RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 KIF7Q2M1P5 1343 aa23.05■■□□□ 1.28
SNCAIP-220ENST00000514497 WASHC2AQ641Q2 1341 aa23.05■■□□□ 1.28
SNCAIP-220ENST00000514497 MINK1Q8N4C8 1332 aaPredicted RBP23.05■■□□□ 1.28
SNCAIP-220ENST00000514497 TULP4Q9NRJ4 1543 aa23.04■■□□□ 1.28
SNCAIP-220ENST00000514497 C11orf95C9JLR9 678 aaPredicted RBP23.03■■□□□ 1.28
SNCAIP-220ENST00000514497 KRT27Q7Z3Y8 459 aa23.03■■□□□ 1.28
SNCAIP-220ENST00000514497 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
SNCAIP-220ENST00000514497 FOXO3O43524 673 aa23.02■■□□□ 1.28
SNCAIP-220ENST00000514497 CDC42BPGQ6DT37 1551 aa23.01■■□□□ 1.27
SNCAIP-220ENST00000514497 R3HDM1Q15032 1099 aaKnown RBP23■■□□□ 1.27
SNCAIP-220ENST00000514497 CDK19Q9BWU1 502 aa23■■□□□ 1.27
SNCAIP-220ENST00000514497 USP32Q8NFA0 1604 aa23■■□□□ 1.27
SNCAIP-220ENST00000514497 NINLQ9Y2I6 1382 aa23■■□□□ 1.27
SNCAIP-220ENST00000514497 CCDC9Q9Y3X0 531 aaKnown RBP22.99■■□□□ 1.27
SNCAIP-220ENST00000514497 ONECUT3O60422 494 aaPredicted RBP22.97■■□□□ 1.27
SNCAIP-220ENST00000514497 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
SNCAIP-220ENST00000514497 VPS72Q15906 364 aa22.97■■□□□ 1.27
SNCAIP-220ENST00000514497 FMN2Q9NZ56 1722 aa22.96■■□□□ 1.27
SNCAIP-220ENST00000514497 EN1Q05925 392 aaPredicted RBP22.96■■□□□ 1.27
SNCAIP-220ENST00000514497 PLCH1Q4KWH8 1693 aa22.96■■□□□ 1.27
SNCAIP-220ENST00000514497 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
SNCAIP-220ENST00000514497 ITSN1Q15811 1721 aa22.95■■□□□ 1.26
SNCAIP-220ENST00000514497 ANKARQ7Z5J8 1434 aa22.95■■□□□ 1.26
SNCAIP-220ENST00000514497 NWD2Q9ULI1 1742 aa22.95■■□□□ 1.26
SNCAIP-220ENST00000514497 A0A0G2JS52 829 aa22.94■■□□□ 1.26
SNCAIP-220ENST00000514497 MYT1Q01538 1121 aa22.94■■□□□ 1.26
SNCAIP-220ENST00000514497 MYOM1P52179 1685 aa22.93■■□□□ 1.26
SNCAIP-220ENST00000514497 HAP1P54257 671 aaPredicted RBP22.92■■□□□ 1.26
SNCAIP-220ENST00000514497 CABP2Q9NPB3 220 aa22.92■■□□□ 1.26
SNCAIP-220ENST00000514497 SPATA31A3Q5VYP0 1347 aa22.91■■□□□ 1.26
SNCAIP-220ENST00000514497 CCDC61Q9Y6R9 512 aa22.91■■□□□ 1.26
SNCAIP-220ENST00000514497 NUDT16Q96DE0 195 aaKnown RBP22.9■■□□□ 1.26
SNCAIP-220ENST00000514497 ATP7BP35670 1465 aa22.9■■□□□ 1.26
SNCAIP-220ENST00000514497 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
SNCAIP-220ENST00000514497 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.25
SNCAIP-220ENST00000514497 NUTM2FA1L443 756 aa22.88■■□□□ 1.25
SNCAIP-220ENST00000514497 DDX10Q13206 875 aaKnown RBP22.87■■□□□ 1.25
SNCAIP-220ENST00000514497 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
SNCAIP-220ENST00000514497 TNS1Q9HBL0 1735 aaKnown RBP22.85■■□□□ 1.25
SNCAIP-220ENST00000514497 KIF1AQ12756 1690 aa22.85■■□□□ 1.25
SNCAIP-220ENST00000514497 TERF2IPQ9NYB0 399 aa22.85■■□□□ 1.25
SNCAIP-220ENST00000514497 PLEKHG3A1L390 1219 aa22.84■■□□□ 1.25
SNCAIP-220ENST00000514497 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
SNCAIP-220ENST00000514497 FAM98CQ17RN3 349 aaKnown RBP22.84■■□□□ 1.25
SNCAIP-220ENST00000514497 CABLES1Q8TDN4 633 aa22.84■■□□□ 1.25
SNCAIP-220ENST00000514497 PPIP5K1Q6PFW1 1433 aa22.83■■□□□ 1.25
SNCAIP-220ENST00000514497 TMC1Q8TDI8 760 aa22.83■■□□□ 1.25
SNCAIP-220ENST00000514497 ANKRD36BQ8N2N9 1353 aa22.83■■□□□ 1.25
SNCAIP-220ENST00000514497 PRR36Q9H6K5 1346 aa22.82■■□□□ 1.24
SNCAIP-220ENST00000514497 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
SNCAIP-220ENST00000514497 ABCA3Q99758 1704 aa22.82■■□□□ 1.24
SNCAIP-220ENST00000514497 EZH2Q15910 746 aaKnown RBP22.82■■□□□ 1.24
SNCAIP-220ENST00000514497 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
SNCAIP-220ENST00000514497 KRT28Q7Z3Y7 464 aa22.82■■□□□ 1.24
SNCAIP-220ENST00000514497 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
SNCAIP-220ENST00000514497 SLC12A5Q9H2X9 1139 aa22.81■■□□□ 1.24
SNCAIP-220ENST00000514497 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
SNCAIP-220ENST00000514497 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
SNCAIP-220ENST00000514497 DCAF8L1A6NGE4 600 aa22.8■■□□□ 1.24
SNCAIP-220ENST00000514497 HDGFL2Q7Z4V5 671 aaPredicted RBP22.8■■□□□ 1.24
SNCAIP-220ENST00000514497 PANK3Q9H999 370 aa22.8■■□□□ 1.24
SNCAIP-220ENST00000514497 CPSF1Q10570 1443 aaKnown RBP22.79■■□□□ 1.24
SNCAIP-220ENST00000514497 TNS3Q68CZ2 1445 aa22.79■■□□□ 1.24
SNCAIP-220ENST00000514497 NRAPQ86VF7 1730 aa22.79■■□□□ 1.24
SNCAIP-220ENST00000514497 POLR3AO14802 1390 aaPredicted RBP22.77■■□□□ 1.24
SNCAIP-220ENST00000514497 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.24
SNCAIP-220ENST00000514497 CD163L1Q9NR16 1453 aa22.77■■□□□ 1.24
SNCAIP-220ENST00000514497 BRD4O60885 1362 aaPredicted RBP22.76■■□□□ 1.23
SNCAIP-220ENST00000514497 FAM83GA6ND36 823 aa22.76■■□□□ 1.23
SNCAIP-220ENST00000514497 PER1O15534 1290 aaPredicted RBP22.76■■□□□ 1.23
SNCAIP-220ENST00000514497 MON2Q7Z3U7 1717 aa22.76■■□□□ 1.23
SNCAIP-220ENST00000514497 LMOD2Q6P5Q4 547 aa22.75■■□□□ 1.23
SNCAIP-220ENST00000514497 A0A1W2PP64 1363 aa22.75■■□□□ 1.23
SNCAIP-220ENST00000514497 PSME1Q06323 249 aa22.74■■□□□ 1.23
SNCAIP-220ENST00000514497 CAMKK2Q96RR4 588 aa22.74■■□□□ 1.23
SNCAIP-220ENST00000514497 PPP1R1BQ9UD71 204 aaPredicted RBP22.74■■□□□ 1.23
SNCAIP-220ENST00000514497 PHF8Q9UPP1 1060 aa22.74■■□□□ 1.23
SNCAIP-220ENST00000514497 KNSTRNQ9Y448 316 aa22.74■■□□□ 1.23
SNCAIP-220ENST00000514497 ACEP12821 1306 aa22.73■■□□□ 1.23
SNCAIP-220ENST00000514497 NPC1L1Q9UHC9 1359 aa22.73■■□□□ 1.23
SNCAIP-220ENST00000514497 BTG4Q9NY30 223 aa22.72■■□□□ 1.23
SNCAIP-220ENST00000514497 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
SNCAIP-220ENST00000514497 EDC4Q6P2E9 1401 aaKnown RBP22.72■■□□□ 1.23
SNCAIP-220ENST00000514497 IFFO2Q5TF58 517 aa22.71■■□□□ 1.23
SNCAIP-220ENST00000514497 NGDNQ8NEJ9 315 aaKnown RBP22.71■■□□□ 1.23
SNCAIP-220ENST00000514497 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
SNCAIP-220ENST00000514497 ARHGEF10O15013 1369 aa22.7■■□□□ 1.22
SNCAIP-220ENST00000514497 THSD7AQ9UPZ6 1657 aa22.7■■□□□ 1.22
SNCAIP-220ENST00000514497 RREB1Q92766 1687 aa22.69■■□□□ 1.22
SNCAIP-220ENST00000514497 PARD3Q8TEW0 1356 aa22.69■■□□□ 1.22
SNCAIP-220ENST00000514497 TRIM37O94972 964 aa22.69■■□□□ 1.22
SNCAIP-220ENST00000514497 CAMTA1Q9Y6Y1 1673 aa22.68■■□□□ 1.22
SNCAIP-220ENST00000514497 USP6P35125 1406 aa22.68■■□□□ 1.22
SNCAIP-220ENST00000514497 SBNO1A3KN83 1393 aa22.68■■□□□ 1.22
SNCAIP-220ENST00000514497 CGNL1Q0VF96 1302 aa22.68■■□□□ 1.22
SNCAIP-220ENST00000514497 COL14A1Q05707 1796 aaKnown RBP22.68■■□□□ 1.22
SNCAIP-220ENST00000514497 NUP188Q5SRE5 1749 aa22.68■■□□□ 1.22
SNCAIP-220ENST00000514497 NSD3Q9BZ95 1437 aa22.67■■□□□ 1.22
SNCAIP-220ENST00000514497 NSD2O96028 1365 aa22.67■■□□□ 1.22
SNCAIP-220ENST00000514497 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms