RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
TCOF1-214ENST00000515035 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
TCOF1-214ENST00000515035 SKIDA1Q1XH10 827 aa15.91■□□□□ 0.14
TCOF1-214ENST00000515035 FBXO3Q9UK99 471 aa15.91■□□□□ 0.14
TCOF1-214ENST00000515035 PDCP20941 246 aa15.9■□□□□ 0.14
TCOF1-214ENST00000515035 RALYLQ86SE5 291 aaKnown RBP15.9■□□□□ 0.14
TCOF1-214ENST00000515035 TTC5Q8N0Z6 440 aa15.9■□□□□ 0.14
TCOF1-214ENST00000515035 BRD4O60885 1362 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-214ENST00000515035 CT47B1P0C2W7 299 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-214ENST00000515035 PSMA5P28066 241 aa15.9■□□□□ 0.14
TCOF1-214ENST00000515035 MCM4P33991 863 aa15.9■□□□□ 0.14
TCOF1-214ENST00000515035 MIA2Q96PC5 1412 aa15.89■□□□□ 0.14
TCOF1-214ENST00000515035 ADAMTS8Q9UP79 889 aa15.89■□□□□ 0.13
TCOF1-214ENST00000515035 TROQ12816 1431 aaPredicted RBP15.89■□□□□ 0.13
TCOF1-214ENST00000515035 WASHC2AQ641Q2 1341 aa15.89■□□□□ 0.13
TCOF1-214ENST00000515035 ERICH2A1L162 156 aa15.89■□□□□ 0.13
TCOF1-214ENST00000515035 CCDC192P0DO97 292 aa15.89■□□□□ 0.13
TCOF1-214ENST00000515035 CT47A1Q5JQC4 288 aaPredicted RBP15.89■□□□□ 0.13
TCOF1-214ENST00000515035 LAMC3Q9Y6N6 1575 aa15.88■□□□□ 0.13
TCOF1-214ENST00000515035 TXNDC2Q86VQ3 553 aa15.88■□□□□ 0.13
TCOF1-214ENST00000515035 DHX16O60231 1041 aaKnown RBP15.88■□□□□ 0.13
TCOF1-214ENST00000515035 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
TCOF1-214ENST00000515035 PLCD4Q9BRC7 762 aa15.87■□□□□ 0.13
TCOF1-214ENST00000515035 CWC22Q9HCG8 908 aaKnown RBP15.87■□□□□ 0.13
TCOF1-214ENST00000515035 DDX58O95786 925 aaKnown RBP15.87■□□□□ 0.13
TCOF1-214ENST00000515035 ZSCAN30Q86W11 494 aa15.87■□□□□ 0.13
TCOF1-214ENST00000515035 AMOTL1Q8IY63 956 aa15.87■□□□□ 0.13
TCOF1-214ENST00000515035 SMARCE1Q969G3 411 aa15.87■□□□□ 0.13
TCOF1-214ENST00000515035 KIAA0754O94854 1291 aa15.86■□□□□ 0.13
TCOF1-214ENST00000515035 KIAA0586Q9BVV6 1533 aa15.86■□□□□ 0.13
TCOF1-214ENST00000515035 PRXQ9BXM0 1461 aa15.86■□□□□ 0.13
TCOF1-214ENST00000515035 POGZQ7Z3K3 1410 aa15.86■□□□□ 0.13
TCOF1-214ENST00000515035 AKNAQ7Z591 1439 aa15.86■□□□□ 0.13
TCOF1-214ENST00000515035 FILIP1LQ4L180 1135 aa15.86■□□□□ 0.13
TCOF1-214ENST00000515035 NINLQ9Y2I6 1382 aa15.85■□□□□ 0.13
TCOF1-214ENST00000515035 K7ELQ4 463 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-214ENST00000515035 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
TCOF1-214ENST00000515035 EHBP1L1Q8N3D4 1523 aa15.85■□□□□ 0.13
TCOF1-214ENST00000515035 CNTROBQ8N137 903 aa15.85■□□□□ 0.13
TCOF1-214ENST00000515035 PDCL2Q8N4E4 241 aa15.85■□□□□ 0.13
TCOF1-214ENST00000515035 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-214ENST00000515035 SCAPERQ9BY12 1400 aa15.85■□□□□ 0.13
TCOF1-214ENST00000515035 TCEAL9Q9UHQ7 104 aa15.85■□□□□ 0.13
TCOF1-214ENST00000515035 MYO6Q9UM54 1294 aa15.85■□□□□ 0.13
TCOF1-214ENST00000515035 RAD21O60216 631 aa15.84■□□□□ 0.13
TCOF1-214ENST00000515035 DHX8Q14562 1220 aaKnown RBP15.84■□□□□ 0.13
TCOF1-214ENST00000515035 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
TCOF1-214ENST00000515035 ERICH4A6NGS2 130 aa15.84■□□□□ 0.13
TCOF1-214ENST00000515035 TAF3Q5VWG9 929 aa15.84■□□□□ 0.13
TCOF1-214ENST00000515035 ERLIN1O75477 346 aa15.84■□□□□ 0.13
TCOF1-214ENST00000515035 EIF3JO75822 258 aaKnown RBP15.84■□□□□ 0.13
TCOF1-214ENST00000515035 TSPYL4Q9UJ04 414 aa15.84■□□□□ 0.13
TCOF1-214ENST00000515035 RAPGEF4Q8WZA2 1011 aa15.83■□□□□ 0.13
TCOF1-214ENST00000515035 UBTFL1P0CB47 393 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-214ENST00000515035 SLC52A1Q9NWF4 448 aa15.83■□□□□ 0.12
TCOF1-214ENST00000515035 HFM1A2PYH4 1435 aa15.83■□□□□ 0.12
TCOF1-214ENST00000515035 C9orf84Q5VXU9 1444 aa15.83■□□□□ 0.12
TCOF1-214ENST00000515035 USP8P40818 1118 aa15.83■□□□□ 0.12
TCOF1-214ENST00000515035 NOL10Q9BSC4 688 aaKnown RBP15.83■□□□□ 0.12
TCOF1-214ENST00000515035 CIZ1Q9ULV3 898 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-214ENST00000515035 BRPF1P55201 1214 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-214ENST00000515035 ODF2Q5BJF6 829 aa15.83■□□□□ 0.12
TCOF1-214ENST00000515035 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-214ENST00000515035 TNMDQ9H2S6 317 aa15.83■□□□□ 0.12
TCOF1-214ENST00000515035 WDR33Q9C0J8 1336 aaKnown RBP15.83■□□□□ 0.12
TCOF1-214ENST00000515035 GPRASP1Q5JY77 1395 aa15.83■□□□□ 0.12
TCOF1-214ENST00000515035 HSP90AB2PQ58FF8 381 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 SERPINC1P01008 464 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 EPS15P42566 896 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 FSD1Q9BTV5 496 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 WASHC4Q2M389 1173 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 DEF6Q9H4E7 631 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 CEBPZQ03701 1054 aaKnown RBP15.82■□□□□ 0.12
TCOF1-214ENST00000515035 STK38Q15208 465 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 GCC1Q96CN9 775 aa15.82■□□□□ 0.12
TCOF1-214ENST00000515035 TCP11L2Q8N4U5 519 aa15.81■□□□□ 0.12
TCOF1-214ENST00000515035 CLASRPQ8N2M8 674 aaKnown RBP15.81■□□□□ 0.12
TCOF1-214ENST00000515035 NEUROD6Q96NK8 337 aa15.81■□□□□ 0.12
TCOF1-214ENST00000515035 MSH5O43196 834 aa15.81■□□□□ 0.12
TCOF1-214ENST00000515035 HMOX1P09601 288 aa15.81■□□□□ 0.12
TCOF1-214ENST00000515035 ZNF396Q96N95 335 aaPredicted RBP15.81■□□□□ 0.12
TCOF1-214ENST00000515035 BRMS1Q9HCU9 246 aa15.81■□□□□ 0.12
TCOF1-214ENST00000515035 TMEM132EQ6IEE7 984 aa15.81■□□□□ 0.12
TCOF1-214ENST00000515035 ATP2B1P20020 1258 aa15.81■□□□□ 0.12
TCOF1-214ENST00000515035 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
TCOF1-214ENST00000515035 XBP1P17861 261 aa15.8■□□□□ 0.12
TCOF1-214ENST00000515035 FAM177A1Q8N128 213 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-214ENST00000515035 GOLGA6L10A6NI86 522 aa15.8■□□□□ 0.12
TCOF1-214ENST00000515035 PRDM10Q9NQV6 1147 aa15.8■□□□□ 0.12
TCOF1-214ENST00000515035 SURF6O75683 361 aaKnown RBP15.79■□□□□ 0.12
TCOF1-214ENST00000515035 NLRP6P59044 892 aa15.79■□□□□ 0.12
TCOF1-214ENST00000515035 KRT85P78386 507 aa15.79■□□□□ 0.12
TCOF1-214ENST00000515035 ZFYVE27Q5T4F4 411 aa15.79■□□□□ 0.12
TCOF1-214ENST00000515035 GNAI3P08754 354 aa15.79■□□□□ 0.12
TCOF1-214ENST00000515035 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-214ENST00000515035 GOLGA6L7A0A1B0GV03 622 aa15.79■□□□□ 0.12
TCOF1-214ENST00000515035 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
TCOF1-214ENST00000515035 BCAR3O75815 825 aa15.78■□□□□ 0.12
TCOF1-214ENST00000515035 RAPGEF3O95398 923 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms