RNA–Protein interactions for RNA: ENST00000514362.5

SEC31A-239, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-239ENST00000514362 SKOR1P84550 965 aa9.49□□□□□ -0.89
SEC31A-239ENST00000514362 RTL5Q5HYW3 569 aaPredicted RBP9.49□□□□□ -0.89
SEC31A-239ENST00000514362 PLEKHG3A1L390 1219 aa9.48□□□□□ -0.89
SEC31A-239ENST00000514362 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
SEC31A-239ENST00000514362 EHBP1Q8NDI1 1231 aa9.48□□□□□ -0.89
SEC31A-239ENST00000514362 BAP1Q92560 729 aa9.47□□□□□ -0.89
SEC31A-239ENST00000514362 SH3BP2P78314 561 aa9.46□□□□□ -0.9
SEC31A-239ENST00000514362 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
SEC31A-239ENST00000514362 PROCA1Q8NCQ7 364 aaPredicted RBP9.46□□□□□ -0.9
SEC31A-239ENST00000514362 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
SEC31A-239ENST00000514362 IL27Q8NEV9 243 aa9.45□□□□□ -0.9
SEC31A-239ENST00000514362 AAASQ9NRG9 546 aa9.45□□□□□ -0.9
SEC31A-239ENST00000514362 MAP10Q9P2G4 905 aa9.45□□□□□ -0.9
SEC31A-239ENST00000514362 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
SEC31A-239ENST00000514362 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
SEC31A-239ENST00000514362 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
SEC31A-239ENST00000514362 ALDH1A1P00352 501 aa9.42□□□□□ -0.9
SEC31A-239ENST00000514362 BRPF1P55201 1214 aaPredicted RBP9.42□□□□□ -0.9
SEC31A-239ENST00000514362 CRIPAKQ8N1N5 446 aa9.42□□□□□ -0.9
SEC31A-239ENST00000514362 ARMC2Q8NEN0 867 aa9.42□□□□□ -0.9
SEC31A-239ENST00000514362 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.42□□□□□ -0.9
SEC31A-239ENST00000514362 J3QL48 77 aa9.41□□□□□ -0.9
SEC31A-239ENST00000514362 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
SEC31A-239ENST00000514362 SMPD1P17405 629 aa9.41□□□□□ -0.9
SEC31A-239ENST00000514362 CTDSPL2Q05D32 466 aa9.41□□□□□ -0.9
SEC31A-239ENST00000514362 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
SEC31A-239ENST00000514362 AXIN1O15169 862 aa9.4□□□□□ -0.9
SEC31A-239ENST00000514362 AVPP01185 164 aa9.4□□□□□ -0.9
SEC31A-239ENST00000514362 VARSP26640 1264 aaKnown RBP9.4□□□□□ -0.9
SEC31A-239ENST00000514362 AGERQ15109 404 aa9.4□□□□□ -0.9
SEC31A-239ENST00000514362 CTC1Q2NKJ3 1217 aa9.4□□□□□ -0.9
SEC31A-239ENST00000514362 PPP2R2DQ66LE6 453 aa9.4□□□□□ -0.9
SEC31A-239ENST00000514362 WASF2Q9Y6W5 498 aa9.4□□□□□ -0.9
SEC31A-239ENST00000514362 AP1G2O75843 785 aa9.39□□□□□ -0.91
SEC31A-239ENST00000514362 SIAH2O43255 324 aa9.38□□□□□ -0.91
SEC31A-239ENST00000514362 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
SEC31A-239ENST00000514362 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
SEC31A-239ENST00000514362 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
SEC31A-239ENST00000514362 FOXJ1Q92949 421 aa9.36□□□□□ -0.91
SEC31A-239ENST00000514362 SMCPP49901 116 aaPredicted RBP9.35□□□□□ -0.91
SEC31A-239ENST00000514362 LRRN4Q8WUT4 740 aa9.35□□□□□ -0.91
SEC31A-239ENST00000514362 HPS1Q92902 700 aa9.35□□□□□ -0.91
SEC31A-239ENST00000514362 RFC5P40937 340 aa9.34□□□□□ -0.91
SEC31A-239ENST00000514362 FBXO31Q5XUX0 539 aaPredicted RBP9.34□□□□□ -0.91
SEC31A-239ENST00000514362 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
SEC31A-239ENST00000514362 ARID5BQ14865 1188 aa9.33□□□□□ -0.92
SEC31A-239ENST00000514362 MPNDQ8N594 471 aa9.33□□□□□ -0.92
SEC31A-239ENST00000514362 PNMA1Q8ND90 353 aa9.33□□□□□ -0.92
SEC31A-239ENST00000514362 GPKOWQ92917 476 aaPredicted RBP eCLIP9.33□□□□□ -0.92
SEC31A-239ENST00000514362 TMEM259Q4ZIN3 620 aa9.32□□□□□ -0.92
SEC31A-239ENST00000514362 TLL2Q9Y6L7 1015 aa9.32□□□□□ -0.92
SEC31A-239ENST00000514362 WFS1O76024 890 aa9.31□□□□□ -0.92
SEC31A-239ENST00000514362 NR6A1Q15406 480 aa9.31□□□□□ -0.92
SEC31A-239ENST00000514362 FKBPLQ9UIM3 349 aa9.31□□□□□ -0.92
SEC31A-239ENST00000514362 MAGEB6P1A0A0J9YX57 407 aa9.3□□□□□ -0.92
SEC31A-239ENST00000514362 WIPF1O43516 503 aa9.3□□□□□ -0.92
SEC31A-239ENST00000514362 USP17L8P0C7I0 530 aa9.3□□□□□ -0.92
SEC31A-239ENST00000514362 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
SEC31A-239ENST00000514362 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
SEC31A-239ENST00000514362 GMPR2Q9P2T1 348 aaKnown RBP9.29□□□□□ -0.92
SEC31A-239ENST00000514362 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
SEC31A-239ENST00000514362 CAPN5O15484 640 aaPredicted RBP9.28□□□□□ -0.92
SEC31A-239ENST00000514362 ADH1CP00326 375 aa9.28□□□□□ -0.92
SEC31A-239ENST00000514362 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
SEC31A-239ENST00000514362 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
SEC31A-239ENST00000514362 SH3BP5LQ7L8J4 393 aa9.28□□□□□ -0.92
SEC31A-239ENST00000514362 CDK15Q96Q40 435 aa9.28□□□□□ -0.92
SEC31A-239ENST00000514362 CARD14Q9BXL6 1004 aa9.28□□□□□ -0.92
SEC31A-239ENST00000514362 ZC3H4Q9UPT8 1303 aaKnown RBP9.28□□□□□ -0.92
SEC31A-239ENST00000514362 NNTQ13423 1086 aa9.27□□□□□ -0.93
SEC31A-239ENST00000514362 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.93
SEC31A-239ENST00000514362 C11orf95C9JLR9 678 aaPredicted RBP9.26□□□□□ -0.93
SEC31A-239ENST00000514362 PTK2Q05397 1052 aa9.26□□□□□ -0.93
SEC31A-239ENST00000514362 NR5A1Q13285 461 aa9.26□□□□□ -0.93
SEC31A-239ENST00000514362 SH3RF1Q7Z6J0 888 aa9.26□□□□□ -0.93
SEC31A-239ENST00000514362 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
SEC31A-239ENST00000514362 ATP13A2Q9NQ11 1180 aa9.26□□□□□ -0.93
SEC31A-239ENST00000514362 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
SEC31A-239ENST00000514362 C1QTNF2Q9BXJ5 285 aa9.25□□□□□ -0.93
SEC31A-239ENST00000514362 SENP2Q9HC62 589 aa9.25□□□□□ -0.93
SEC31A-239ENST00000514362 HMX1Q9NP08 348 aaPredicted RBP9.24□□□□□ -0.93
SEC31A-239ENST00000514362 WDR4P57081 412 aaKnown RBP9.23□□□□□ -0.93
SEC31A-239ENST00000514362 TRMT44Q8IYL2 757 aaKnown RBP9.23□□□□□ -0.93
SEC31A-239ENST00000514362 EPS8L1Q8TE68 723 aa9.23□□□□□ -0.93
SEC31A-239ENST00000514362 GPSM3Q9Y4H4 160 aa9.23□□□□□ -0.93
SEC31A-239ENST00000514362 INSM1Q01101 510 aaPredicted RBP9.22□□□□□ -0.93
SEC31A-239ENST00000514362 ERFEQ4G0M1 354 aa9.22□□□□□ -0.93
SEC31A-239ENST00000514362 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
SEC31A-239ENST00000514362 GRM5P41594 1212 aa9.21□□□□□ -0.94
SEC31A-239ENST00000514362 LCE2CQ5TA81 110 aa9.21□□□□□ -0.94
SEC31A-239ENST00000514362 KIFC2Q96AC6 838 aa9.21□□□□□ -0.94
SEC31A-239ENST00000514362 SLC10A4Q96EP9 437 aa9.21□□□□□ -0.94
SEC31A-239ENST00000514362 CDV3Q9UKY7 258 aaKnown RBP9.21□□□□□ -0.94
SEC31A-239ENST00000514362 BANK1Q8NDB2 785 aa9.2□□□□□ -0.94
SEC31A-239ENST00000514362 FSHRP23945 695 aa9.19□□□□□ -0.94
SEC31A-239ENST00000514362 APBB1O00213 710 aa9.18□□□□□ -0.94
SEC31A-239ENST00000514362 ZIC2O95409 532 aaPredicted RBP9.18□□□□□ -0.94
SEC31A-239ENST00000514362 BMP1P13497 986 aa9.18□□□□□ -0.94
SEC31A-239ENST00000514362 TIMP2P16035 220 aa9.18□□□□□ -0.94
SEC31A-239ENST00000514362 SCARF1Q14162 830 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms