RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 ITSN1Q15811 1721 aa14.27□□□□□ -0.12
TCOF1-212ENST00000513538 PHRF1Q9P1Y6 1649 aaKnown RBP14.27□□□□□ -0.12
TCOF1-212ENST00000513538 ATP7BP35670 1465 aa14.27□□□□□ -0.12
TCOF1-212ENST00000513538 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
TCOF1-212ENST00000513538 FAM182BQ5T319 152 aa14.26□□□□□ -0.13
TCOF1-212ENST00000513538 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
TCOF1-212ENST00000513538 SPATA31A5Q5VU36 1347 aa14.25□□□□□ -0.13
TCOF1-212ENST00000513538 SPATA31A7Q8IWB4 1347 aa14.25□□□□□ -0.13
TCOF1-212ENST00000513538 A0A0G2JS52 829 aa14.25□□□□□ -0.13
TCOF1-212ENST00000513538 PSDA5PKW4 1024 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-212ENST00000513538 WASLO00401 505 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-212ENST00000513538 MYT1Q01538 1121 aa14.25□□□□□ -0.13
TCOF1-212ENST00000513538 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
TCOF1-212ENST00000513538 TOPAZ1Q8N9V7 1692 aa14.25□□□□□ -0.13
TCOF1-212ENST00000513538 EIF3AQ14152 1382 aaKnown RBP14.24□□□□□ -0.13
TCOF1-212ENST00000513538 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
TCOF1-212ENST00000513538 BAG6P46379 1132 aa14.22□□□□□ -0.13
TCOF1-212ENST00000513538 EN1Q05925 392 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-212ENST00000513538 DISP2A7MBM2 1401 aa14.22□□□□□ -0.13
TCOF1-212ENST00000513538 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
TCOF1-212ENST00000513538 HRCP23327 699 aa14.21□□□□□ -0.13
TCOF1-212ENST00000513538 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
TCOF1-212ENST00000513538 PRDM11Q9NQV5 511 aa14.21□□□□□ -0.13
TCOF1-212ENST00000513538 NRKQ7Z2Y5 1582 aa14.21□□□□□ -0.14
TCOF1-212ENST00000513538 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-212ENST00000513538 SPATA31A1Q5TZJ5 1347 aa14.19□□□□□ -0.14
TCOF1-212ENST00000513538 CHRNA2Q15822 529 aa14.19□□□□□ -0.14
TCOF1-212ENST00000513538 NUDT16Q96DE0 195 aaKnown RBP14.19□□□□□ -0.14
TCOF1-212ENST00000513538 LMO7Q8WWI1 1683 aa14.18□□□□□ -0.14
TCOF1-212ENST00000513538 NUTM2GQ5VZR2 741 aa14.18□□□□□ -0.14
TCOF1-212ENST00000513538 POLR3AO14802 1390 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-212ENST00000513538 KIAA1210Q9ULL0 1709 aa14.18□□□□□ -0.14
TCOF1-212ENST00000513538 RREB1Q92766 1687 aa14.17□□□□□ -0.14
TCOF1-212ENST00000513538 CAMTA1Q9Y6Y1 1673 aa14.17□□□□□ -0.14
TCOF1-212ENST00000513538 R3HDM1Q15032 1099 aaKnown RBP14.16□□□□□ -0.14
TCOF1-212ENST00000513538 EZH2Q15910 746 aaKnown RBP14.16□□□□□ -0.14
TCOF1-212ENST00000513538 CDK19Q9BWU1 502 aa14.16□□□□□ -0.14
TCOF1-212ENST00000513538 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
TCOF1-212ENST00000513538 NUP188Q5SRE5 1749 aa14.15□□□□□ -0.14
TCOF1-212ENST00000513538 ZC3H6P61129 1189 aaKnown RBP14.15□□□□□ -0.14
TCOF1-212ENST00000513538 STRN4Q9NRL3 753 aa14.15□□□□□ -0.14
TCOF1-212ENST00000513538 ACEP12821 1306 aa14.15□□□□□ -0.15
TCOF1-212ENST00000513538 TRIM37O94972 964 aa14.14□□□□□ -0.15
TCOF1-212ENST00000513538 STAC3Q96MF2 364 aa14.14□□□□□ -0.15
TCOF1-212ENST00000513538 CAMKK2Q96RR4 588 aa14.14□□□□□ -0.15
TCOF1-212ENST00000513538 USP19O94966 1318 aa14.13□□□□□ -0.15
TCOF1-212ENST00000513538 NBPF8Q3BBV2 869 aa14.12□□□□□ -0.15
TCOF1-212ENST00000513538 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
TCOF1-212ENST00000513538 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
TCOF1-212ENST00000513538 CPDO75976 1380 aa14.11□□□□□ -0.15
TCOF1-212ENST00000513538 PLEKHG3A1L390 1219 aa14.11□□□□□ -0.15
TCOF1-212ENST00000513538 NBPF1Q3BBV0 1214 aa14.11□□□□□ -0.15
TCOF1-212ENST00000513538 LARP1Q6PKG0 1096 aaKnown RBP14.11□□□□□ -0.15
TCOF1-212ENST00000513538 FAM196AQ6ZSG2 479 aa14.11□□□□□ -0.15
TCOF1-212ENST00000513538 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
TCOF1-212ENST00000513538 BARGINQ6ZT62 677 aa14.1□□□□□ -0.15
TCOF1-212ENST00000513538 QRICH2Q9H0J4 1663 aa14.1□□□□□ -0.15
TCOF1-212ENST00000513538 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
TCOF1-212ENST00000513538 COL5A2P05997 1499 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-212ENST00000513538 PARD3Q8TEW0 1356 aa14.09□□□□□ -0.15
TCOF1-212ENST00000513538 PPIP5K1Q6PFW1 1433 aa14.08□□□□□ -0.15
TCOF1-212ENST00000513538 APBA3O96018 575 aa14.08□□□□□ -0.16
TCOF1-212ENST00000513538 ABTB2Q8N961 1025 aa14.08□□□□□ -0.16
TCOF1-212ENST00000513538 SBF2Q86WG5 1849 aa14.08□□□□□ -0.16
TCOF1-212ENST00000513538 WNK3Q9BYP7 1800 aa14.08□□□□□ -0.16
TCOF1-212ENST00000513538 LRRC37A3O60309 1634 aa14.08□□□□□ -0.16
TCOF1-212ENST00000513538 COL18A1P39060 1754 aa14.07□□□□□ -0.16
TCOF1-212ENST00000513538 SLIT3O75094 1523 aa14.07□□□□□ -0.16
TCOF1-212ENST00000513538 EVA1CP58658 441 aa14.07□□□□□ -0.16
TCOF1-212ENST00000513538 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
TCOF1-212ENST00000513538 PIK3C2AO00443 1686 aa14.07□□□□□ -0.16
TCOF1-212ENST00000513538 GCP02774 474 aa14.05□□□□□ -0.16
TCOF1-212ENST00000513538 PDE3BQ13370 1112 aa14.05□□□□□ -0.16
TCOF1-212ENST00000513538 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
TCOF1-212ENST00000513538 RGPD3A6NKT7 1758 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-212ENST00000513538 RGPD4Q7Z3J3 1758 aa14.04□□□□□ -0.16
TCOF1-212ENST00000513538 CENPJQ9HC77 1338 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-212ENST00000513538 USP6P35125 1406 aa14.04□□□□□ -0.16
TCOF1-212ENST00000513538 SRPK2P78362 688 aaKnown RBP14.03□□□□□ -0.16
TCOF1-212ENST00000513538 NLRP13Q86W25 1043 aa14.03□□□□□ -0.16
TCOF1-212ENST00000513538 CRB1P82279 1406 aa14.03□□□□□ -0.16
TCOF1-212ENST00000513538 RGPD5Q99666 1765 aa14.03□□□□□ -0.16
TCOF1-212ENST00000513538 THRAP3Q9Y2W1 955 aaKnown RBP14.02□□□□□ -0.17
TCOF1-212ENST00000513538 AKAP12Q02952 1782 aa14.01□□□□□ -0.17
TCOF1-212ENST00000513538 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
TCOF1-212ENST00000513538 TRPM1Q7Z4N2 1603 aa14.01□□□□□ -0.17
TCOF1-212ENST00000513538 AATKQ6ZMQ8 1374 aa14.01□□□□□ -0.17
TCOF1-212ENST00000513538 PTF1AQ7RTS3 328 aa14.01□□□□□ -0.17
TCOF1-212ENST00000513538 CABP1Q9NZU7 370 aa14.01□□□□□ -0.17
TCOF1-212ENST00000513538 OVOS2A0A0G2JMS6 1433 aa14□□□□□ -0.17
TCOF1-212ENST00000513538 OVOS2A0A0J9YW53 1432 aa14□□□□□ -0.17
TCOF1-212ENST00000513538 OVOS2Q6IE36 1432 aa14□□□□□ -0.17
TCOF1-212ENST00000513538 BRD4O60885 1362 aaPredicted RBP14□□□□□ -0.17
TCOF1-212ENST00000513538 ZBTB7CA1YPR0 619 aa13.99□□□□□ -0.17
TCOF1-212ENST00000513538 NLRP6P59044 892 aa13.98□□□□□ -0.17
TCOF1-212ENST00000513538 ANO8Q9HCE9 1232 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-212ENST00000513538 AXIN2Q9Y2T1 843 aa13.98□□□□□ -0.17
TCOF1-212ENST00000513538 NFAT5O94916 1531 aa13.97□□□□□ -0.17
TCOF1-212ENST00000513538 NBPF14Q5TI25 921 aa13.97□□□□□ -0.17
TCOF1-212ENST00000513538 CPSF1Q10570 1443 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms