RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 ZBBXA8MT70 800 aa7.21□□□□□ -1.26
HERC6-208ENST00000515365 TBC1D9Q6ZT07 1266 aa7.21□□□□□ -1.26
HERC6-208ENST00000515365 STAC3Q96MF2 364 aa7.21□□□□□ -1.26
HERC6-208ENST00000515365 MAFBQ9Y5Q3 323 aaPredicted RBP7.21□□□□□ -1.26
HERC6-208ENST00000515365 CSB-PGBD3P0DP91 1061 aa7.2□□□□□ -1.26
HERC6-208ENST00000515365 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
HERC6-208ENST00000515365 ANKRD13DQ6ZTN6 518 aa7.2□□□□□ -1.26
HERC6-208ENST00000515365 WNT2BQ93097 391 aa7.2□□□□□ -1.26
HERC6-208ENST00000515365 MAP10Q9P2G4 905 aa7.2□□□□□ -1.26
HERC6-208ENST00000515365 ATP9BO43861 1147 aa7.19□□□□□ -1.26
HERC6-208ENST00000515365 MSS51Q4VC12 460 aa7.19□□□□□ -1.26
HERC6-208ENST00000515365 DXOO77932 396 aaKnown RBP7.18□□□□□ -1.26
HERC6-208ENST00000515365 ATG7O95352 703 aa7.18□□□□□ -1.26
HERC6-208ENST00000515365 CCNYL3P0C7X3 344 aa7.17□□□□□ -1.26
HERC6-208ENST00000515365 FAM160A2Q8N612 972 aaPredicted RBP7.17□□□□□ -1.26
HERC6-208ENST00000515365 NFATC2IPQ8NCF5 419 aa7.17□□□□□ -1.26
HERC6-208ENST00000515365 WBP1LQ9NX94 342 aa7.17□□□□□ -1.26
HERC6-208ENST00000515365 PATL2C9JE40 543 aaKnown RBP7.16□□□□□ -1.26
HERC6-208ENST00000515365 PIK3CDO00329 1044 aa7.16□□□□□ -1.26
HERC6-208ENST00000515365 BRD1O95696 1058 aa7.16□□□□□ -1.26
HERC6-208ENST00000515365 CTHP32929 405 aa7.16□□□□□ -1.26
HERC6-208ENST00000515365 MMP16P51512 607 aa7.16□□□□□ -1.26
HERC6-208ENST00000515365 CDCA8Q53HL2 280 aa7.16□□□□□ -1.26
HERC6-208ENST00000515365 SPSB2Q99619 263 aa7.16□□□□□ -1.26
HERC6-208ENST00000515365 EVA1BQ9NVM1 165 aa7.16□□□□□ -1.26
HERC6-208ENST00000515365 GPSM3Q9Y4H4 160 aa7.16□□□□□ -1.26
HERC6-208ENST00000515365 TMEM88BA6NKF7 163 aa7.15□□□□□ -1.26
HERC6-208ENST00000515365 KCNA1Q09470 495 aa7.15□□□□□ -1.26
HERC6-208ENST00000515365 KCNH2Q12809 1159 aa7.15□□□□□ -1.26
HERC6-208ENST00000515365 KANK4Q5T7N3 995 aaPredicted RBP7.15□□□□□ -1.26
HERC6-208ENST00000515365 GPKOWQ92917 476 aaPredicted RBP eCLIP7.15□□□□□ -1.26
HERC6-208ENST00000515365 NUDT12Q9BQG2 462 aa7.15□□□□□ -1.26
HERC6-208ENST00000515365 GZF1Q9H116 711 aaPredicted RBP7.15□□□□□ -1.26
HERC6-208ENST00000515365 CARNS1A5YM72 827 aa7.14□□□□□ -1.27
HERC6-208ENST00000515365 PDXDC2PQ6P474 469 aa7.14□□□□□ -1.27
HERC6-208ENST00000515365 NPM2Q86SE8 214 aaKnown RBP7.14□□□□□ -1.27
HERC6-208ENST00000515365 ARMC2Q8NEN0 867 aa7.14□□□□□ -1.27
HERC6-208ENST00000515365 OCSTAMPQ9BR26 566 aa7.14□□□□□ -1.27
HERC6-208ENST00000515365 PRDM9Q9NQV7 894 aa7.14□□□□□ -1.27
HERC6-208ENST00000515365 COPS2P61201 443 aa7.13□□□□□ -1.27
HERC6-208ENST00000515365 PTK2Q05397 1052 aa7.13□□□□□ -1.27
HERC6-208ENST00000515365 THSD4Q6ZMP0 1018 aa7.13□□□□□ -1.27
HERC6-208ENST00000515365 PLEKHM2Q8IWE5 1019 aa7.13□□□□□ -1.27
HERC6-208ENST00000515365 VRTNQ9H8Y1 702 aa7.13□□□□□ -1.27
HERC6-208ENST00000515365 USP17L3A6NCW0 530 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 USP17L4A6NCW7 530 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 USP17L5A8MUK1 530 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 SKIP12755 728 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 RANGAP1P46060 587 aaPredicted RBP7.12□□□□□ -1.27
HERC6-208ENST00000515365 ELOAQ14241 798 aaKnown RBP7.12□□□□□ -1.27
HERC6-208ENST00000515365 NBPF14Q5TI25 921 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 USP17L2Q6R6M4 530 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 USP17L1Q7RTZ2 530 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 FAM174AQ8TBP5 190 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 ZNF592Q92610 1267 aa7.12□□□□□ -1.27
HERC6-208ENST00000515365 MCCD1P59942 119 aaPredicted RBP7.11□□□□□ -1.27
HERC6-208ENST00000515365 TMCO4Q5TGY1 634 aa7.11□□□□□ -1.27
HERC6-208ENST00000515365 CEP126Q9P2H0 1117 aa7.11□□□□□ -1.27
HERC6-208ENST00000515365 TLL1O43897 1013 aa7.1□□□□□ -1.27
HERC6-208ENST00000515365 ZPR1O75312 459 aa7.1□□□□□ -1.27
HERC6-208ENST00000515365 ADH1BP00325 375 aa7.1□□□□□ -1.27
HERC6-208ENST00000515365 NYAP1Q6ZVC0 841 aa7.1□□□□□ -1.27
HERC6-208ENST00000515365 PHTF2Q8N3S3 785 aa7.1□□□□□ -1.27
HERC6-208ENST00000515365 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
HERC6-208ENST00000515365 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
HERC6-208ENST00000515365 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
HERC6-208ENST00000515365 PCDHB9Q9Y5E1 797 aa7.09□□□□□ -1.27
HERC6-208ENST00000515365 MFAP1P55081 439 aaKnown RBP7.08□□□□□ -1.28
HERC6-208ENST00000515365 SLFNL1Q499Z3 407 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 TMEM164Q5U3C3 297 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 SH3BP5LQ7L8J4 393 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 DEPDC4Q8N2C3 294 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 ADAM32Q8TC27 787 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 STK32AQ8WU08 396 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 MTRQ99707 1265 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 ARHGAP9Q9BRR9 750 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 UNC93B1Q9H1C4 597 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 CHIC2Q9UKJ5 165 aa7.08□□□□□ -1.28
HERC6-208ENST00000515365 NOVA2Q9UNW9 492 aaKnown RBP7.08□□□□□ -1.28
HERC6-208ENST00000515365 FAM196BA6NMK8 535 aa7.07□□□□□ -1.28
HERC6-208ENST00000515365 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
HERC6-208ENST00000515365 RNF135Q8IUD6 432 aa7.07□□□□□ -1.28
HERC6-208ENST00000515365 RGS22Q8NE09 1264 aa7.07□□□□□ -1.28
HERC6-208ENST00000515365 KCTD12Q96CX2 325 aaKnown RBP7.07□□□□□ -1.28
HERC6-208ENST00000515365 USP17L15C9J2P7 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L10C9JJH3 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L13C9JLJ4 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L12C9JPN9 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L11C9JVI0 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L21D6R901 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L18D6R9N7 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L22D6RA61 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L17D6RBQ6 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L19D6RCP7 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L20D6RJB6 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 LZTS3O60299 673 aaPredicted RBP7.06□□□□□ -1.28
HERC6-208ENST00000515365 USP17L24Q0WX57 530 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 NCOA4Q13772 614 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 CRTC2Q53ET0 693 aaPredicted RBP7.06□□□□□ -1.28
HERC6-208ENST00000515365 TJAP1Q5JTD0 557 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms