RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 LCE2CQ5TA81 110 aa10.75□□□□□ -0.69
NEDD4-211ENST00000514893 CTHP32929 405 aa10.74□□□□□ -0.69
NEDD4-211ENST00000514893 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
NEDD4-211ENST00000514893 SCARF1Q14162 830 aa10.73□□□□□ -0.69
NEDD4-211ENST00000514893 LYPD8Q6UX82 237 aa10.73□□□□□ -0.69
NEDD4-211ENST00000514893 FAM174AQ8TBP5 190 aa10.73□□□□□ -0.69
NEDD4-211ENST00000514893 ZFP42Q96MM3 310 aa10.73□□□□□ -0.69
NEDD4-211ENST00000514893 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
NEDD4-211ENST00000514893 NNTQ13423 1086 aa10.72□□□□□ -0.69
NEDD4-211ENST00000514893 TLL2Q9Y6L7 1015 aa10.71□□□□□ -0.69
NEDD4-211ENST00000514893 ZC3H15Q8WU90 426 aaKnown RBP10.7□□□□□ -0.7
NEDD4-211ENST00000514893 H3BM21 787 aa10.69□□□□□ -0.7
NEDD4-211ENST00000514893 GMPRP36959 345 aa10.69□□□□□ -0.7
NEDD4-211ENST00000514893 RSBN1LQ6PCB5 846 aaPredicted RBP10.69□□□□□ -0.7
NEDD4-211ENST00000514893 SPTLC1O15269 473 aa10.68□□□□□ -0.7
NEDD4-211ENST00000514893 ADH1CP00326 375 aa10.68□□□□□ -0.7
NEDD4-211ENST00000514893 WDR4P57081 412 aaKnown RBP10.68□□□□□ -0.7
NEDD4-211ENST00000514893 MRPL14Q6P1L8 145 aaKnown RBP10.68□□□□□ -0.7
NEDD4-211ENST00000514893 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
NEDD4-211ENST00000514893 ZSCAN1Q8NBB4 408 aa10.67□□□□□ -0.7
NEDD4-211ENST00000514893 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
NEDD4-211ENST00000514893 PRPF38BQ5VTL8 546 aaKnown RBP10.66□□□□□ -0.7
NEDD4-211ENST00000514893 CDK15Q96Q40 435 aa10.66□□□□□ -0.7
NEDD4-211ENST00000514893 TIMP2P16035 220 aa10.65□□□□□ -0.7
NEDD4-211ENST00000514893 HRCP23327 699 aa10.65□□□□□ -0.7
NEDD4-211ENST00000514893 VEGFBP49765 207 aa10.65□□□□□ -0.7
NEDD4-211ENST00000514893 ARID5BQ14865 1188 aa10.65□□□□□ -0.7
NEDD4-211ENST00000514893 RIC3Q7Z5B4 369 aa10.65□□□□□ -0.7
NEDD4-211ENST00000514893 CFAP99D6REC4 459 aa10.64□□□□□ -0.71
NEDD4-211ENST00000514893 NR5A1Q13285 461 aa10.64□□□□□ -0.71
NEDD4-211ENST00000514893 AGERQ15109 404 aa10.64□□□□□ -0.71
NEDD4-211ENST00000514893 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
NEDD4-211ENST00000514893 BPHLQ86WA6 291 aaPredicted RBP10.63□□□□□ -0.71
NEDD4-211ENST00000514893 KLF16Q9BXK1 252 aaPredicted RBP10.63□□□□□ -0.71
NEDD4-211ENST00000514893 PARP9Q8IXQ6 854 aa10.62□□□□□ -0.71
NEDD4-211ENST00000514893 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
NEDD4-211ENST00000514893 AK7Q96M32 723 aa10.62□□□□□ -0.71
NEDD4-211ENST00000514893 TRIM66O15016 1216 aa10.61□□□□□ -0.71
NEDD4-211ENST00000514893 F12P00748 615 aaPredicted RBP10.61□□□□□ -0.71
NEDD4-211ENST00000514893 ARMC2Q8NEN0 867 aa10.61□□□□□ -0.71
NEDD4-211ENST00000514893 MAP10Q9P2G4 905 aa10.6□□□□□ -0.71
NEDD4-211ENST00000514893 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
NEDD4-211ENST00000514893 NUTM2BA6NNL0 878 aaPredicted RBP10.59□□□□□ -0.71
NEDD4-211ENST00000514893 NUTM2EB1AL46 878 aaPredicted RBP10.59□□□□□ -0.71
NEDD4-211ENST00000514893 UPP2O95045 317 aa10.59□□□□□ -0.71
NEDD4-211ENST00000514893 ZIC2O95409 532 aaPredicted RBP10.59□□□□□ -0.71
NEDD4-211ENST00000514893 NUTM2DQ5VT03 806 aaPredicted RBP10.59□□□□□ -0.71
NEDD4-211ENST00000514893 NUTM2AQ8IVF1 878 aaPredicted RBP10.59□□□□□ -0.71
NEDD4-211ENST00000514893 MAN1A2O60476 641 aa10.58□□□□□ -0.72
NEDD4-211ENST00000514893 GRM5P41594 1212 aa10.57□□□□□ -0.72
NEDD4-211ENST00000514893 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
NEDD4-211ENST00000514893 CABLES1Q8TDN4 633 aa10.57□□□□□ -0.72
NEDD4-211ENST00000514893 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
NEDD4-211ENST00000514893 TSC1Q92574 1164 aa10.56□□□□□ -0.72
NEDD4-211ENST00000514893 ITPKCQ96DU7 683 aa10.56□□□□□ -0.72
NEDD4-211ENST00000514893 TUSC1Q2TAM9 212 aa10.55□□□□□ -0.72
NEDD4-211ENST00000514893 ZFAND3Q9H8U3 227 aa10.55□□□□□ -0.72
NEDD4-211ENST00000514893 PER1O15534 1290 aaPredicted RBP10.54□□□□□ -0.72
NEDD4-211ENST00000514893 C6orf118Q5T5N4 469 aa10.54□□□□□ -0.72
NEDD4-211ENST00000514893 SOBPA7XYQ1 873 aa10.53□□□□□ -0.72
NEDD4-211ENST00000514893 NR3C2P08235 984 aa10.53□□□□□ -0.72
NEDD4-211ENST00000514893 VSIG8P0DPA2 414 aa10.53□□□□□ -0.72
NEDD4-211ENST00000514893 BMP2P12643 396 aa10.53□□□□□ -0.72
NEDD4-211ENST00000514893 C4orf48Q5BLP8 95 aa10.53□□□□□ -0.72
NEDD4-211ENST00000514893 NBPF14Q5TI25 921 aa10.53□□□□□ -0.72
NEDD4-211ENST00000514893 HELBQ8NG08 1087 aaPredicted RBP10.52□□□□□ -0.73
NEDD4-211ENST00000514893 LILRB3O75022 631 aa10.51□□□□□ -0.73
NEDD4-211ENST00000514893 MYSM1Q5VVJ2 828 aa10.51□□□□□ -0.73
NEDD4-211ENST00000514893 VASH1Q7L8A9 365 aaPredicted RBP10.5□□□□□ -0.73
NEDD4-211ENST00000514893 LIMD1Q9UGP4 676 aa10.5□□□□□ -0.73
NEDD4-211ENST00000514893 MAP4K5Q9Y4K4 846 aa10.5□□□□□ -0.73
NEDD4-211ENST00000514893 QPCTQ16769 361 aa10.49□□□□□ -0.73
NEDD4-211ENST00000514893 LINC00528Q8N1L1 170 aa10.49□□□□□ -0.73
NEDD4-211ENST00000514893 MEIOBQ8N635 442 aa10.49□□□□□ -0.73
NEDD4-211ENST00000514893 TSEN34Q9BSV6 310 aaKnown RBP10.49□□□□□ -0.73
NEDD4-211ENST00000514893 C1QTNF2Q9BXJ5 285 aa10.49□□□□□ -0.73
NEDD4-211ENST00000514893 RSPH6AQ9H0K4 717 aa10.49□□□□□ -0.73
NEDD4-211ENST00000514893 EMILIN1Q9Y6C2 1016 aa10.49□□□□□ -0.73
NEDD4-211ENST00000514893 PPFIA3O75145 1194 aa10.48□□□□□ -0.73
NEDD4-211ENST00000514893 PDE4DQ08499 809 aa10.48□□□□□ -0.73
NEDD4-211ENST00000514893 SH3RF1Q7Z6J0 888 aa10.48□□□□□ -0.73
NEDD4-211ENST00000514893 TRMT44Q8IYL2 757 aaKnown RBP10.48□□□□□ -0.73
NEDD4-211ENST00000514893 GPKOWQ92917 476 aaPredicted RBP eCLIP10.48□□□□□ -0.73
NEDD4-211ENST00000514893 SH3BP5LQ7L8J4 393 aa10.46□□□□□ -0.73
NEDD4-211ENST00000514893 SOS2Q07890 1332 aaPredicted RBP10.46□□□□□ -0.73
NEDD4-211ENST00000514893 MAGEB6P1A0A0J9YX57 407 aa10.45□□□□□ -0.74
NEDD4-211ENST00000514893 FSHRP23945 695 aa10.45□□□□□ -0.74
NEDD4-211ENST00000514893 RTL5Q5HYW3 569 aaPredicted RBP10.45□□□□□ -0.74
NEDD4-211ENST00000514893 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.44□□□□□ -0.74
NEDD4-211ENST00000514893 CCDC116Q8IYX3 515 aa10.44□□□□□ -0.74
NEDD4-211ENST00000514893 PGPEP1Q9NXJ5 209 aa10.43□□□□□ -0.74
NEDD4-211ENST00000514893 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
NEDD4-211ENST00000514893 TTLL8A6PVC2 850 aa10.41□□□□□ -0.74
NEDD4-211ENST00000514893 DNMT3LQ9UJW3 386 aa10.41□□□□□ -0.74
NEDD4-211ENST00000514893 PDXDC2PQ6P474 469 aa10.4□□□□□ -0.74
NEDD4-211ENST00000514893 CARD14Q9BXL6 1004 aa10.4□□□□□ -0.74
NEDD4-211ENST00000514893 POLR3EQ9NVU0 708 aa10.4□□□□□ -0.74
NEDD4-211ENST00000514893 CDV3Q9UKY7 258 aaKnown RBP10.4□□□□□ -0.74
NEDD4-211ENST00000514893 ERFEQ4G0M1 354 aa10.38□□□□□ -0.75
NEDD4-211ENST00000514893 PPP1R26Q5T8A7 1209 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms