RNA–Protein interactions for RNA: ENST00000514494.1

PPARGC1A-213, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 4

Gene PPARGC1A, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-213ENST00000514494 MRGPRX2Q96LB1 330 aa11.65□□□□□ -0.54
PPARGC1A-213ENST00000514494 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.65□□□□□ -0.54
PPARGC1A-213ENST00000514494 SKOR1P84550 965 aa11.64□□□□□ -0.55
PPARGC1A-213ENST00000514494 BAP1Q92560 729 aa11.64□□□□□ -0.55
PPARGC1A-213ENST00000514494 DGAT1O75907 488 aa11.63□□□□□ -0.55
PPARGC1A-213ENST00000514494 EHBP1Q8NDI1 1231 aa11.63□□□□□ -0.55
PPARGC1A-213ENST00000514494 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
PPARGC1A-213ENST00000514494 AP1G2O75843 785 aa11.61□□□□□ -0.55
PPARGC1A-213ENST00000514494 SH3BP2P78314 561 aa11.61□□□□□ -0.55
PPARGC1A-213ENST00000514494 GOPCQ9HD26 462 aa11.61□□□□□ -0.55
PPARGC1A-213ENST00000514494 TOR4AQ9NXH8 423 aa11.61□□□□□ -0.55
PPARGC1A-213ENST00000514494 CTDSPL2Q05D32 466 aa11.6□□□□□ -0.55
PPARGC1A-213ENST00000514494 ZNF511Q8NB15 262 aa11.6□□□□□ -0.55
PPARGC1A-213ENST00000514494 SNIP1Q8TAD8 396 aaKnown RBP11.6□□□□□ -0.55
PPARGC1A-213ENST00000514494 PPP2R2DQ66LE6 453 aa11.59□□□□□ -0.55
PPARGC1A-213ENST00000514494 AGERQ15109 404 aa11.58□□□□□ -0.56
PPARGC1A-213ENST00000514494 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
PPARGC1A-213ENST00000514494 ARMC2Q8NEN0 867 aa11.57□□□□□ -0.56
PPARGC1A-213ENST00000514494 ALDH1A1P00352 501 aa11.55□□□□□ -0.56
PPARGC1A-213ENST00000514494 RFC5P40937 340 aa11.55□□□□□ -0.56
PPARGC1A-213ENST00000514494 LRRN4Q8WUT4 740 aa11.55□□□□□ -0.56
PPARGC1A-213ENST00000514494 J3QL48 77 aa11.54□□□□□ -0.56
PPARGC1A-213ENST00000514494 LCE2BO14633 110 aa11.54□□□□□ -0.56
PPARGC1A-213ENST00000514494 MYT1Q01538 1121 aa11.53□□□□□ -0.56
PPARGC1A-213ENST00000514494 NBPF14Q5TI25 921 aa11.53□□□□□ -0.56
PPARGC1A-213ENST00000514494 SMPD1P17405 629 aa11.52□□□□□ -0.57
PPARGC1A-213ENST00000514494 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.57
PPARGC1A-213ENST00000514494 FOXJ1Q92949 421 aa11.52□□□□□ -0.57
PPARGC1A-213ENST00000514494 USP17L8P0C7I0 530 aa11.51□□□□□ -0.57
PPARGC1A-213ENST00000514494 BPHLQ86WA6 291 aaPredicted RBP11.51□□□□□ -0.57
PPARGC1A-213ENST00000514494 WASF2Q9Y6W5 498 aa11.51□□□□□ -0.57
PPARGC1A-213ENST00000514494 NR6A1Q15406 480 aa11.5□□□□□ -0.57
PPARGC1A-213ENST00000514494 ST8SIA5O15466 376 aa11.49□□□□□ -0.57
PPARGC1A-213ENST00000514494 SIAH2O43255 324 aa11.49□□□□□ -0.57
PPARGC1A-213ENST00000514494 TMEM259Q4ZIN3 620 aa11.49□□□□□ -0.57
PPARGC1A-213ENST00000514494 FAM174AQ8TBP5 190 aa11.49□□□□□ -0.57
PPARGC1A-213ENST00000514494 TLL2Q9Y6L7 1015 aa11.49□□□□□ -0.57
PPARGC1A-213ENST00000514494 AXIN1O15169 862 aa11.48□□□□□ -0.57
PPARGC1A-213ENST00000514494 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
PPARGC1A-213ENST00000514494 ARID5BQ14865 1188 aa11.47□□□□□ -0.57
PPARGC1A-213ENST00000514494 AVPP01185 164 aa11.46□□□□□ -0.57
PPARGC1A-213ENST00000514494 CTC1Q2NKJ3 1217 aa11.46□□□□□ -0.57
PPARGC1A-213ENST00000514494 PNMA1Q8ND90 353 aa11.46□□□□□ -0.57
PPARGC1A-213ENST00000514494 HPS1Q92902 700 aa11.46□□□□□ -0.57
PPARGC1A-213ENST00000514494 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.57
PPARGC1A-213ENST00000514494 AAASQ9NRG9 546 aa11.46□□□□□ -0.57
PPARGC1A-213ENST00000514494 FKBPLQ9UIM3 349 aa11.46□□□□□ -0.57
PPARGC1A-213ENST00000514494 CARD14Q9BXL6 1004 aa11.45□□□□□ -0.58
PPARGC1A-213ENST00000514494 HMX1Q9NP08 348 aaPredicted RBP11.44□□□□□ -0.58
PPARGC1A-213ENST00000514494 C4orf48Q5BLP8 95 aa11.43□□□□□ -0.58
PPARGC1A-213ENST00000514494 ZNF787Q6DD87 383 aa11.42□□□□□ -0.58
PPARGC1A-213ENST00000514494 SH3BP5LQ7L8J4 393 aa11.42□□□□□ -0.58
PPARGC1A-213ENST00000514494 CRIPAKQ8N1N5 446 aa11.42□□□□□ -0.58
PPARGC1A-213ENST00000514494 EPS8L1Q8TE68 723 aa11.42□□□□□ -0.58
PPARGC1A-213ENST00000514494 ARHGAP9Q9BRR9 750 aa11.41□□□□□ -0.58
PPARGC1A-213ENST00000514494 ZC3H4Q9UPT8 1303 aaKnown RBP11.4□□□□□ -0.58
PPARGC1A-213ENST00000514494 SMCPP49901 116 aaPredicted RBP11.4□□□□□ -0.58
PPARGC1A-213ENST00000514494 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
PPARGC1A-213ENST00000514494 SH3RF1Q7Z6J0 888 aa11.4□□□□□ -0.58
PPARGC1A-213ENST00000514494 NNTQ13423 1086 aa11.39□□□□□ -0.59
PPARGC1A-213ENST00000514494 ZBTB33Q86T24 672 aa11.39□□□□□ -0.59
PPARGC1A-213ENST00000514494 MPNDQ8N594 471 aa11.39□□□□□ -0.59
PPARGC1A-213ENST00000514494 ADH1CP00326 375 aa11.38□□□□□ -0.59
PPARGC1A-213ENST00000514494 PTK2Q05397 1052 aa11.38□□□□□ -0.59
PPARGC1A-213ENST00000514494 VASH1Q7L8A9 365 aaPredicted RBP11.37□□□□□ -0.59
PPARGC1A-213ENST00000514494 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
PPARGC1A-213ENST00000514494 BANK1Q8NDB2 785 aa11.36□□□□□ -0.59
PPARGC1A-213ENST00000514494 CDK15Q96Q40 435 aa11.36□□□□□ -0.59
PPARGC1A-213ENST00000514494 C1QTNF2Q9BXJ5 285 aa11.36□□□□□ -0.59
PPARGC1A-213ENST00000514494 CAPN5O15484 640 aaPredicted RBP11.35□□□□□ -0.59
PPARGC1A-213ENST00000514494 ERFEQ4G0M1 354 aa11.35□□□□□ -0.59
PPARGC1A-213ENST00000514494 SLC10A4Q96EP9 437 aa11.35□□□□□ -0.59
PPARGC1A-213ENST00000514494 FSHRP23945 695 aa11.34□□□□□ -0.59
PPARGC1A-213ENST00000514494 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
PPARGC1A-213ENST00000514494 APBB1O00213 710 aa11.33□□□□□ -0.6
PPARGC1A-213ENST00000514494 WDR4P57081 412 aaKnown RBP11.33□□□□□ -0.6
PPARGC1A-213ENST00000514494 NR5A1Q13285 461 aa11.33□□□□□ -0.6
PPARGC1A-213ENST00000514494 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
PPARGC1A-213ENST00000514494 GPSM3Q9Y4H4 160 aa11.33□□□□□ -0.6
PPARGC1A-213ENST00000514494 ADAM32Q8TC27 787 aa11.32□□□□□ -0.6
PPARGC1A-213ENST00000514494 ATP13A2Q9NQ11 1180 aa11.32□□□□□ -0.6
PPARGC1A-213ENST00000514494 MAP4K5Q9Y4K4 846 aa11.32□□□□□ -0.6
PPARGC1A-213ENST00000514494 POTECB2RU33 542 aa11.31□□□□□ -0.6
PPARGC1A-213ENST00000514494 GMPR2Q9P2T1 348 aaKnown RBP11.31□□□□□ -0.6
PPARGC1A-213ENST00000514494 C11orf95C9JLR9 678 aaPredicted RBP11.3□□□□□ -0.6
PPARGC1A-213ENST00000514494 GRM5P41594 1212 aa11.3□□□□□ -0.6
PPARGC1A-213ENST00000514494 GJD4Q96KN9 370 aaPredicted RBP11.3□□□□□ -0.6
PPARGC1A-213ENST00000514494 SNRKQ9NRH2 765 aa11.3□□□□□ -0.6
PPARGC1A-213ENST00000514494 NR3C2P08235 984 aa11.29□□□□□ -0.6
PPARGC1A-213ENST00000514494 MTMR14Q8NCE2 650 aa11.29□□□□□ -0.6
PPARGC1A-213ENST00000514494 CDV3Q9UKY7 258 aaKnown RBP11.29□□□□□ -0.6
PPARGC1A-213ENST00000514494 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
PPARGC1A-213ENST00000514494 ZIC2O95409 532 aaPredicted RBP11.27□□□□□ -0.61
PPARGC1A-213ENST00000514494 BMP1P13497 986 aa11.27□□□□□ -0.61
PPARGC1A-213ENST00000514494 TIMP2P16035 220 aa11.27□□□□□ -0.61
PPARGC1A-213ENST00000514494 CCDC116Q8IYX3 515 aa11.27□□□□□ -0.61
PPARGC1A-213ENST00000514494 OCSTAMPQ9BR26 566 aa11.27□□□□□ -0.61
PPARGC1A-213ENST00000514494 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
PPARGC1A-213ENST00000514494 NDUFB9Q9Y6M9 179 aa11.27□□□□□ -0.61
PPARGC1A-213ENST00000514494 ZBBXA8MT70 800 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms