RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ARHGEF10O15013 1369 aa19.53■□□□□ 0.72
USP46-209ENST00000514536 ZNF692Q9BU19 519 aaPredicted RBP19.52■□□□□ 0.71
USP46-209ENST00000514536 HAP1P54257 671 aaPredicted RBP19.5■□□□□ 0.71
USP46-209ENST00000514536 NUTM2GQ5VZR2 741 aa19.5■□□□□ 0.71
USP46-209ENST00000514536 C8orf37Q96NL8 207 aa19.5■□□□□ 0.71
USP46-209ENST00000514536 CDCA8Q53HL2 280 aa19.49■□□□□ 0.71
USP46-209ENST00000514536 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
USP46-209ENST00000514536 TRPM3Q9HCF6 1732 aaPredicted RBP19.49■□□□□ 0.71
USP46-209ENST00000514536 NGLY1Q96IV0 654 aa19.49■□□□□ 0.71
USP46-209ENST00000514536 USP6P35125 1406 aa19.48■□□□□ 0.71
USP46-209ENST00000514536 COL22A1Q8NFW1 1626 aaPredicted RBP19.48■□□□□ 0.71
USP46-209ENST00000514536 HDGFL2Q7Z4V5 671 aaPredicted RBP19.47■□□□□ 0.71
USP46-209ENST00000514536 KTN1Q86UP2 1357 aaKnown RBP19.46■□□□□ 0.71
USP46-209ENST00000514536 CPSF1Q10570 1443 aaKnown RBP19.46■□□□□ 0.71
USP46-209ENST00000514536 ZNF772Q68DY9 489 aaPredicted RBP19.46■□□□□ 0.71
USP46-209ENST00000514536 TERF2IPQ9NYB0 399 aa19.46■□□□□ 0.71
USP46-209ENST00000514536 BRD4O60885 1362 aaPredicted RBP19.46■□□□□ 0.71
USP46-209ENST00000514536 AFF2P51816 1311 aa19.45■□□□□ 0.7
USP46-209ENST00000514536 TTC21BQ7Z4L5 1316 aa19.44■□□□□ 0.7
USP46-209ENST00000514536 POLR3GLQ9BT43 218 aa19.44■□□□□ 0.7
USP46-209ENST00000514536 ALS2Q96Q42 1657 aa19.44■□□□□ 0.7
USP46-209ENST00000514536 SSH2Q76I76 1423 aa19.43■□□□□ 0.7
USP46-209ENST00000514536 NLRP6P59044 892 aa19.43■□□□□ 0.7
USP46-209ENST00000514536 NLRP13Q86W25 1043 aa19.43■□□□□ 0.7
USP46-209ENST00000514536 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
USP46-209ENST00000514536 CD163L1Q9NR16 1453 aa19.43■□□□□ 0.7
USP46-209ENST00000514536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.42■□□□□ 0.7
USP46-209ENST00000514536 A0A1W2PP64 1363 aa19.4■□□□□ 0.7
USP46-209ENST00000514536 FNBP4Q8N3X1 1017 aaPredicted RBP19.4■□□□□ 0.7
USP46-209ENST00000514536 TTC21AQ8NDW8 1320 aa19.4■□□□□ 0.7
USP46-209ENST00000514536 FAM83GA6ND36 823 aa19.4■□□□□ 0.7
USP46-209ENST00000514536 USP21Q9UK80 565 aa19.4■□□□□ 0.7
USP46-209ENST00000514536 C11orf95C9JLR9 678 aaPredicted RBP19.39■□□□□ 0.69
USP46-209ENST00000514536 USP19O94966 1318 aa19.37■□□□□ 0.69
USP46-209ENST00000514536 RXRBP28702 533 aa19.37■□□□□ 0.69
USP46-209ENST00000514536 ZC3H6P61129 1189 aaKnown RBP19.37■□□□□ 0.69
USP46-209ENST00000514536 NME9Q86XW9 330 aa19.37■□□□□ 0.69
USP46-209ENST00000514536 QTRT2Q9H974 415 aaKnown RBP19.37■□□□□ 0.69
USP46-209ENST00000514536 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
USP46-209ENST00000514536 AKAP12Q02952 1782 aa19.37■□□□□ 0.69
USP46-209ENST00000514536 ANKRD36BQ8N2N9 1353 aa19.37■□□□□ 0.69
USP46-209ENST00000514536 GCP02774 474 aa19.36■□□□□ 0.69
USP46-209ENST00000514536 PRDM11Q9NQV5 511 aa19.36■□□□□ 0.69
USP46-209ENST00000514536 EDC4Q6P2E9 1401 aaKnown RBP19.35■□□□□ 0.69
USP46-209ENST00000514536 CHRNA2Q15822 529 aa19.34■□□□□ 0.69
USP46-209ENST00000514536 KIAA0232Q92628 1395 aa19.34■□□□□ 0.69
USP46-209ENST00000514536 UNC5CLQ8IV45 518 aa19.33■□□□□ 0.69
USP46-209ENST00000514536 BCL9LQ86UU0 1499 aa19.33■□□□□ 0.68
USP46-209ENST00000514536 CARD14Q9BXL6 1004 aa19.32■□□□□ 0.68
USP46-209ENST00000514536 TRPC5Q9UL62 973 aaPredicted RBP19.32■□□□□ 0.68
USP46-209ENST00000514536 MON2Q7Z3U7 1717 aa19.32■□□□□ 0.68
USP46-209ENST00000514536 ABCA3Q99758 1704 aa19.32■□□□□ 0.68
USP46-209ENST00000514536 SOX12O15370 315 aa19.32■□□□□ 0.68
USP46-209ENST00000514536 SLIT2O94813 1529 aa19.31■□□□□ 0.68
USP46-209ENST00000514536 ZBTB7CA1YPR0 619 aa19.31■□□□□ 0.68
USP46-209ENST00000514536 UPF1Q92900 1129 aaKnown RBP eCLIP19.31■□□□□ 0.68
USP46-209ENST00000514536 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
USP46-209ENST00000514536 USP31Q70CQ4 1352 aa19.31■□□□□ 0.68
USP46-209ENST00000514536 NRKQ7Z2Y5 1582 aa19.31■□□□□ 0.68
USP46-209ENST00000514536 PIK3C2AO00443 1686 aa19.31■□□□□ 0.68
USP46-209ENST00000514536 MARF1Q9Y4F3 1742 aaKnown RBP19.3■□□□□ 0.68
USP46-209ENST00000514536 CDK12Q9NYV4 1490 aaPredicted RBP19.3■□□□□ 0.68
USP46-209ENST00000514536 KCNH5Q8NCM2 988 aa19.3■□□□□ 0.68
USP46-209ENST00000514536 CRYBG1Q9Y4K1 1723 aa19.3■□□□□ 0.68
USP46-209ENST00000514536 KIF7Q2M1P5 1343 aa19.3■□□□□ 0.68
USP46-209ENST00000514536 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
USP46-209ENST00000514536 CPDO75976 1380 aa19.28■□□□□ 0.68
USP46-209ENST00000514536 FYB1O15117 783 aa19.27■□□□□ 0.68
USP46-209ENST00000514536 PANK3Q9H999 370 aa19.27■□□□□ 0.68
USP46-209ENST00000514536 PHRF1Q9P1Y6 1649 aaKnown RBP19.27■□□□□ 0.68
USP46-209ENST00000514536 ATRNO75882 1429 aa19.27■□□□□ 0.67
USP46-209ENST00000514536 COG3Q96JB2 828 aa19.27■□□□□ 0.67
USP46-209ENST00000514536 GGNBP2Q9H3C7 697 aa19.27■□□□□ 0.67
USP46-209ENST00000514536 SLIT3O75094 1523 aa19.26■□□□□ 0.67
USP46-209ENST00000514536 GJD4Q96KN9 370 aaPredicted RBP19.26■□□□□ 0.67
USP46-209ENST00000514536 CCDC9Q9Y3X0 531 aaKnown RBP19.26■□□□□ 0.67
USP46-209ENST00000514536 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
USP46-209ENST00000514536 ZEB1P37275 1124 aaPredicted RBP19.25■□□□□ 0.67
USP46-209ENST00000514536 VPS72Q15906 364 aa19.25■□□□□ 0.67
USP46-209ENST00000514536 ARHGEF25Q86VW2 580 aa19.25■□□□□ 0.67
USP46-209ENST00000514536 MYOM1P52179 1685 aa19.25■□□□□ 0.67
USP46-209ENST00000514536 EVA1CP58658 441 aa19.24■□□□□ 0.67
USP46-209ENST00000514536 STRN4Q9NRL3 753 aa19.24■□□□□ 0.67
USP46-209ENST00000514536 RGS12O14924 1447 aa19.24■□□□□ 0.67
USP46-209ENST00000514536 COL14A1Q05707 1796 aaKnown RBP19.24■□□□□ 0.67
USP46-209ENST00000514536 OVOS2A0A0J9YW53 1432 aa19.22■□□□□ 0.67
USP46-209ENST00000514536 OVOS2Q6IE36 1432 aa19.22■□□□□ 0.67
USP46-209ENST00000514536 WASHC2AQ641Q2 1341 aa19.22■□□□□ 0.67
USP46-209ENST00000514536 AATKQ6ZMQ8 1374 aa19.22■□□□□ 0.67
USP46-209ENST00000514536 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
USP46-209ENST00000514536 PLCH1Q4KWH8 1693 aa19.21■□□□□ 0.67
USP46-209ENST00000514536 FBLN1P23142 703 aa19.21■□□□□ 0.67
USP46-209ENST00000514536 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
USP46-209ENST00000514536 CGNL1Q0VF96 1302 aa19.2■□□□□ 0.66
USP46-209ENST00000514536 CAMTA1Q9Y6Y1 1673 aa19.19■□□□□ 0.66
USP46-209ENST00000514536 NWD2Q9ULI1 1742 aa19.19■□□□□ 0.66
USP46-209ENST00000514536 NFAT5O94916 1531 aa19.19■□□□□ 0.66
USP46-209ENST00000514536 LARP1Q6PKG0 1096 aaKnown RBP19.18■□□□□ 0.66
USP46-209ENST00000514536 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.17■□□□□ 0.66
USP46-209ENST00000514536 SPATA31A5Q5VU36 1347 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms