RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 ADAMTS19Q8TE59 1207 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 CFAP70Q5T0N1 1121 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 NUTM2BA6NNL0 878 aaPredicted RBP3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 NUTM2EB1AL46 878 aaPredicted RBP3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 NUTM2DQ5VT03 806 aaPredicted RBP3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 NUTM2AQ8IVF1 878 aaPredicted RBP3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 SPSB2Q99619 263 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 USTQ9Y2C2 406 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 ATG7O95352 703 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 ZBBXA8MT70 800 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 ANKLE1Q8NAG6 615 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 TRIM52Q96A61 297 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 STAC3Q96MF2 364 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 MTRQ99707 1265 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 TBC1D2BQ9UPU7 963 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 PER1O15534 1290 aaPredicted RBP3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 DKK1O94907 266 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 PTK2Q05397 1052 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 CDK15Q96Q40 435 aa3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 ZNF330Q9Y3S2 320 aaPredicted RBP3.35□□□□□ -1.87
AC025539.1-201ENST00000515343 GOLGA8CPA6NN73 597 aa3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 C6orf229H3BNL8 230 aa3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 M0R2N6 131 aa3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 WNT7BP56706 349 aa3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 SEPT12Q8IYM1 358 aa3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 LRRN4Q8WUT4 740 aa3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 PATL2C9JE40 543 aaKnown RBP3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 NBPF14Q5TI25 921 aa3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 ANKRD13DQ6ZTN6 518 aa3.34□□□□□ -1.87
AC025539.1-201ENST00000515343 NR6A1Q15406 480 aa3.34□□□□□ -1.88
AC025539.1-201ENST00000515343 MAP7D1Q3KQU3 841 aa3.34□□□□□ -1.88
AC025539.1-201ENST00000515343 TRAF7Q6Q0C0 670 aa3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 GLMNQ92990 594 aa3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 GDPD2Q9HCC8 539 aa3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 WASLO00401 505 aaPredicted RBP3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 EIF4G2P78344 907 aaKnown RBP eCLIP3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 ATP9BO43861 1147 aa3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 KANK4Q5T7N3 995 aaPredicted RBP3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 POTEAQ6S8J7 498 aa3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 C1orf216Q8TAB5 229 aa3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 UCN2Q96RP3 112 aa3.33□□□□□ -1.88
AC025539.1-201ENST00000515343 EPS8L1Q8TE68 723 aa3.32□□□□□ -1.88
AC025539.1-201ENST00000515343 SLC6A16Q9GZN6 736 aa3.32□□□□□ -1.88
AC025539.1-201ENST00000515343 PBXIP1Q96AQ6 731 aa3.32□□□□□ -1.88
AC025539.1-201ENST00000515343 CCDC82Q8N4S0 544 aa3.32□□□□□ -1.88
AC025539.1-201ENST00000515343 NUDT12Q9BQG2 462 aa3.32□□□□□ -1.88
AC025539.1-201ENST00000515343 PPP1R12CQ9BZL4 782 aa3.32□□□□□ -1.88
AC025539.1-201ENST00000515343 POM121CA8CG34 1229 aa3.31□□□□□ -1.88
AC025539.1-201ENST00000515343 SYMPKQ92797 1274 aaKnown RBP3.31□□□□□ -1.88
AC025539.1-201ENST00000515343 UNC93B1Q9H1C4 597 aa3.31□□□□□ -1.88
AC025539.1-201ENST00000515343 PTCRAQ6ISU1 281 aaPredicted RBP3.31□□□□□ -1.88
AC025539.1-201ENST00000515343 CEP126Q9P2H0 1117 aa3.31□□□□□ -1.88
AC025539.1-201ENST00000515343 SIX5Q8N196 739 aa3.31□□□□□ -1.88
AC025539.1-201ENST00000515343 COL26A1Q96A83 441 aa3.31□□□□□ -1.88
AC025539.1-201ENST00000515343 EMID1Q96A84 441 aaPredicted RBP3.31□□□□□ -1.88
AC025539.1-201ENST00000515343 FBXO45P0C2W1 286 aa3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 VARSP26640 1264 aaKnown RBP3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 MAFBQ9Y5Q3 323 aaPredicted RBP3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 KCNA1Q09470 495 aa3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 PUS10Q3MIT2 529 aaKnown RBP3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 RNF135Q8IUD6 432 aa3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 GNEQ9Y223 722 aaKnown RBP3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 TMEM88BA6NKF7 163 aa3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 FAM196BA6NMK8 535 aa3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 SIAH2O43255 324 aa3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 KCNC4Q03721 635 aa3.3□□□□□ -1.88
AC025539.1-201ENST00000515343 HDGFL1Q5TGJ6 251 aa3.29□□□□□ -1.88
AC025539.1-201ENST00000515343 ZNF511Q8NB15 262 aa3.29□□□□□ -1.88
AC025539.1-201ENST00000515343 RNF20Q5VTR2 975 aa3.29□□□□□ -1.88
AC025539.1-201ENST00000515343 KCTD17Q8N5Z5 321 aa3.29□□□□□ -1.88
AC025539.1-201ENST00000515343 STAG2Q8N3U4 1231 aa3.29□□□□□ -1.88
AC025539.1-201ENST00000515343 KCTD12Q96CX2 325 aaKnown RBP3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 PALM3A6NDB9 673 aaPredicted RBP3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 C4orf48Q5BLP8 95 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 BPHLQ86WA6 291 aaPredicted RBP3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 MAP10Q9P2G4 905 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 HRH3Q9Y5N1 445 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 V9GY48 417 aaPredicted RBP3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 A0A0G2JS52 829 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 ABL2P42684 1182 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 PRR20EP86478 221 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 PRR20CP86479 221 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 PRR20DP86480 221 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 PRR20BP86481 221 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 PRR20AP86496 221 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 SEMA3FQ13275 785 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 CCDC97Q96F63 343 aaPredicted RBP3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 PRDM9Q9NQV7 894 aa3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 ZNF777Q9ULD5 760 aaPredicted RBP3.28□□□□□ -1.88
AC025539.1-201ENST00000515343 WNT7AO00755 349 aa3.28□□□□□ -1.89
AC025539.1-201ENST00000515343 FAM69CQ0P6D2 419 aa3.28□□□□□ -1.89
AC025539.1-201ENST00000515343 CSPP1Q1MSJ5 1256 aa3.28□□□□□ -1.89
AC025539.1-201ENST00000515343 LARGE2Q8N3Y3 721 aa3.28□□□□□ -1.89
AC025539.1-201ENST00000515343 BRD1O95696 1058 aa3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 GGCXP38435 758 aa3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 SH3BP2P78314 561 aa3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 ATP5J2-PTCD1G3V325 749 aa3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 VAC14Q08AM6 782 aa3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 CLP1Q92989 425 aaKnown RBP3.27□□□□□ -1.89
AC025539.1-201ENST00000515343 CALR3Q96L12 384 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms