RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ST20-MTHFSA0A0A6YYL1 179 aa9.96□□□□□ -0.82
SMAD1-213ENST00000514778 SAFB2Q14151 953 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMAD1-213ENST00000514778 LHX8Q68G74 356 aa9.96□□□□□ -0.82
SMAD1-213ENST00000514778 FBXO3Q9UK99 471 aa9.96□□□□□ -0.82
SMAD1-213ENST00000514778 TULP4Q9NRJ4 1543 aa9.96□□□□□ -0.82
SMAD1-213ENST00000514778 QRICH2Q9H0J4 1663 aa9.96□□□□□ -0.82
SMAD1-213ENST00000514778 FMN2Q9NZ56 1722 aa9.96□□□□□ -0.82
SMAD1-213ENST00000514778 CDCA8Q53HL2 280 aa9.95□□□□□ -0.82
SMAD1-213ENST00000514778 BRINP3Q76B58 766 aa9.95□□□□□ -0.82
SMAD1-213ENST00000514778 TESK2Q96S53 571 aa9.95□□□□□ -0.82
SMAD1-213ENST00000514778 CDK19Q9BWU1 502 aa9.95□□□□□ -0.82
SMAD1-213ENST00000514778 CCDC61Q9Y6R9 512 aa9.95□□□□□ -0.82
SMAD1-213ENST00000514778 HIRIP3Q9BW71 556 aaPredicted RBP9.94□□□□□ -0.82
SMAD1-213ENST00000514778 ATAD2Q6PL18 1390 aa9.93□□□□□ -0.82
SMAD1-213ENST00000514778 PLEKHG3A1L390 1219 aa9.93□□□□□ -0.82
SMAD1-213ENST00000514778 PIP4K2BP78356 416 aa9.93□□□□□ -0.82
SMAD1-213ENST00000514778 SRPK2P78362 688 aaKnown RBP9.93□□□□□ -0.82
SMAD1-213ENST00000514778 TMF1P82094 1093 aa9.93□□□□□ -0.82
SMAD1-213ENST00000514778 ESCO1Q5FWF5 840 aa9.93□□□□□ -0.82
SMAD1-213ENST00000514778 NUDT16Q96DE0 195 aaKnown RBP9.93□□□□□ -0.82
SMAD1-213ENST00000514778 KIF1AQ12756 1690 aa9.93□□□□□ -0.82
SMAD1-213ENST00000514778 ROBO1Q9Y6N7 1651 aa9.93□□□□□ -0.82
SMAD1-213ENST00000514778 AHDC1Q5TGY3 1603 aaPredicted RBP9.93□□□□□ -0.82
SMAD1-213ENST00000514778 ATP7BP35670 1465 aa9.92□□□□□ -0.82
SMAD1-213ENST00000514778 BRD4O60885 1362 aaPredicted RBP9.92□□□□□ -0.82
SMAD1-213ENST00000514778 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
SMAD1-213ENST00000514778 NPHP3Q7Z494 1330 aa9.92□□□□□ -0.82
SMAD1-213ENST00000514778 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
SMAD1-213ENST00000514778 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
SMAD1-213ENST00000514778 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
SMAD1-213ENST00000514778 ORAI2Q96SN7 254 aa9.91□□□□□ -0.82
SMAD1-213ENST00000514778 ITSN1Q15811 1721 aa9.9□□□□□ -0.82
SMAD1-213ENST00000514778 POLR3AO14802 1390 aaPredicted RBP9.9□□□□□ -0.82
SMAD1-213ENST00000514778 USP32Q8NFA0 1604 aa9.9□□□□□ -0.82
SMAD1-213ENST00000514778 SOS2Q07890 1332 aaPredicted RBP9.9□□□□□ -0.82
SMAD1-213ENST00000514778 PRR36Q9H6K5 1346 aa9.9□□□□□ -0.82
SMAD1-213ENST00000514778 PSME1Q06323 249 aa9.9□□□□□ -0.82
SMAD1-213ENST00000514778 LRRC59Q96AG4 307 aaKnown RBP9.9□□□□□ -0.82
SMAD1-213ENST00000514778 NHSL1Q5SYE7 1610 aa9.89□□□□□ -0.83
SMAD1-213ENST00000514778 HSPA5P11021 654 aaKnown RBP9.89□□□□□ -0.83
SMAD1-213ENST00000514778 CABP2Q9NPB3 220 aa9.89□□□□□ -0.83
SMAD1-213ENST00000514778 TOPAZ1Q8N9V7 1692 aa9.89□□□□□ -0.83
SMAD1-213ENST00000514778 PPIP5K1Q6PFW1 1433 aa9.89□□□□□ -0.83
SMAD1-213ENST00000514778 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
SMAD1-213ENST00000514778 FOXO3O43524 673 aa9.88□□□□□ -0.83
SMAD1-213ENST00000514778 ILDR1Q86SU0 546 aaPredicted RBP9.88□□□□□ -0.83
SMAD1-213ENST00000514778 KIF12Q96FN5 646 aa9.88□□□□□ -0.83
SMAD1-213ENST00000514778 SBNO1A3KN83 1393 aa9.88□□□□□ -0.83
SMAD1-213ENST00000514778 HSPA1LP34931 641 aa9.87□□□□□ -0.83
SMAD1-213ENST00000514778 NGDNQ8NEJ9 315 aaKnown RBP9.87□□□□□ -0.83
SMAD1-213ENST00000514778 CABP1Q9NZU7 370 aa9.87□□□□□ -0.83
SMAD1-213ENST00000514778 DISP3Q9P2K9 1392 aa9.87□□□□□ -0.83
SMAD1-213ENST00000514778 PXDNQ92626 1479 aa9.86□□□□□ -0.83
SMAD1-213ENST00000514778 NUBP1P53384 320 aa9.86□□□□□ -0.83
SMAD1-213ENST00000514778 KRT28Q7Z3Y7 464 aa9.86□□□□□ -0.83
SMAD1-213ENST00000514778 PMFBP1Q8TBY8 1022 aa9.86□□□□□ -0.83
SMAD1-213ENST00000514778 TERF2IPQ9NYB0 399 aa9.86□□□□□ -0.83
SMAD1-213ENST00000514778 JCADQ9P266 1359 aa9.86□□□□□ -0.83
SMAD1-213ENST00000514778 COL16A1Q07092 1604 aaPredicted RBP9.85□□□□□ -0.83
SMAD1-213ENST00000514778 ACEP12821 1306 aa9.85□□□□□ -0.83
SMAD1-213ENST00000514778 PHLPP1O60346 1717 aa9.85□□□□□ -0.83
SMAD1-213ENST00000514778 CPSF1Q10570 1443 aaKnown RBP9.85□□□□□ -0.83
SMAD1-213ENST00000514778 ASTLQ6HA08 431 aaPredicted RBP9.85□□□□□ -0.83
SMAD1-213ENST00000514778 ARHGEF10O15013 1369 aa9.85□□□□□ -0.83
SMAD1-213ENST00000514778 SPATA31A6Q5VVP1 1343 aa9.84□□□□□ -0.83
SMAD1-213ENST00000514778 SPATA31A3Q5VYP0 1347 aa9.84□□□□□ -0.83
SMAD1-213ENST00000514778 HDGFL2Q7Z4V5 671 aaPredicted RBP9.84□□□□□ -0.83
SMAD1-213ENST00000514778 RGPD8O14715 1765 aaPredicted RBP9.83□□□□□ -0.84
SMAD1-213ENST00000514778 USP6P35125 1406 aa9.83□□□□□ -0.84
SMAD1-213ENST00000514778 TNS3Q68CZ2 1445 aa9.83□□□□□ -0.84
SMAD1-213ENST00000514778 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
SMAD1-213ENST00000514778 ANKRD36BQ8N2N9 1353 aa9.83□□□□□ -0.84
SMAD1-213ENST00000514778 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
SMAD1-213ENST00000514778 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
SMAD1-213ENST00000514778 FAM212AQ96EL1 285 aa9.82□□□□□ -0.84
SMAD1-213ENST00000514778 SLC12A5Q9H2X9 1139 aa9.82□□□□□ -0.84
SMAD1-213ENST00000514778 KTN1Q86UP2 1357 aaKnown RBP9.82□□□□□ -0.84
SMAD1-213ENST00000514778 CD163L1Q9NR16 1453 aa9.82□□□□□ -0.84
SMAD1-213ENST00000514778 SHPRHQ149N8 1683 aa9.81□□□□□ -0.84
SMAD1-213ENST00000514778 PNPLA6Q8IY17 1366 aa9.81□□□□□ -0.84
SMAD1-213ENST00000514778 MAP3K13O43283 966 aa9.81□□□□□ -0.84
SMAD1-213ENST00000514778 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
SMAD1-213ENST00000514778 DDX17Q92841 729 aaKnown RBP9.81□□□□□ -0.84
SMAD1-213ENST00000514778 COL22A1Q8NFW1 1626 aaPredicted RBP9.81□□□□□ -0.84
SMAD1-213ENST00000514778 EDC4Q6P2E9 1401 aaKnown RBP9.81□□□□□ -0.84
SMAD1-213ENST00000514778 TRPM3Q9HCF6 1732 aaPredicted RBP9.8□□□□□ -0.84
SMAD1-213ENST00000514778 SGIP1Q9BQI5 828 aa9.8□□□□□ -0.84
SMAD1-213ENST00000514778 KIF7Q2M1P5 1343 aa9.8□□□□□ -0.84
SMAD1-213ENST00000514778 A0A1W2PP64 1363 aa9.79□□□□□ -0.84
SMAD1-213ENST00000514778 AKAP12Q02952 1782 aa9.79□□□□□ -0.84
SMAD1-213ENST00000514778 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
SMAD1-213ENST00000514778 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
SMAD1-213ENST00000514778 NLRP13Q86W25 1043 aa9.79□□□□□ -0.84
SMAD1-213ENST00000514778 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
SMAD1-213ENST00000514778 MED1Q15648 1581 aaPredicted RBP9.79□□□□□ -0.84
SMAD1-213ENST00000514778 TTC21BQ7Z4L5 1316 aa9.79□□□□□ -0.84
SMAD1-213ENST00000514778 USP31Q70CQ4 1352 aa9.78□□□□□ -0.84
SMAD1-213ENST00000514778 CCDC7Q96M83 1385 aa9.78□□□□□ -0.84
SMAD1-213ENST00000514778 ALS2Q96Q42 1657 aa9.78□□□□□ -0.84
SMAD1-213ENST00000514778 XPCQ01831 940 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms