RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 CCDC158Q5M9N0 1113 aa9.13□□□□□ -0.95
CCDC30-214ENST00000514642 DDX19BQ9UMR2 479 aa9.13□□□□□ -0.95
CCDC30-214ENST00000514642 TCERG1O14776 1098 aaKnown RBP9.13□□□□□ -0.95
CCDC30-214ENST00000514642 IGHMBP2P38935 993 aaKnown RBP9.13□□□□□ -0.95
CCDC30-214ENST00000514642 ANKRD45Q5TZF3 282 aa9.13□□□□□ -0.95
CCDC30-214ENST00000514642 SYAP1Q96A49 352 aaPredicted RBP9.12□□□□□ -0.95
CCDC30-214ENST00000514642 KIF21AQ7Z4S6 1674 aa9.12□□□□□ -0.95
CCDC30-214ENST00000514642 ZKSCAN1P17029 563 aaPredicted RBP9.12□□□□□ -0.95
CCDC30-214ENST00000514642 TPD52L1Q16890 204 aaPredicted RBP9.12□□□□□ -0.95
CCDC30-214ENST00000514642 TMEM132AQ24JP5 1023 aa9.12□□□□□ -0.95
CCDC30-214ENST00000514642 BRMS1Q9HCU9 246 aa9.12□□□□□ -0.95
CCDC30-214ENST00000514642 FBXO31Q5XUX0 539 aaPredicted RBP9.11□□□□□ -0.95
CCDC30-214ENST00000514642 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 ZNF518AQ6AHZ1 1483 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 NINLQ9Y2I6 1382 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 TIAM1Q13009 1591 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 CPLX1O14810 134 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 AMOTQ4VCS5 1084 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 ERC1Q8IUD2 1116 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC30-214ENST00000514642 CCDC61Q9Y6R9 512 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 NPHP3Q7Z494 1330 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 CREBRFQ8IUR6 639 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 ARAP1Q96P48 1450 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 ST5P78524 1137 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 NOC3LQ8WTT2 800 aaKnown RBP9.11□□□□□ -0.95
CCDC30-214ENST00000514642 ANO2Q9NQ90 1003 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 APAF1O14727 1248 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 SULT6B1Q6IMI4 303 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 NCKAP5LQ9HCH0 1330 aa9.11□□□□□ -0.95
CCDC30-214ENST00000514642 SART3Q15020 963 aaKnown RBP9.1□□□□□ -0.95
CCDC30-214ENST00000514642 GBP4Q96PP9 640 aa9.1□□□□□ -0.95
CCDC30-214ENST00000514642 UHRF1BP1LA0JNW5 1464 aa9.1□□□□□ -0.95
CCDC30-214ENST00000514642 RALYLQ86SE5 291 aaKnown RBP9.1□□□□□ -0.95
CCDC30-214ENST00000514642 DHX29Q7Z478 1369 aaKnown RBP9.1□□□□□ -0.95
CCDC30-214ENST00000514642 MYL6BP14649 208 aa9.1□□□□□ -0.95
CCDC30-214ENST00000514642 CCDC57Q2TAC2 916 aa9.1□□□□□ -0.95
CCDC30-214ENST00000514642 ZSCAN29Q8IWY8 852 aaPredicted RBP9.1□□□□□ -0.95
CCDC30-214ENST00000514642 SLC4A3P48751 1232 aa9.1□□□□□ -0.95
CCDC30-214ENST00000514642 PRKAR2BP31323 418 aa9.09□□□□□ -0.95
CCDC30-214ENST00000514642 NOL8Q76FK4 1167 aaKnown RBP9.09□□□□□ -0.95
CCDC30-214ENST00000514642 FOXO3O43524 673 aa9.09□□□□□ -0.95
CCDC30-214ENST00000514642 GNAI3P08754 354 aa9.09□□□□□ -0.95
CCDC30-214ENST00000514642 XBP1P17861 261 aa9.09□□□□□ -0.95
CCDC30-214ENST00000514642 RFC4P35249 363 aa9.09□□□□□ -0.95
CCDC30-214ENST00000514642 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
CCDC30-214ENST00000514642 SPRYD3Q8NCJ5 442 aa9.09□□□□□ -0.95
CCDC30-214ENST00000514642 LRRC59Q96AG4 307 aaKnown RBP9.09□□□□□ -0.95
CCDC30-214ENST00000514642 BCL2L13Q9BXK5 485 aa9.09□□□□□ -0.95
CCDC30-214ENST00000514642 PCF11O94913 1555 aaKnown RBP9.09□□□□□ -0.95
CCDC30-214ENST00000514642 MPHOSPH10O00566 681 aaKnown RBP9.08□□□□□ -0.96
CCDC30-214ENST00000514642 GNAT3A8MTJ3 354 aa9.08□□□□□ -0.96
CCDC30-214ENST00000514642 ZSCAN25Q6NSZ9 544 aa9.08□□□□□ -0.96
CCDC30-214ENST00000514642 DZIP1LQ8IYY4 767 aaKnown RBP9.08□□□□□ -0.96
CCDC30-214ENST00000514642 TEX13AQ9BXU3 409 aaPredicted RBP9.08□□□□□ -0.96
CCDC30-214ENST00000514642 WDR62O43379 1518 aa9.08□□□□□ -0.96
CCDC30-214ENST00000514642 SAFBQ15424 915 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC30-214ENST00000514642 HDGFL1Q5TGJ6 251 aa9.08□□□□□ -0.96
CCDC30-214ENST00000514642 BIVM-ERCC5R4GMW8 1640 aa9.08□□□□□ -0.96
CCDC30-214ENST00000514642 ATP2B2Q01814 1243 aa9.08□□□□□ -0.96
CCDC30-214ENST00000514642 MPRIPQ6WCQ1 1025 aa9.08□□□□□ -0.96
CCDC30-214ENST00000514642 WAPLQ7Z5K2 1190 aa9.08□□□□□ -0.96
CCDC30-214ENST00000514642 ITSN2Q9NZM3 1697 aa9.07□□□□□ -0.96
CCDC30-214ENST00000514642 PHF14O94880 888 aa9.07□□□□□ -0.96
CCDC30-214ENST00000514642 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
CCDC30-214ENST00000514642 HSPA2P54652 639 aa9.07□□□□□ -0.96
CCDC30-214ENST00000514642 PTPN23Q9H3S7 1636 aa9.07□□□□□ -0.96
CCDC30-214ENST00000514642 PLCH2O75038 1416 aa9.07□□□□□ -0.96
CCDC30-214ENST00000514642 WASLO00401 505 aaPredicted RBP9.07□□□□□ -0.96
CCDC30-214ENST00000514642 ANKIB1Q9P2G1 1089 aa9.07□□□□□ -0.96
CCDC30-214ENST00000514642 KDM5BQ9UGL1 1544 aa9.07□□□□□ -0.96
CCDC30-214ENST00000514642 SMARCC1Q92922 1105 aaPredicted RBP9.06□□□□□ -0.96
CCDC30-214ENST00000514642 MTMR7Q9Y216 660 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 HOOK1Q9UJC3 728 aaKnown RBP9.06□□□□□ -0.96
CCDC30-214ENST00000514642 HIP1O00291 1037 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 NACAP1Q9BZK3 213 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 A2MP01023 1474 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 ZNF622Q969S3 477 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC30-214ENST00000514642 STK32BQ9NY57 414 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 RRS1Q15050 365 aaKnown RBP9.06□□□□□ -0.96
CCDC30-214ENST00000514642 ERICH6BQ5W0A0 696 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 MCTP1Q6DN14 999 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 CCDC7Q96M83 1385 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 ADAMTS12P58397 1594 aa9.06□□□□□ -0.96
CCDC30-214ENST00000514642 PES1O00541 588 aaKnown RBP9.05□□□□□ -0.96
CCDC30-214ENST00000514642 SLF2Q8IX21 1173 aa9.05□□□□□ -0.96
CCDC30-214ENST00000514642 CNTROBQ8N137 903 aa9.05□□□□□ -0.96
CCDC30-214ENST00000514642 DNAJC2Q99543 621 aaKnown RBP9.05□□□□□ -0.96
CCDC30-214ENST00000514642 TSR1Q2NL82 804 aaKnown RBP9.05□□□□□ -0.96
CCDC30-214ENST00000514642 CLEC11AQ9Y240 323 aa9.05□□□□□ -0.96
CCDC30-214ENST00000514642 CFAP74Q9C0B2 1584 aa9.05□□□□□ -0.96
CCDC30-214ENST00000514642 REC8O95072 547 aa9.05□□□□□ -0.96
CCDC30-214ENST00000514642 AMER1Q5JTC6 1135 aaPredicted RBP9.05□□□□□ -0.96
CCDC30-214ENST00000514642 CAVIN4Q5BKX8 364 aa9.05□□□□□ -0.96
CCDC30-214ENST00000514642 CLASRPQ8N2M8 674 aaKnown RBP9.04□□□□□ -0.96
CCDC30-214ENST00000514642 FSD1Q9BTV5 496 aa9.04□□□□□ -0.96
CCDC30-214ENST00000514642 ZNF219Q9P2Y4 722 aaPredicted RBP9.04□□□□□ -0.96
CCDC30-214ENST00000514642 ATP6V1DQ9Y5K8 247 aa9.04□□□□□ -0.96
CCDC30-214ENST00000514642 RIMS2Q9UQ26 1411 aa9.04□□□□□ -0.96
CCDC30-214ENST00000514642 SLC12A5Q9H2X9 1139 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms