RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 PLEKHG3A1L390 1219 aa19.43■□□□□ 0.7
APBB3-221ENST00000515056 PPIP5K1Q6PFW1 1433 aa19.42■□□□□ 0.7
APBB3-221ENST00000515056 PHF8Q9UPP1 1060 aa19.42■□□□□ 0.7
APBB3-221ENST00000515056 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
APBB3-221ENST00000515056 PDE3BQ13370 1112 aa19.41■□□□□ 0.7
APBB3-221ENST00000515056 UBAP1LF5GYI3 381 aa19.4■□□□□ 0.7
APBB3-221ENST00000515056 ACEP12821 1306 aa19.39■□□□□ 0.7
APBB3-221ENST00000515056 BRINP3Q76B58 766 aa19.39■□□□□ 0.69
APBB3-221ENST00000515056 NGDNQ8NEJ9 315 aaKnown RBP19.39■□□□□ 0.69
APBB3-221ENST00000515056 PANK3Q9H999 370 aa19.39■□□□□ 0.69
APBB3-221ENST00000515056 NINLQ9Y2I6 1382 aa19.39■□□□□ 0.69
APBB3-221ENST00000515056 FOXO3O43524 673 aa19.38■□□□□ 0.69
APBB3-221ENST00000515056 TERF2IPQ9NYB0 399 aa19.38■□□□□ 0.69
APBB3-221ENST00000515056 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
APBB3-221ENST00000515056 HDGFL2Q7Z4V5 671 aaPredicted RBP19.36■□□□□ 0.69
APBB3-221ENST00000515056 PIP4K2BP78356 416 aa19.36■□□□□ 0.69
APBB3-221ENST00000515056 B4GALNT3Q6L9W6 998 aa19.36■□□□□ 0.69
APBB3-221ENST00000515056 TOPAZ1Q8N9V7 1692 aa19.35■□□□□ 0.69
APBB3-221ENST00000515056 ITSN1Q15811 1721 aa19.35■□□□□ 0.69
APBB3-221ENST00000515056 MYOM1P52179 1685 aa19.35■□□□□ 0.69
APBB3-221ENST00000515056 CD163L1Q9NR16 1453 aa19.34■□□□□ 0.69
APBB3-221ENST00000515056 POLR3AO14802 1390 aaPredicted RBP19.34■□□□□ 0.69
APBB3-221ENST00000515056 PSME1Q06323 249 aa19.34■□□□□ 0.69
APBB3-221ENST00000515056 DDX17Q92841 729 aaKnown RBP19.34■□□□□ 0.69
APBB3-221ENST00000515056 CARD14Q9BXL6 1004 aa19.34■□□□□ 0.69
APBB3-221ENST00000515056 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
APBB3-221ENST00000515056 CPSF1Q10570 1443 aaKnown RBP19.34■□□□□ 0.69
APBB3-221ENST00000515056 ANKRD36BQ8N2N9 1353 aa19.34■□□□□ 0.69
APBB3-221ENST00000515056 A0A1W2PP64 1363 aa19.33■□□□□ 0.69
APBB3-221ENST00000515056 BLMP54132 1417 aaPredicted RBP19.33■□□□□ 0.69
APBB3-221ENST00000515056 XPCQ01831 940 aaPredicted RBP19.31■□□□□ 0.68
APBB3-221ENST00000515056 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
APBB3-221ENST00000515056 KRT28Q7Z3Y7 464 aa19.31■□□□□ 0.68
APBB3-221ENST00000515056 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
APBB3-221ENST00000515056 NPHP3Q7Z494 1330 aa19.3■□□□□ 0.68
APBB3-221ENST00000515056 NPC1L1Q9UHC9 1359 aa19.3■□□□□ 0.68
APBB3-221ENST00000515056 KNSTRNQ9Y448 316 aa19.28■□□□□ 0.68
APBB3-221ENST00000515056 USP6P35125 1406 aa19.28■□□□□ 0.68
APBB3-221ENST00000515056 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
APBB3-221ENST00000515056 ROBO1Q9Y6N7 1651 aa19.27■□□□□ 0.68
APBB3-221ENST00000515056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.27■□□□□ 0.68
APBB3-221ENST00000515056 UBE2Q2Q8WVN8 375 aa19.27■□□□□ 0.68
APBB3-221ENST00000515056 PAK3O75914 559 aaPredicted RBP19.26■□□□□ 0.67
APBB3-221ENST00000515056 TTC21BQ7Z4L5 1316 aa19.26■□□□□ 0.67
APBB3-221ENST00000515056 CCDC136Q96JN2 1154 aa19.26■□□□□ 0.67
APBB3-221ENST00000515056 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
APBB3-221ENST00000515056 SOS2Q07890 1332 aaPredicted RBP19.25■□□□□ 0.67
APBB3-221ENST00000515056 RRP1P56182 461 aaKnown RBP19.25■□□□□ 0.67
APBB3-221ENST00000515056 AMER1Q5JTC6 1135 aaPredicted RBP19.25■□□□□ 0.67
APBB3-221ENST00000515056 RCAN3Q9UKA8 241 aa19.25■□□□□ 0.67
APBB3-221ENST00000515056 SSH2Q76I76 1423 aa19.25■□□□□ 0.67
APBB3-221ENST00000515056 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
APBB3-221ENST00000515056 EDC4Q6P2E9 1401 aaKnown RBP19.24■□□□□ 0.67
APBB3-221ENST00000515056 FYB1O15117 783 aa19.23■□□□□ 0.67
APBB3-221ENST00000515056 CGNL1Q0VF96 1302 aa19.22■□□□□ 0.67
APBB3-221ENST00000515056 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
APBB3-221ENST00000515056 PPP2R1AP30153 589 aa19.21■□□□□ 0.67
APBB3-221ENST00000515056 ABTB2Q8N961 1025 aa19.21■□□□□ 0.67
APBB3-221ENST00000515056 PXDNQ92626 1479 aa19.21■□□□□ 0.67
APBB3-221ENST00000515056 TTC21AQ8NDW8 1320 aa19.21■□□□□ 0.67
APBB3-221ENST00000515056 LMOD2Q6P5Q4 547 aa19.21■□□□□ 0.67
APBB3-221ENST00000515056 NME9Q86XW9 330 aa19.21■□□□□ 0.67
APBB3-221ENST00000515056 GGNBP2Q9H3C7 697 aa19.2■□□□□ 0.66
APBB3-221ENST00000515056 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
APBB3-221ENST00000515056 SBNO1A3KN83 1393 aa19.2■□□□□ 0.66
APBB3-221ENST00000515056 NHSL1Q5SYE7 1610 aa19.19■□□□□ 0.66
APBB3-221ENST00000515056 SPATA31A3Q5VYP0 1347 aa19.19■□□□□ 0.66
APBB3-221ENST00000515056 NBR1Q14596 966 aa19.19■□□□□ 0.66
APBB3-221ENST00000515056 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
APBB3-221ENST00000515056 NUTM2GQ5VZR2 741 aa19.18■□□□□ 0.66
APBB3-221ENST00000515056 SENP3-EIF4A1A0A087X0R7 540 aa19.18■□□□□ 0.66
APBB3-221ENST00000515056 NLRP6P59044 892 aa19.18■□□□□ 0.66
APBB3-221ENST00000515056 AHDC1Q5TGY3 1603 aaPredicted RBP19.17■□□□□ 0.66
APBB3-221ENST00000515056 ADAMTS8Q9UP79 889 aa19.16■□□□□ 0.66
APBB3-221ENST00000515056 TRPM3Q9HCF6 1732 aaPredicted RBP19.16■□□□□ 0.66
APBB3-221ENST00000515056 NRKQ7Z2Y5 1582 aa19.16■□□□□ 0.66
APBB3-221ENST00000515056 RTL5Q5HYW3 569 aaPredicted RBP19.15■□□□□ 0.66
APBB3-221ENST00000515056 HSPA1LP34931 641 aa19.15■□□□□ 0.66
APBB3-221ENST00000515056 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
APBB3-221ENST00000515056 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.66
APBB3-221ENST00000515056 WDR43Q15061 677 aaKnown RBP eCLIP19.14■□□□□ 0.65
APBB3-221ENST00000515056 COG3Q96JB2 828 aa19.14■□□□□ 0.65
APBB3-221ENST00000515056 FBXO41Q8TF61 875 aa19.13■□□□□ 0.65
APBB3-221ENST00000515056 PHLPP1O60346 1717 aa19.13■□□□□ 0.65
APBB3-221ENST00000515056 PLEKHG5O94827 1062 aa19.13■□□□□ 0.65
APBB3-221ENST00000515056 USP31Q70CQ4 1352 aa19.13■□□□□ 0.65
APBB3-221ENST00000515056 MORC1Q86VD1 984 aa19.12■□□□□ 0.65
APBB3-221ENST00000515056 ARHGEF10O15013 1369 aa19.12■□□□□ 0.65
APBB3-221ENST00000515056 NSD2O96028 1365 aa19.12■□□□□ 0.65
APBB3-221ENST00000515056 IPO9Q96P70 1041 aaKnown RBP19.11■□□□□ 0.65
APBB3-221ENST00000515056 PIK3C2AO00443 1686 aa19.11■□□□□ 0.65
APBB3-221ENST00000515056 ALS2Q96Q42 1657 aa19.11■□□□□ 0.65
APBB3-221ENST00000515056 EXOC6Q8TAG9 804 aa19.1■□□□□ 0.65
APBB3-221ENST00000515056 COL16A1Q07092 1604 aaPredicted RBP19.1■□□□□ 0.65
APBB3-221ENST00000515056 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
APBB3-221ENST00000515056 CABLES1Q8TDN4 633 aa19.1■□□□□ 0.65
APBB3-221ENST00000515056 FBLN1P23142 703 aa19.09■□□□□ 0.65
APBB3-221ENST00000515056 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
APBB3-221ENST00000515056 IL27Q8NEV9 243 aa19.09■□□□□ 0.65
APBB3-221ENST00000515056 NGEFQ8N5V2 710 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms