RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 SPATA31A7Q8IWB4 1347 aa12.18□□□□□ -0.46
CLDND1-229ENST00000513988 PDGFDQ9GZP0 370 aaPredicted RBP12.18□□□□□ -0.46
CLDND1-229ENST00000513988 CCDC144AA2RUR9 1427 aa12.17□□□□□ -0.46
CLDND1-229ENST00000513988 ROBO2Q9HCK4 1378 aa12.17□□□□□ -0.46
CLDND1-229ENST00000513988 GOLGB1Q14789 3259 aaKnown RBP12.16□□□□□ -0.46
CLDND1-229ENST00000513988 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
CLDND1-229ENST00000513988 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
CLDND1-229ENST00000513988 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
CLDND1-229ENST00000513988 ATP10DQ9P241 1426 aa12.15□□□□□ -0.46
CLDND1-229ENST00000513988 KRT28Q7Z3Y7 464 aa12.15□□□□□ -0.46
CLDND1-229ENST00000513988 CROCC2H7BZ55 1655 aa12.15□□□□□ -0.46
CLDND1-229ENST00000513988 ABCA3Q99758 1704 aa12.14□□□□□ -0.47
CLDND1-229ENST00000513988 CDC42BPGQ6DT37 1551 aa12.14□□□□□ -0.47
CLDND1-229ENST00000513988 ABCC5O15440 1437 aa12.14□□□□□ -0.47
CLDND1-229ENST00000513988 TNS3Q68CZ2 1445 aa12.14□□□□□ -0.47
CLDND1-229ENST00000513988 ATXN8OSP0DMR3 200 aa12.14□□□□□ -0.47
CLDND1-229ENST00000513988 APLP1P51693 650 aa12.14□□□□□ -0.47
CLDND1-229ENST00000513988 IQGAP3Q86VI3 1631 aa12.14□□□□□ -0.47
CLDND1-229ENST00000513988 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
CLDND1-229ENST00000513988 PDE3BQ13370 1112 aa12.13□□□□□ -0.47
CLDND1-229ENST00000513988 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
CLDND1-229ENST00000513988 ARXQ96QS3 562 aa12.13□□□□□ -0.47
CLDND1-229ENST00000513988 HFM1A2PYH4 1435 aa12.12□□□□□ -0.47
CLDND1-229ENST00000513988 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
CLDND1-229ENST00000513988 DNAJC5GQ8N7S2 189 aa12.12□□□□□ -0.47
CLDND1-229ENST00000513988 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
CLDND1-229ENST00000513988 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
CLDND1-229ENST00000513988 MTFR1LQ9H019 292 aa12.12□□□□□ -0.47
CLDND1-229ENST00000513988 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
CLDND1-229ENST00000513988 SGIP1Q9BQI5 828 aa12.11□□□□□ -0.47
CLDND1-229ENST00000513988 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
CLDND1-229ENST00000513988 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
CLDND1-229ENST00000513988 ANKRD30AQ9BXX3 1397 aa12.1□□□□□ -0.47
CLDND1-229ENST00000513988 PSME1Q06323 249 aa12.1□□□□□ -0.47
CLDND1-229ENST00000513988 POTEHQ6S545 545 aa12.1□□□□□ -0.47
CLDND1-229ENST00000513988 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
CLDND1-229ENST00000513988 ARHGEF10O15013 1369 aa12.09□□□□□ -0.47
CLDND1-229ENST00000513988 SPATA31A1Q5TZJ5 1347 aa12.09□□□□□ -0.47
CLDND1-229ENST00000513988 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
CLDND1-229ENST00000513988 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
CLDND1-229ENST00000513988 ZNF526Q8TF50 670 aaPredicted RBP12.08□□□□□ -0.48
CLDND1-229ENST00000513988 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
CLDND1-229ENST00000513988 PRAG1Q86YV5 1406 aa12.07□□□□□ -0.48
CLDND1-229ENST00000513988 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
CLDND1-229ENST00000513988 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
CLDND1-229ENST00000513988 CHIC2Q9UKJ5 165 aa12.07□□□□□ -0.48
CLDND1-229ENST00000513988 DAPK1P53355 1430 aa12.06□□□□□ -0.48
CLDND1-229ENST00000513988 NAIPQ13075 1403 aa12.06□□□□□ -0.48
CLDND1-229ENST00000513988 PLSCR1O15162 318 aa12.06□□□□□ -0.48
CLDND1-229ENST00000513988 GRIN3BO60391 1043 aa12.06□□□□□ -0.48
CLDND1-229ENST00000513988 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
CLDND1-229ENST00000513988 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
CLDND1-229ENST00000513988 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
CLDND1-229ENST00000513988 E9PCH4 1651 aa12.05□□□□□ -0.48
CLDND1-229ENST00000513988 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
CLDND1-229ENST00000513988 SLC15A2Q16348 729 aa12.03□□□□□ -0.48
CLDND1-229ENST00000513988 JMYQ8N9B5 988 aa12.03□□□□□ -0.48
CLDND1-229ENST00000513988 USP35Q9P2H5 1018 aa12.03□□□□□ -0.48
CLDND1-229ENST00000513988 TECPR2O15040 1411 aa12.02□□□□□ -0.49
CLDND1-229ENST00000513988 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
CLDND1-229ENST00000513988 PRDM11Q9NQV5 511 aa12.01□□□□□ -0.49
CLDND1-229ENST00000513988 STRN4Q9NRL3 753 aa12.01□□□□□ -0.49
CLDND1-229ENST00000513988 PCNTO95613 3336 aa12.01□□□□□ -0.49
CLDND1-229ENST00000513988 BARGINQ6ZT62 677 aa12□□□□□ -0.49
CLDND1-229ENST00000513988 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
CLDND1-229ENST00000513988 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLDND1-229ENST00000513988 PROM2Q8N271 834 aa11.99□□□□□ -0.49
CLDND1-229ENST00000513988 ADCY9O60503 1353 aa11.99□□□□□ -0.49
CLDND1-229ENST00000513988 ANKRD50Q9ULJ7 1429 aa11.99□□□□□ -0.49
CLDND1-229ENST00000513988 FMN2Q9NZ56 1722 aa11.99□□□□□ -0.49
CLDND1-229ENST00000513988 WDR90Q96KV7 1748 aa11.98□□□□□ -0.49
CLDND1-229ENST00000513988 KIF3CO14782 793 aa11.98□□□□□ -0.49
CLDND1-229ENST00000513988 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
CLDND1-229ENST00000513988 OVOS2A0A0J9YW53 1432 aa11.97□□□□□ -0.49
CLDND1-229ENST00000513988 OVOS2Q6IE36 1432 aa11.97□□□□□ -0.49
CLDND1-229ENST00000513988 NLGN2Q8NFZ4 835 aa11.97□□□□□ -0.49
CLDND1-229ENST00000513988 POLD1P28340 1107 aa11.96□□□□□ -0.49
CLDND1-229ENST00000513988 TXNRD1Q16881 649 aa11.96□□□□□ -0.49
CLDND1-229ENST00000513988 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
CLDND1-229ENST00000513988 DHX57Q6P158 1386 aaKnown RBP11.94□□□□□ -0.5
CLDND1-229ENST00000513988 EVA1CP58658 441 aa11.94□□□□□ -0.5
CLDND1-229ENST00000513988 WAPLQ7Z5K2 1190 aa11.94□□□□□ -0.5
CLDND1-229ENST00000513988 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
CLDND1-229ENST00000513988 SBF2Q86WG5 1849 aa11.94□□□□□ -0.5
CLDND1-229ENST00000513988 RGPD8O14715 1765 aaPredicted RBP11.93□□□□□ -0.5
CLDND1-229ENST00000513988 VGFO15240 615 aaPredicted RBP11.93□□□□□ -0.5
CLDND1-229ENST00000513988 TOMM70O94826 608 aa11.93□□□□□ -0.5
CLDND1-229ENST00000513988 HTRA3P83110 453 aa11.93□□□□□ -0.5
CLDND1-229ENST00000513988 CHRNA2Q15822 529 aa11.93□□□□□ -0.5
CLDND1-229ENST00000513988 PTF1AQ7RTS3 328 aa11.93□□□□□ -0.5
CLDND1-229ENST00000513988 PEAK1Q9H792 1746 aa11.92□□□□□ -0.5
CLDND1-229ENST00000513988 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
CLDND1-229ENST00000513988 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
CLDND1-229ENST00000513988 SSH2Q76I76 1423 aa11.92□□□□□ -0.5
CLDND1-229ENST00000513988 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
CLDND1-229ENST00000513988 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
CLDND1-229ENST00000513988 CHRDL2Q6WN34 429 aa11.91□□□□□ -0.5
CLDND1-229ENST00000513988 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
CLDND1-229ENST00000513988 STK26Q9P289 416 aa11.91□□□□□ -0.5
CLDND1-229ENST00000513988 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms