12.11□□□□□ -0.47
CPNE4-213ENST00000515418 RUNDC1Q96C34 613 aa12.11□□□□□ -0.47
CPNE4-213ENST00000515418 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
CPNE4-213ENST00000515418 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
CPNE4-213ENST00000515418 IL13P35225 146 aa12.1□□□□□ -0.47
CPNE4-213ENST00000515418 HSP90AB2PQ58FF8 381 aa12.1□□□□□ -0.47
CPNE4-213ENST00000515418 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
CPNE4-213ENST00000515418 SMG6Q86US8 1419 aaKnown RBP12.1□□□□□ -0.47
CPNE4-213ENST00000515418 USP31Q70CQ4 1352 aa12.09□□□□□ -0.47
CPNE4-213ENST00000515418 HMOX1P09601 288 aa12.09□□□□□ -0.47
CPNE4-213ENST00000515418 KRT28Q7Z3Y7 464 aa12.09□□□□□ -0.47
CPNE4-213ENST00000515418 CADPS2Q86UW7 1296 aa12.09□□□□□ -0.47
CPNE4-213ENST00000515418 FKBP8Q14318 412 aa12.09□□□□□ -0.47
CPNE4-213ENST00000515418 PLEKHF1Q96S99 279 aa12.09□□□□□ -0.47
CPNE4-213ENST00000515418 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
CPNE4-213ENST00000515418 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
CPNE4-213ENST00000515418 LRRC7Q96NW7 1537 aa12.08□□□□□ -0.47
CPNE4-213ENST00000515418 MST1RQ04912 1400 aa12.08□□□□□ -0.48
CPNE4-213ENST00000515418 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
CPNE4-213ENST00000515418 MSH6P52701 1360 aa12.08□□□□□ -0.48
CPNE4-213ENST00000515418 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-213ENST00000515418 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
CPNE4-213ENST00000515418 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
CPNE4-213ENST00000515418 NCOA3Q9Y6Q9 1424 aa12.08□□□□□ -0.48
CPNE4-213ENST00000515418 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
CPNE4-213ENST00000515418 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
CPNE4-213ENST00000515418 WWC1Q8IX03 1113 aa12.07□□□□□ -0.48
CPNE4-213ENST00000515418 AMPHP49418 695 aa12.06□□□□□ -0.48
CPNE4-213ENST00000515418 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
CPNE4-213ENST00000515418 PEAK1Q9H792 1746 aa12.06□□□□□ -0.48
CPNE4-213ENST00000515418 MARF1Q9Y4F3 1742 aaKnown RBP12.06□□□□□ -0.48
CPNE4-213ENST00000515418 CDK12Q9NYV4 1490 aaPredicted RBP12.05□□□□□ -0.48
CPNE4-213ENST00000515418 FCHSD2O94868 740 aa12.05□□□□□ -0.48
CPNE4-213ENST00000515418 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
CPNE4-213ENST00000515418 PHACTR3Q96KR7 559 aa12.05□□□□□ -0.48
CPNE4-213ENST00000515418 SLAIN2Q9P270 581 aa12.05□□□□□ -0.48
CPNE4-213ENST00000515418 ZBTB7CA1YPR0 619 aa12.05□□□□□ -0.48
CPNE4-213ENST00000515418 RSPH6AQ9H0K4 717 aa12.05□□□□□ -0.48
CPNE4-213ENST00000515418 DCCP43146 1447 aa12.04□□□□□ -0.48
CPNE4-213ENST00000515418 SLFN5Q08AF3 891 aa12.04□□□□□ -0.48
CPNE4-213ENST00000515418 NEFLP07196 543 aa12.03□□□□□ -0.48
CPNE4-213ENST00000515418 TMPOP42166 694 aaKnown RBP12.03□□□□□ -0.48
CPNE4-213ENST00000515418 BRINP3Q76B58 766 aa12.03□□□□□ -0.48
CPNE4-213ENST00000515418 AEBP1Q8IUX7 1158 aa12.03□□□□□ -0.48
CPNE4-213ENST00000515418 MAPK8IP3Q9UPT6 1336 aa12.03□□□□□ -0.48
CPNE4-213ENST00000515418 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
CPNE4-213ENST00000515418 SULT6B1Q6IMI4 303 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms