RNA–Protein interactions for RNA: ENST00000514213.6

USO1-204, Transcript of USO1 vesicle transport factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USO1, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-204ENST00000514213 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
USO1-204ENST00000514213 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
USO1-204ENST00000514213 PTPRTO14522 1441 aa13.82□□□□□ -0.2
USO1-204ENST00000514213 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
USO1-204ENST00000514213 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
USO1-204ENST00000514213 CLCN1P35523 988 aa13.82□□□□□ -0.2
USO1-204ENST00000514213 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
USO1-204ENST00000514213 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
USO1-204ENST00000514213 WAPLQ7Z5K2 1190 aa13.81□□□□□ -0.2
USO1-204ENST00000514213 CLTCL1P53675 1640 aa13.81□□□□□ -0.2
USO1-204ENST00000514213 SYNMO15061 1565 aa13.81□□□□□ -0.2
USO1-204ENST00000514213 CDK19Q9BWU1 502 aa13.8□□□□□ -0.2
USO1-204ENST00000514213 FYB1O15117 783 aa13.8□□□□□ -0.2
USO1-204ENST00000514213 CHD1LQ86WJ1 897 aa13.8□□□□□ -0.2
USO1-204ENST00000514213 DDX49Q9Y6V7 483 aaKnown RBP13.8□□□□□ -0.2
USO1-204ENST00000514213 MADDQ8WXG6 1647 aa13.8□□□□□ -0.2
USO1-204ENST00000514213 GOLGA6L22H0YM25 854 aa13.8□□□□□ -0.2
USO1-204ENST00000514213 TRIM35Q9UPQ4 493 aa13.8□□□□□ -0.2
USO1-204ENST00000514213 KDM5AP29375 1690 aaKnown RBP13.79□□□□□ -0.2
USO1-204ENST00000514213 KIF16BQ96L93 1317 aa13.79□□□□□ -0.2
USO1-204ENST00000514213 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
USO1-204ENST00000514213 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
USO1-204ENST00000514213 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
USO1-204ENST00000514213 GBP4Q96PP9 640 aa13.79□□□□□ -0.2
USO1-204ENST00000514213 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
USO1-204ENST00000514213 TSPYL6Q8N831 410 aa13.78□□□□□ -0.2
USO1-204ENST00000514213 FAM83GA6ND36 823 aa13.78□□□□□ -0.2
USO1-204ENST00000514213 AAMPQ13685 434 aa13.78□□□□□ -0.2
USO1-204ENST00000514213 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
USO1-204ENST00000514213 TRPM2O94759 1503 aa13.77□□□□□ -0.21
USO1-204ENST00000514213 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.21
USO1-204ENST00000514213 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
USO1-204ENST00000514213 ANTXR1Q9H6X2 564 aa13.77□□□□□ -0.21
USO1-204ENST00000514213 XPCQ01831 940 aaPredicted RBP13.76□□□□□ -0.21
USO1-204ENST00000514213 CHD1O14646 1710 aa13.76□□□□□ -0.21
USO1-204ENST00000514213 ABCC1P33527 1531 aa13.76□□□□□ -0.21
USO1-204ENST00000514213 RNF214Q8ND24 703 aa13.76□□□□□ -0.21
USO1-204ENST00000514213 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
USO1-204ENST00000514213 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
USO1-204ENST00000514213 NASPP49321 788 aaPredicted RBP13.75□□□□□ -0.21
USO1-204ENST00000514213 TNPO1Q92973 898 aaKnown RBP13.75□□□□□ -0.21
USO1-204ENST00000514213 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
USO1-204ENST00000514213 ATP7AQ04656 1500 aa13.75□□□□□ -0.21
USO1-204ENST00000514213 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
USO1-204ENST00000514213 CCDC27Q2M243 656 aa13.75□□□□□ -0.21
USO1-204ENST00000514213 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
USO1-204ENST00000514213 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
USO1-204ENST00000514213 ZBTB40Q9NUA8 1239 aa13.74□□□□□ -0.21
USO1-204ENST00000514213 NME9Q86XW9 330 aa13.74□□□□□ -0.21
USO1-204ENST00000514213 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
USO1-204ENST00000514213 RTEL1-TNFRSF6BF6WH68 1400 aa13.73□□□□□ -0.21
USO1-204ENST00000514213 SMARCA5O60264 1052 aaPredicted RBP13.73□□□□□ -0.21
USO1-204ENST00000514213 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
USO1-204ENST00000514213 NCKAP5LQ9HCH0 1330 aa13.73□□□□□ -0.21
USO1-204ENST00000514213 SSFA2P28290 1259 aa13.73□□□□□ -0.21
USO1-204ENST00000514213 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
USO1-204ENST00000514213 KRT24Q2M2I5 525 aa13.73□□□□□ -0.21
USO1-204ENST00000514213 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
USO1-204ENST00000514213 MCTP1Q6DN14 999 aa13.73□□□□□ -0.21
USO1-204ENST00000514213 C16orf71Q8IYS4 520 aaPredicted RBP13.73□□□□□ -0.21
USO1-204ENST00000514213 TBC1D9Q6ZT07 1266 aa13.72□□□□□ -0.21
USO1-204ENST00000514213 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
USO1-204ENST00000514213 SMC5Q8IY18 1101 aa13.72□□□□□ -0.21
USO1-204ENST00000514213 LAMC1P11047 1609 aa13.72□□□□□ -0.21
USO1-204ENST00000514213 PDCL3Q9H2J4 239 aa13.72□□□□□ -0.21
USO1-204ENST00000514213 IGSF3O75054 1194 aa13.71□□□□□ -0.21
USO1-204ENST00000514213 NUCB1Q02818 461 aa13.71□□□□□ -0.21
USO1-204ENST00000514213 ZCCHC11Q5TAX3 1644 aaKnown RBP13.71□□□□□ -0.21
USO1-204ENST00000514213 CAVIN1Q6NZI2 390 aaKnown RBP13.71□□□□□ -0.22
USO1-204ENST00000514213 ASXL2Q76L83 1435 aa13.71□□□□□ -0.22
USO1-204ENST00000514213 ZFYVE16Q7Z3T8 1539 aa13.71□□□□□ -0.22
USO1-204ENST00000514213 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 UQCRHP07919 91 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 GNAI1P63096 354 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 SPHKAPQ2M3C7 1700 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 IQGAP1P46940 1657 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 CD2BP2O95400 341 aaKnown RBP13.7□□□□□ -0.22
USO1-204ENST00000514213 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
USO1-204ENST00000514213 NPATQ14207 1427 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 CALD1Q05682 793 aaKnown RBP13.7□□□□□ -0.22
USO1-204ENST00000514213 C14orf37Q86TY3 774 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 C8orf58Q8NAV2 365 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 COG3Q96JB2 828 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 CHMP4BQ9H444 224 aaKnown RBP13.7□□□□□ -0.22
USO1-204ENST00000514213 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
USO1-204ENST00000514213 FCHSD2O94868 740 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 TPM2P07951 284 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 RPGRIP1LQ68CZ1 1315 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 NFE2L2Q16236 605 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 GAS2L3Q86XJ1 694 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
USO1-204ENST00000514213 ABCA6Q8N139 1617 aa13.68□□□□□ -0.22
USO1-204ENST00000514213 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
USO1-204ENST00000514213 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
USO1-204ENST00000514213 MCM10Q7L590 875 aa13.68□□□□□ -0.22
USO1-204ENST00000514213 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms