RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 PLEKHG3A1L390 1219 aa25.34■■□□□ 1.65
SIL1-215ENST00000515008 RALGAPBQ86X10 1494 aa25.34■■□□□ 1.65
SIL1-215ENST00000515008 ATAD2Q6PL18 1390 aa25.33■■□□□ 1.65
SIL1-215ENST00000515008 GLI3P10071 1580 aa25.32■■□□□ 1.64
SIL1-215ENST00000515008 PAK3O75914 559 aaPredicted RBP25.32■■□□□ 1.64
SIL1-215ENST00000515008 ACEP12821 1306 aa25.32■■□□□ 1.64
SIL1-215ENST00000515008 COL14A1Q05707 1796 aaKnown RBP25.31■■□□□ 1.64
SIL1-215ENST00000515008 PLEKHG5O94827 1062 aa25.31■■□□□ 1.64
SIL1-215ENST00000515008 SRPK2P78362 688 aaKnown RBP25.31■■□□□ 1.64
SIL1-215ENST00000515008 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
SIL1-215ENST00000515008 VPS72Q15906 364 aa25.29■■□□□ 1.64
SIL1-215ENST00000515008 NBPF8Q3BBV2 869 aa25.29■■□□□ 1.64
SIL1-215ENST00000515008 NRAPQ86VF7 1730 aa25.29■■□□□ 1.64
SIL1-215ENST00000515008 PHRF1Q9P1Y6 1649 aaKnown RBP25.27■■□□□ 1.64
SIL1-215ENST00000515008 FAM83GA6ND36 823 aa25.27■■□□□ 1.64
SIL1-215ENST00000515008 BRD4O60885 1362 aaPredicted RBP25.27■■□□□ 1.64
SIL1-215ENST00000515008 TONSLQ96HA7 1378 aa25.27■■□□□ 1.64
SIL1-215ENST00000515008 EVC2Q86UK5 1308 aa25.26■■□□□ 1.63
SIL1-215ENST00000515008 CABP2Q9NPB3 220 aa25.25■■□□□ 1.63
SIL1-215ENST00000515008 PRDM11Q9NQV5 511 aa25.21■■□□□ 1.63
SIL1-215ENST00000515008 BTG4Q9NY30 223 aa25.21■■□□□ 1.63
SIL1-215ENST00000515008 SBNO2Q9Y2G9 1366 aa25.2■■□□□ 1.63
SIL1-215ENST00000515008 CCDC9Q9Y3X0 531 aaKnown RBP25.2■■□□□ 1.62
SIL1-215ENST00000515008 USP6P35125 1406 aa25.19■■□□□ 1.62
SIL1-215ENST00000515008 NRKQ7Z2Y5 1582 aa25.18■■□□□ 1.62
SIL1-215ENST00000515008 USP19O94966 1318 aa25.18■■□□□ 1.62
SIL1-215ENST00000515008 ONECUT3O60422 494 aaPredicted RBP25.18■■□□□ 1.62
SIL1-215ENST00000515008 BRWD3Q6RI45 1802 aa25.18■■□□□ 1.62
SIL1-215ENST00000515008 KIAA0232Q92628 1395 aa25.18■■□□□ 1.62
SIL1-215ENST00000515008 ABTB2Q8N961 1025 aa25.17■■□□□ 1.62
SIL1-215ENST00000515008 SEPT12Q8IYM1 358 aa25.16■■□□□ 1.62
SIL1-215ENST00000515008 CARD11Q9BXL7 1154 aa25.16■■□□□ 1.62
SIL1-215ENST00000515008 CABP1Q9NZU7 370 aa25.16■■□□□ 1.62
SIL1-215ENST00000515008 NUTM2GQ5VZR2 741 aa25.15■■□□□ 1.62
SIL1-215ENST00000515008 CCDC125Q86Z20 511 aa25.15■■□□□ 1.62
SIL1-215ENST00000515008 NLRP13Q86W25 1043 aa25.14■■□□□ 1.62
SIL1-215ENST00000515008 EP400Q96L91 3159 aa25.14■■□□□ 1.61
SIL1-215ENST00000515008 CPDO75976 1380 aa25.14■■□□□ 1.61
SIL1-215ENST00000515008 AKAP12Q02952 1782 aa25.13■■□□□ 1.61
SIL1-215ENST00000515008 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
SIL1-215ENST00000515008 SPATA31A5Q5VU36 1347 aa25.12■■□□□ 1.61
SIL1-215ENST00000515008 SPATA31A7Q8IWB4 1347 aa25.12■■□□□ 1.61
SIL1-215ENST00000515008 ZC3H6P61129 1189 aaKnown RBP25.1■■□□□ 1.61
SIL1-215ENST00000515008 SLIT3O75094 1523 aa25.09■■□□□ 1.61
SIL1-215ENST00000515008 ZNF692Q9BU19 519 aaPredicted RBP25.09■■□□□ 1.61
SIL1-215ENST00000515008 LMO7Q8WWI1 1683 aa25.09■■□□□ 1.61
SIL1-215ENST00000515008 PIK3C2AO00443 1686 aa25.08■■□□□ 1.61
SIL1-215ENST00000515008 CHRNA2Q15822 529 aa25.08■■□□□ 1.61
SIL1-215ENST00000515008 KRT27Q7Z3Y8 459 aa25.08■■□□□ 1.61
SIL1-215ENST00000515008 BLMP54132 1417 aaPredicted RBP25.08■■□□□ 1.61
SIL1-215ENST00000515008 THSD7AQ9UPZ6 1657 aa25.07■■□□□ 1.6
SIL1-215ENST00000515008 FAM98CQ17RN3 349 aaKnown RBP25.07■■□□□ 1.6
SIL1-215ENST00000515008 CPSF1Q10570 1443 aaKnown RBP25.06■■□□□ 1.6
SIL1-215ENST00000515008 A0A0G2JS52 829 aa25.06■■□□□ 1.6
SIL1-215ENST00000515008 GCP02774 474 aa25.06■■□□□ 1.6
SIL1-215ENST00000515008 MYT1Q01538 1121 aa25.06■■□□□ 1.6
SIL1-215ENST00000515008 SPATA31A1Q5TZJ5 1347 aa25.05■■□□□ 1.6
SIL1-215ENST00000515008 MON2Q7Z3U7 1717 aa25.04■■□□□ 1.6
SIL1-215ENST00000515008 NLRP6P59044 892 aa25.04■■□□□ 1.6
SIL1-215ENST00000515008 TTC21AQ8NDW8 1320 aa25.04■■□□□ 1.6
SIL1-215ENST00000515008 CAMTA1Q9Y6Y1 1673 aa25.04■■□□□ 1.6
SIL1-215ENST00000515008 TTC21BQ7Z4L5 1316 aa25.03■■□□□ 1.6
SIL1-215ENST00000515008 STRN4Q9NRL3 753 aa25.02■■□□□ 1.6
SIL1-215ENST00000515008 PUS7Q96PZ0 661 aaKnown RBP25.01■■□□□ 1.59
SIL1-215ENST00000515008 KTN1Q86UP2 1357 aaKnown RBP25.01■■□□□ 1.59
SIL1-215ENST00000515008 EVA1CP58658 441 aa25■■□□□ 1.59
SIL1-215ENST00000515008 COL5A2P05997 1499 aaPredicted RBP24.99■■□□□ 1.59
SIL1-215ENST00000515008 AATKQ6ZMQ8 1374 aa24.99■■□□□ 1.59
SIL1-215ENST00000515008 SLC24A1O60721 1099 aa24.98■■□□□ 1.59
SIL1-215ENST00000515008 SF3B2Q13435 895 aaKnown RBP24.98■■□□□ 1.59
SIL1-215ENST00000515008 CLSPNQ9HAW4 1339 aa24.97■■□□□ 1.59
SIL1-215ENST00000515008 BARGINQ6ZT62 677 aa24.96■■□□□ 1.59
SIL1-215ENST00000515008 KCNH5Q8NCM2 988 aa24.96■■□□□ 1.59
SIL1-215ENST00000515008 USP54Q70EL1 1684 aa24.96■■□□□ 1.59
SIL1-215ENST00000515008 CD163L1Q9NR16 1453 aa24.96■■□□□ 1.59
SIL1-215ENST00000515008 NINLQ9Y2I6 1382 aa24.94■■□□□ 1.58
SIL1-215ENST00000515008 LARP1Q6PKG0 1096 aaKnown RBP24.94■■□□□ 1.58
SIL1-215ENST00000515008 THRAP3Q9Y2W1 955 aaKnown RBP24.94■■□□□ 1.58
SIL1-215ENST00000515008 COL18A1P39060 1754 aa24.94■■□□□ 1.58
SIL1-215ENST00000515008 RGPD1P0DJD0 1748 aa24.93■■□□□ 1.58
SIL1-215ENST00000515008 HDGFL2Q7Z4V5 671 aaPredicted RBP24.93■■□□□ 1.58
SIL1-215ENST00000515008 TCP11L2Q8N4U5 519 aa24.93■■□□□ 1.58
SIL1-215ENST00000515008 TESK2Q96S53 571 aa24.93■■□□□ 1.58
SIL1-215ENST00000515008 TIMELESSQ9UNS1 1208 aa24.93■■□□□ 1.58
SIL1-215ENST00000515008 NFAT5O94916 1531 aa24.92■■□□□ 1.58
SIL1-215ENST00000515008 ABCC6O95255 1503 aa24.92■■□□□ 1.58
SIL1-215ENST00000515008 CRB1P82279 1406 aa24.92■■□□□ 1.58
SIL1-215ENST00000515008 EDC4Q6P2E9 1401 aaKnown RBP24.92■■□□□ 1.58
SIL1-215ENST00000515008 USP31Q70CQ4 1352 aa24.92■■□□□ 1.58
SIL1-215ENST00000515008 ST20-MTHFSA0A0A6YYL1 179 aa24.91■■□□□ 1.58
SIL1-215ENST00000515008 TMC1Q8TDI8 760 aa24.91■■□□□ 1.58
SIL1-215ENST00000515008 USP35Q9P2H5 1018 aa24.91■■□□□ 1.58
SIL1-215ENST00000515008 ARHGEF25Q86VW2 580 aa24.9■■□□□ 1.58
SIL1-215ENST00000515008 TERF2IPQ9NYB0 399 aa24.9■■□□□ 1.58
SIL1-215ENST00000515008 ZRANB1Q9UGI0 708 aa24.9■■□□□ 1.58
SIL1-215ENST00000515008 ZBTB7CA1YPR0 619 aa24.89■■□□□ 1.58
SIL1-215ENST00000515008 PARP4Q9UKK3 1724 aaKnown RBP24.89■■□□□ 1.57
SIL1-215ENST00000515008 SLC12A5Q9H2X9 1139 aa24.88■■□□□ 1.57
SIL1-215ENST00000515008 A0A1W2PP64 1363 aa24.88■■□□□ 1.57
SIL1-215ENST00000515008 USP47Q96K76 1375 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms