RNA–Protein interactions for RNA: ENST00000514033.1

KLF3-203, Transcript of Kruppel like factor 3, humanhuman

TSL 1 (best) BASIC

Gene KLF3, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-203ENST00000514033 TSHZ2Q9NRE2 1034 aa28.78■■■□□ 2.2
KLF3-203ENST00000514033 AKAP12Q02952 1782 aa28.78■■■□□ 2.2
KLF3-203ENST00000514033 U2AF1L5P0DN76 240 aaPredicted RBP28.78■■■□□ 2.2
KLF3-203ENST00000514033 U2AF1Q01081 240 aaKnown RBP eCLIP28.78■■■□□ 2.2
KLF3-203ENST00000514033 ITSN1Q15811 1721 aa28.77■■■□□ 2.2
KLF3-203ENST00000514033 ZNF142P52746 1687 aaPredicted RBP28.77■■■□□ 2.2
KLF3-203ENST00000514033 E9PSI1 815 aa28.76■■■□□ 2.2
KLF3-203ENST00000514033 TCP11L2Q8N4U5 519 aa28.76■■■□□ 2.2
KLF3-203ENST00000514033 ZNF692Q9BU19 519 aaPredicted RBP28.76■■■□□ 2.2
KLF3-203ENST00000514033 PNPLA6Q8IY17 1366 aa28.76■■■□□ 2.19
KLF3-203ENST00000514033 TOPAZ1Q8N9V7 1692 aa28.76■■■□□ 2.19
KLF3-203ENST00000514033 WWC1Q8IX03 1113 aa28.75■■■□□ 2.19
KLF3-203ENST00000514033 XRN1Q8IZH2 1706 aaKnown RBP28.75■■■□□ 2.19
KLF3-203ENST00000514033 SPINK5Q9NQ38 1064 aaPredicted RBP28.74■■■□□ 2.19
KLF3-203ENST00000514033 NME9Q86XW9 330 aa28.73■■■□□ 2.19
KLF3-203ENST00000514033 PIK3R4Q99570 1358 aa28.73■■■□□ 2.19
KLF3-203ENST00000514033 NCBP3Q53F19 620 aaKnown RBP28.72■■■□□ 2.19
KLF3-203ENST00000514033 PLEKHG3A1L390 1219 aa28.71■■■□□ 2.19
KLF3-203ENST00000514033 U2SURPO15042 1029 aaKnown RBP28.71■■■□□ 2.19
KLF3-203ENST00000514033 PHF23Q9BUL5 403 aaPredicted RBP28.71■■■□□ 2.19
KLF3-203ENST00000514033 DMRT2Q9Y5R5 561 aa28.71■■■□□ 2.19
KLF3-203ENST00000514033 NKTRP30414 1462 aaKnown RBP28.71■■■□□ 2.19
KLF3-203ENST00000514033 DIAPH1O60610 1272 aaKnown RBP28.7■■■□□ 2.19
KLF3-203ENST00000514033 RRP7AQ9Y3A4 280 aaKnown RBP28.7■■■□□ 2.19
KLF3-203ENST00000514033 LMTK3Q96Q04 1460 aa28.7■■■□□ 2.18
KLF3-203ENST00000514033 CCDC27Q2M243 656 aa28.7■■■□□ 2.18
KLF3-203ENST00000514033 POLKQ9UBT6 870 aa28.7■■■□□ 2.18
KLF3-203ENST00000514033 NEUROD2Q15784 382 aa28.68■■■□□ 2.18
KLF3-203ENST00000514033 ANKLE2Q86XL3 938 aa28.68■■■□□ 2.18
KLF3-203ENST00000514033 CCDC136Q96JN2 1154 aa28.68■■■□□ 2.18
KLF3-203ENST00000514033 AATKQ6ZMQ8 1374 aa28.67■■■□□ 2.18
KLF3-203ENST00000514033 EXOC6Q8TAG9 804 aa28.67■■■□□ 2.18
KLF3-203ENST00000514033 COG3Q96JB2 828 aa28.67■■■□□ 2.18
KLF3-203ENST00000514033 ZRANB1Q9UGI0 708 aa28.67■■■□□ 2.18
KLF3-203ENST00000514033 ACEP12821 1306 aa28.67■■■□□ 2.18
KLF3-203ENST00000514033 NRKQ7Z2Y5 1582 aa28.66■■■□□ 2.18
KLF3-203ENST00000514033 NUTM2FA1L443 756 aa28.66■■■□□ 2.18
KLF3-203ENST00000514033 PLIN1O60240 522 aa28.66■■■□□ 2.18
KLF3-203ENST00000514033 WDR63Q8IWG1 891 aa28.66■■■□□ 2.18
KLF3-203ENST00000514033 PLEKHF1Q96S99 279 aa28.66■■■□□ 2.18
KLF3-203ENST00000514033 FBLN1P23142 703 aa28.64■■■□□ 2.18
KLF3-203ENST00000514033 KCNA6P17658 529 aa28.63■■■□□ 2.17
KLF3-203ENST00000514033 TTC21BQ7Z4L5 1316 aa28.63■■■□□ 2.17
KLF3-203ENST00000514033 USP6P35125 1406 aa28.62■■■□□ 2.17
KLF3-203ENST00000514033 PPM1GO15355 546 aaPredicted RBP28.61■■■□□ 2.17
KLF3-203ENST00000514033 PNNQ9H307 717 aaKnown RBP28.61■■■□□ 2.17
KLF3-203ENST00000514033 MAP2P11137 1827 aaKnown RBP28.61■■■□□ 2.17
KLF3-203ENST00000514033 CDK12Q9NYV4 1490 aaPredicted RBP28.61■■■□□ 2.17
KLF3-203ENST00000514033 EMILIN1Q9Y6C2 1016 aa28.6■■■□□ 2.17
KLF3-203ENST00000514033 MAPK8IP3Q9UPT6 1336 aa28.59■■■□□ 2.17
KLF3-203ENST00000514033 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.59■■■□□ 2.17
KLF3-203ENST00000514033 HSPA2P54652 639 aa28.57■■■□□ 2.16
KLF3-203ENST00000514033 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
KLF3-203ENST00000514033 FCHSD2O94868 740 aa28.56■■■□□ 2.16
KLF3-203ENST00000514033 TMPOP42166 694 aaKnown RBP28.56■■■□□ 2.16
KLF3-203ENST00000514033 SSH2Q76I76 1423 aa28.56■■■□□ 2.16
KLF3-203ENST00000514033 ANKARQ7Z5J8 1434 aa28.56■■■□□ 2.16
KLF3-203ENST00000514033 CRBNQ96SW2 442 aa28.55■■■□□ 2.16
KLF3-203ENST00000514033 OVOS2A0A0J9YW53 1432 aa28.55■■■□□ 2.16
KLF3-203ENST00000514033 OVOS2Q6IE36 1432 aa28.55■■■□□ 2.16
KLF3-203ENST00000514033 CHD2O14647 1828 aaKnown RBP28.54■■■□□ 2.16
KLF3-203ENST00000514033 LRRC7Q96NW7 1537 aa28.53■■■□□ 2.16
KLF3-203ENST00000514033 C20orf194Q5TEA3 1177 aa28.53■■■□□ 2.16
KLF3-203ENST00000514033 IL13P35225 146 aa28.52■■■□□ 2.16
KLF3-203ENST00000514033 PMFBP1Q8TBY8 1022 aa28.52■■■□□ 2.16
KLF3-203ENST00000514033 FMN2Q9NZ56 1722 aa28.51■■■□□ 2.16
KLF3-203ENST00000514033 RRS1Q15050 365 aaKnown RBP28.51■■■□□ 2.15
KLF3-203ENST00000514033 RSPH6AQ9H0K4 717 aa28.51■■■□□ 2.15
KLF3-203ENST00000514033 TTC21AQ8NDW8 1320 aa28.51■■■□□ 2.15
KLF3-203ENST00000514033 MYH16Q9H6N6 1097 aa28.51■■■□□ 2.15
KLF3-203ENST00000514033 RGPD8O14715 1765 aaPredicted RBP28.5■■■□□ 2.15
KLF3-203ENST00000514033 NPHP4O75161 1426 aaPredicted RBP28.49■■■□□ 2.15
KLF3-203ENST00000514033 NGDNQ8NEJ9 315 aaKnown RBP28.49■■■□□ 2.15
KLF3-203ENST00000514033 TRIM35Q9UPQ4 493 aa28.49■■■□□ 2.15
KLF3-203ENST00000514033 BCAR3O75815 825 aa28.48■■■□□ 2.15
KLF3-203ENST00000514033 NALCNQ8IZF0 1738 aa28.48■■■□□ 2.15
KLF3-203ENST00000514033 PRKAR2BP31323 418 aa28.47■■■□□ 2.15
KLF3-203ENST00000514033 USP31Q70CQ4 1352 aa28.47■■■□□ 2.15
KLF3-203ENST00000514033 NEFMP07197 916 aa28.46■■■□□ 2.15
KLF3-203ENST00000514033 RIPK4P57078 832 aa28.46■■■□□ 2.15
KLF3-203ENST00000514033 IL16Q14005 1332 aa28.44■■■□□ 2.14
KLF3-203ENST00000514033 STRCQ7RTU9 1775 aa28.44■■■□□ 2.14
KLF3-203ENST00000514033 HMOX1P09601 288 aa28.43■■■□□ 2.14
KLF3-203ENST00000514033 RARSP54136 660 aaKnown RBP28.4■■■□□ 2.14
KLF3-203ENST00000514033 RBM19Q9Y4C8 960 aaKnown RBP28.4■■■□□ 2.14
KLF3-203ENST00000514033 FANCIQ9NVI1 1328 aa28.39■■■□□ 2.14
KLF3-203ENST00000514033 NFE2L2Q16236 605 aa28.38■■■□□ 2.13
KLF3-203ENST00000514033 ADGRL3Q9HAR2 1447 aa28.38■■■□□ 2.13
KLF3-203ENST00000514033 PHACTR3Q96KR7 559 aa28.38■■■□□ 2.13
KLF3-203ENST00000514033 PIK3C2AO00443 1686 aa28.37■■■□□ 2.13
KLF3-203ENST00000514033 CT47B1P0C2W7 299 aaPredicted RBP28.36■■■□□ 2.13
KLF3-203ENST00000514033 PEAK1Q9H792 1746 aa28.36■■■□□ 2.13
KLF3-203ENST00000514033 EIF4A2Q14240 407 aaKnown RBP28.36■■■□□ 2.13
KLF3-203ENST00000514033 PDE3AQ14432 1141 aa28.36■■■□□ 2.13
KLF3-203ENST00000514033 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
KLF3-203ENST00000514033 RBM33Q96EV2 1170 aaKnown RBP28.34■■■□□ 2.13
KLF3-203ENST00000514033 CANXP27824 592 aaKnown RBP28.33■■■□□ 2.13
KLF3-203ENST00000514033 NWD1Q149M9 1564 aa28.33■■■□□ 2.13
KLF3-203ENST00000514033 PHF8Q9UPP1 1060 aa28.32■■■□□ 2.12
KLF3-203ENST00000514033 SOX12O15370 315 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms