RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
COPB2-213ENST00000515006 PRR36Q9H6K5 1346 aa7.98□□□□□ -1.13
COPB2-213ENST00000515006 POLR3AO14802 1390 aaPredicted RBP7.97□□□□□ -1.13
COPB2-213ENST00000515006 INSRP06213 1382 aa7.97□□□□□ -1.13
COPB2-213ENST00000515006 TMEM94Q12767 1356 aa7.97□□□□□ -1.13
COPB2-213ENST00000515006 NUTM2FA1L443 756 aa7.97□□□□□ -1.13
COPB2-213ENST00000515006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.97□□□□□ -1.13
COPB2-213ENST00000515006 FAM9BQ8IZU0 186 aa7.97□□□□□ -1.13
COPB2-213ENST00000515006 NGEFQ8N5V2 710 aa7.97□□□□□ -1.13
COPB2-213ENST00000515006 TTC21BQ7Z4L5 1316 aa7.97□□□□□ -1.13
COPB2-213ENST00000515006 PMFBP1Q8TBY8 1022 aa7.96□□□□□ -1.14
COPB2-213ENST00000515006 YTHDC1Q96MU7 727 aaKnown RBP7.96□□□□□ -1.14
COPB2-213ENST00000515006 ARXQ96QS3 562 aa7.96□□□□□ -1.14
COPB2-213ENST00000515006 GGNBP2Q9H3C7 697 aa7.96□□□□□ -1.14
COPB2-213ENST00000515006 NWD1Q149M9 1564 aa7.96□□□□□ -1.14
COPB2-213ENST00000515006 CHD2O14647 1828 aaKnown RBP7.95□□□□□ -1.14
COPB2-213ENST00000515006 MYCNP04198 464 aaPredicted RBP7.95□□□□□ -1.14
COPB2-213ENST00000515006 MTHFSP49914 203 aa7.95□□□□□ -1.14
COPB2-213ENST00000515006 USP6P35125 1406 aa7.95□□□□□ -1.14
COPB2-213ENST00000515006 CD163L1Q9NR16 1453 aa7.94□□□□□ -1.14
COPB2-213ENST00000515006 CDC42BPGQ6DT37 1551 aa7.94□□□□□ -1.14
COPB2-213ENST00000515006 ABTB2Q8N961 1025 aa7.94□□□□□ -1.14
COPB2-213ENST00000515006 KCNH5Q8NCM2 988 aa7.94□□□□□ -1.14
COPB2-213ENST00000515006 NPHP3Q7Z494 1330 aa7.94□□□□□ -1.14
COPB2-213ENST00000515006 AATKQ6ZMQ8 1374 aa7.94□□□□□ -1.14
COPB2-213ENST00000515006 USP32Q8NFA0 1604 aa7.93□□□□□ -1.14
COPB2-213ENST00000515006 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.93□□□□□ -1.14
COPB2-213ENST00000515006 PAK3O75914 559 aaPredicted RBP7.93□□□□□ -1.14
COPB2-213ENST00000515006 NEFMP07197 916 aa7.93□□□□□ -1.14
COPB2-213ENST00000515006 TNNT2P45379 298 aaPredicted RBP7.93□□□□□ -1.14
COPB2-213ENST00000515006 NLRP6P59044 892 aa7.93□□□□□ -1.14
COPB2-213ENST00000515006 HNRNPUQ00839 825 aaKnown RBP eCLIP7.93□□□□□ -1.14
COPB2-213ENST00000515006 ERICH6Q7L0X2 663 aa7.93□□□□□ -1.14
COPB2-213ENST00000515006 RBM33Q96EV2 1170 aaKnown RBP7.93□□□□□ -1.14
COPB2-213ENST00000515006 SLAIN2Q9P270 581 aa7.93□□□□□ -1.14
COPB2-213ENST00000515006 FBXO3Q9UK99 471 aa7.93□□□□□ -1.14
COPB2-213ENST00000515006 ZNF335Q9H4Z2 1342 aaPredicted RBP7.93□□□□□ -1.14
COPB2-213ENST00000515006 USP31Q70CQ4 1352 aa7.93□□□□□ -1.14
COPB2-213ENST00000515006 FOXO3O43524 673 aa7.92□□□□□ -1.14
COPB2-213ENST00000515006 DIAPH1O60610 1272 aaKnown RBP7.92□□□□□ -1.14
COPB2-213ENST00000515006 CCDC184Q52MB2 194 aa7.92□□□□□ -1.14
COPB2-213ENST00000515006 KRT28Q7Z3Y7 464 aa7.92□□□□□ -1.14
COPB2-213ENST00000515006 NME9Q86XW9 330 aa7.92□□□□□ -1.14
COPB2-213ENST00000515006 RNF216Q9NWF9 866 aaPredicted RBP7.92□□□□□ -1.14
COPB2-213ENST00000515006 C1orf167Q5SNV9 1468 aa7.92□□□□□ -1.14
COPB2-213ENST00000515006 MYOM1P52179 1685 aa7.92□□□□□ -1.14
COPB2-213ENST00000515006 PDE3BQ13370 1112 aa7.91□□□□□ -1.14
COPB2-213ENST00000515006 ORAI2Q96SN7 254 aa7.91□□□□□ -1.14
COPB2-213ENST00000515006 KIF24Q5T7B8 1368 aa7.91□□□□□ -1.14
COPB2-213ENST00000515006 SSH2Q76I76 1423 aa7.91□□□□□ -1.14
COPB2-213ENST00000515006 LRRC7Q96NW7 1537 aa7.9□□□□□ -1.14
COPB2-213ENST00000515006 TULP1O00294 542 aaPredicted RBP7.9□□□□□ -1.14
COPB2-213ENST00000515006 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.9□□□□□ -1.14
COPB2-213ENST00000515006 POLKQ9UBT6 870 aa7.9□□□□□ -1.14
COPB2-213ENST00000515006 ADAMTS8Q9UP79 889 aa7.9□□□□□ -1.14
COPB2-213ENST00000515006 SBNO1A3KN83 1393 aa7.89□□□□□ -1.15
COPB2-213ENST00000515006 PNPLA6Q8IY17 1366 aa7.89□□□□□ -1.15
COPB2-213ENST00000515006 ZBED9Q6R2W3 1325 aa7.89□□□□□ -1.15
COPB2-213ENST00000515006 PPM1GO15355 546 aaPredicted RBP7.89□□□□□ -1.15
COPB2-213ENST00000515006 TOM1O60784 492 aa7.89□□□□□ -1.15
COPB2-213ENST00000515006 FCHSD2O94868 740 aa7.89□□□□□ -1.15
COPB2-213ENST00000515006 MST1RQ04912 1400 aa7.88□□□□□ -1.15
COPB2-213ENST00000515006 U2AF1L5P0DN76 240 aaPredicted RBP7.88□□□□□ -1.15
COPB2-213ENST00000515006 AMPHP49418 695 aa7.88□□□□□ -1.15
COPB2-213ENST00000515006 U2AF1Q01081 240 aaKnown RBP eCLIP7.88□□□□□ -1.15
COPB2-213ENST00000515006 LMOD2Q6P5Q4 547 aa7.88□□□□□ -1.15
COPB2-213ENST00000515006 RUNDC1Q96C34 613 aa7.88□□□□□ -1.15
COPB2-213ENST00000515006 ITSN1Q15811 1721 aa7.88□□□□□ -1.15
COPB2-213ENST00000515006 FMN2Q9NZ56 1722 aa7.88□□□□□ -1.15
COPB2-213ENST00000515006 STRCQ7RTU9 1775 aa7.87□□□□□ -1.15
COPB2-213ENST00000515006 ARHGEF10O15013 1369 aa7.87□□□□□ -1.15
COPB2-213ENST00000515006 U2SURPO15042 1029 aaKnown RBP7.87□□□□□ -1.15
COPB2-213ENST00000515006 BRINP3Q76B58 766 aa7.87□□□□□ -1.15
COPB2-213ENST00000515006 OVOS2A0A0J9YW53 1432 aa7.86□□□□□ -1.15
COPB2-213ENST00000515006 OVOS2Q6IE36 1432 aa7.86□□□□□ -1.15
COPB2-213ENST00000515006 MAPK8IP3Q9UPT6 1336 aa7.86□□□□□ -1.15
COPB2-213ENST00000515006 GCP02774 474 aa7.86□□□□□ -1.15
COPB2-213ENST00000515006 LRRC59Q96AG4 307 aaKnown RBP7.86□□□□□ -1.15
COPB2-213ENST00000515006 ZRANB1Q9UGI0 708 aa7.86□□□□□ -1.15
COPB2-213ENST00000515006 TOPAZ1Q8N9V7 1692 aa7.86□□□□□ -1.15
COPB2-213ENST00000515006 FLT4P35916 1363 aa7.85□□□□□ -1.15
COPB2-213ENST00000515006 SOS2Q07890 1332 aaPredicted RBP7.85□□□□□ -1.15
COPB2-213ENST00000515006 RRS1Q15050 365 aaKnown RBP7.85□□□□□ -1.15
COPB2-213ENST00000515006 IP6K1Q92551 441 aa7.85□□□□□ -1.15
COPB2-213ENST00000515006 EMILIN1Q9Y6C2 1016 aa7.85□□□□□ -1.15
COPB2-213ENST00000515006 NALCNQ8IZF0 1738 aa7.85□□□□□ -1.15
COPB2-213ENST00000515006 SMG6Q86US8 1419 aaKnown RBP7.85□□□□□ -1.15
COPB2-213ENST00000515006 RTL1A6NKG5 1358 aa7.84□□□□□ -1.15
COPB2-213ENST00000515006 SPATA31A3Q5VYP0 1347 aa7.84□□□□□ -1.15
COPB2-213ENST00000515006 KIF1AQ12756 1690 aa7.84□□□□□ -1.15
COPB2-213ENST00000515006 CDK12Q9NYV4 1490 aaPredicted RBP7.84□□□□□ -1.15
COPB2-213ENST00000515006 IL13P35225 146 aa7.84□□□□□ -1.15
COPB2-213ENST00000515006 CALD1Q05682 793 aaKnown RBP7.84□□□□□ -1.15
COPB2-213ENST00000515006 CCDC27Q2M243 656 aa7.84□□□□□ -1.15
COPB2-213ENST00000515006 USP19O94966 1318 aa7.83□□□□□ -1.16
COPB2-213ENST00000515006 MAP3K19Q56UN5 1328 aa7.83□□□□□ -1.16
COPB2-213ENST00000515006 APAF1O14727 1248 aa7.83□□□□□ -1.16
COPB2-213ENST00000515006 SOX12O15370 315 aa7.83□□□□□ -1.16
COPB2-213ENST00000515006 XPCQ01831 940 aaPredicted RBP7.83□□□□□ -1.16
COPB2-213ENST00000515006 LMOD3Q0VAK6 560 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms