RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ANKARQ7Z5J8 1434 aa14.34□□□□□ -0.11
CCL28-203ENST00000513525 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
CCL28-203ENST00000513525 FOXO3O43524 673 aa14.34□□□□□ -0.11
CCL28-203ENST00000513525 C8orf37Q96NL8 207 aa14.34□□□□□ -0.11
CCL28-203ENST00000513525 PRAM1Q96QH2 718 aa14.34□□□□□ -0.11
CCL28-203ENST00000513525 TRPM3Q9HCF6 1732 aaPredicted RBP14.34□□□□□ -0.11
CCL28-203ENST00000513525 RXRBP28702 533 aa14.33□□□□□ -0.12
CCL28-203ENST00000513525 TULP4Q9NRJ4 1543 aa14.32□□□□□ -0.12
CCL28-203ENST00000513525 ADAMTS2O95450 1211 aa14.31□□□□□ -0.12
CCL28-203ENST00000513525 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
CCL28-203ENST00000513525 ALS2Q96Q42 1657 aa14.31□□□□□ -0.12
CCL28-203ENST00000513525 NGLY1Q96IV0 654 aa14.31□□□□□ -0.12
CCL28-203ENST00000513525 POGKQ9P215 609 aa14.31□□□□□ -0.12
CCL28-203ENST00000513525 SPATA31A3Q5VYP0 1347 aa14.3□□□□□ -0.12
CCL28-203ENST00000513525 NWD2Q9ULI1 1742 aa14.3□□□□□ -0.12
CCL28-203ENST00000513525 XPCQ01831 940 aaPredicted RBP14.3□□□□□ -0.12
CCL28-203ENST00000513525 SAFB2Q14151 953 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCL28-203ENST00000513525 FNBP4Q8N3X1 1017 aaPredicted RBP14.3□□□□□ -0.12
CCL28-203ENST00000513525 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
CCL28-203ENST00000513525 TRAK1Q9UPV9 953 aa14.3□□□□□ -0.12
CCL28-203ENST00000513525 EIF3AQ14152 1382 aaKnown RBP14.3□□□□□ -0.12
CCL28-203ENST00000513525 RGS12O14924 1447 aa14.3□□□□□ -0.12
CCL28-203ENST00000513525 TNS3Q68CZ2 1445 aa14.3□□□□□ -0.12
CCL28-203ENST00000513525 PLCH1Q4KWH8 1693 aa14.29□□□□□ -0.12
CCL28-203ENST00000513525 RBM6P78332 1123 aaKnown RBP14.29□□□□□ -0.12
CCL28-203ENST00000513525 QTRT2Q9H974 415 aaKnown RBP14.29□□□□□ -0.12
CCL28-203ENST00000513525 TOPAZ1Q8N9V7 1692 aa14.29□□□□□ -0.12
CCL28-203ENST00000513525 CRYBG1Q9Y4K1 1723 aa14.29□□□□□ -0.12
CCL28-203ENST00000513525 KRT28Q7Z3Y7 464 aa14.28□□□□□ -0.12
CCL28-203ENST00000513525 ATRNO75882 1429 aa14.27□□□□□ -0.12
CCL28-203ENST00000513525 SBNO1A3KN83 1393 aa14.27□□□□□ -0.12
CCL28-203ENST00000513525 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.12
CCL28-203ENST00000513525 USP21Q9UK80 565 aa14.26□□□□□ -0.13
CCL28-203ENST00000513525 BCL9LQ86UU0 1499 aa14.26□□□□□ -0.13
CCL28-203ENST00000513525 PSME1Q06323 249 aa14.25□□□□□ -0.13
CCL28-203ENST00000513525 SLIT2O94813 1529 aa14.25□□□□□ -0.13
CCL28-203ENST00000513525 TRPM1Q7Z4N2 1603 aa14.25□□□□□ -0.13
CCL28-203ENST00000513525 MINK1Q8N4C8 1332 aaPredicted RBP14.25□□□□□ -0.13
CCL28-203ENST00000513525 TRPC5Q9UL62 973 aaPredicted RBP14.25□□□□□ -0.13
CCL28-203ENST00000513525 ATP7BP35670 1465 aa14.24□□□□□ -0.13
CCL28-203ENST00000513525 QRICH2Q9H0J4 1663 aa14.24□□□□□ -0.13
CCL28-203ENST00000513525 ARHGEF10O15013 1369 aa14.24□□□□□ -0.13
CCL28-203ENST00000513525 WASLO00401 505 aaPredicted RBP14.24□□□□□ -0.13
CCL28-203ENST00000513525 UPF1Q92900 1129 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCL28-203ENST00000513525 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
CCL28-203ENST00000513525 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
CCL28-203ENST00000513525 BRWD3Q6RI45 1802 aa14.23□□□□□ -0.13
CCL28-203ENST00000513525 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
CCL28-203ENST00000513525 NRAPQ86VF7 1730 aa14.23□□□□□ -0.13
CCL28-203ENST00000513525 GLI3P10071 1580 aa14.22□□□□□ -0.13
CCL28-203ENST00000513525 PMFBP1Q8TBY8 1022 aa14.21□□□□□ -0.13
CCL28-203ENST00000513525 COL14A1Q05707 1796 aaKnown RBP14.21□□□□□ -0.13
CCL28-203ENST00000513525 PHRF1Q9P1Y6 1649 aaKnown RBP14.21□□□□□ -0.13
CCL28-203ENST00000513525 EP400Q96L91 3159 aa14.21□□□□□ -0.13
CCL28-203ENST00000513525 GPRASP1Q5JY77 1395 aa14.2□□□□□ -0.14
CCL28-203ENST00000513525 PLSCR2Q9NRY7 297 aa14.19□□□□□ -0.14
CCL28-203ENST00000513525 UNC5CLQ8IV45 518 aa14.18□□□□□ -0.14
CCL28-203ENST00000513525 RALGAPBQ86X10 1494 aa14.17□□□□□ -0.14
CCL28-203ENST00000513525 NBPF1Q3BBV0 1214 aa14.17□□□□□ -0.14
CCL28-203ENST00000513525 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
CCL28-203ENST00000513525 ATAD2Q6PL18 1390 aa14.16□□□□□ -0.14
CCL28-203ENST00000513525 HAP1P54257 671 aaPredicted RBP14.16□□□□□ -0.14
CCL28-203ENST00000513525 CABLES1Q8TDN4 633 aa14.16□□□□□ -0.14
CCL28-203ENST00000513525 NUDT16Q96DE0 195 aaKnown RBP14.16□□□□□ -0.14
CCL28-203ENST00000513525 GJD4Q96KN9 370 aaPredicted RBP14.16□□□□□ -0.14
CCL28-203ENST00000513525 POLR3AO14802 1390 aaPredicted RBP14.16□□□□□ -0.14
CCL28-203ENST00000513525 LMOD2Q6P5Q4 547 aa14.15□□□□□ -0.14
CCL28-203ENST00000513525 NGDNQ8NEJ9 315 aaKnown RBP14.15□□□□□ -0.14
CCL28-203ENST00000513525 L3MBTL2Q969R5 705 aa14.15□□□□□ -0.14
CCL28-203ENST00000513525 CDK19Q9BWU1 502 aa14.15□□□□□ -0.14
CCL28-203ENST00000513525 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
CCL28-203ENST00000513525 CENPJQ9HC77 1338 aaPredicted RBP14.14□□□□□ -0.15
CCL28-203ENST00000513525 AKAP12Q02952 1782 aa14.13□□□□□ -0.15
CCL28-203ENST00000513525 VPS72Q15906 364 aa14.12□□□□□ -0.15
CCL28-203ENST00000513525 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
CCL28-203ENST00000513525 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
CCL28-203ENST00000513525 CCDC61Q9Y6R9 512 aa14.12□□□□□ -0.15
CCL28-203ENST00000513525 PLEKHG3A1L390 1219 aa14.11□□□□□ -0.15
CCL28-203ENST00000513525 NRKQ7Z2Y5 1582 aa14.11□□□□□ -0.15
CCL28-203ENST00000513525 ACEP12821 1306 aa14.1□□□□□ -0.15
CCL28-203ENST00000513525 FAM83GA6ND36 823 aa14.1□□□□□ -0.15
CCL28-203ENST00000513525 PPIP5K1Q6PFW1 1433 aa14.09□□□□□ -0.15
CCL28-203ENST00000513525 PLEKHG5O94827 1062 aa14.09□□□□□ -0.15
CCL28-203ENST00000513525 THSD7AQ9UPZ6 1657 aa14.08□□□□□ -0.15
CCL28-203ENST00000513525 ONECUT3O60422 494 aaPredicted RBP14.08□□□□□ -0.16
CCL28-203ENST00000513525 NBPF8Q3BBV2 869 aa14.08□□□□□ -0.16
CCL28-203ENST00000513525 BRD4O60885 1362 aaPredicted RBP14.08□□□□□ -0.16
CCL28-203ENST00000513525 ROCK2O75116 1388 aaKnown RBP14.08□□□□□ -0.16
CCL28-203ENST00000513525 LMO7Q8WWI1 1683 aa14.08□□□□□ -0.16
CCL28-203ENST00000513525 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
CCL28-203ENST00000513525 PIK3C2AO00443 1686 aa14.06□□□□□ -0.16
CCL28-203ENST00000513525 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
CCL28-203ENST00000513525 SRPK2P78362 688 aaKnown RBP14.06□□□□□ -0.16
CCL28-203ENST00000513525 CCDC125Q86Z20 511 aa14.06□□□□□ -0.16
CCL28-203ENST00000513525 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
CCL28-203ENST00000513525 MON2Q7Z3U7 1717 aa14.06□□□□□ -0.16
CCL28-203ENST00000513525 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
CCL28-203ENST00000513525 RGPD1P0DJD0 1748 aa14.05□□□□□ -0.16
CCL28-203ENST00000513525 SEPT12Q8IYM1 358 aa14.05□□□□□ -0.16
CCL28-203ENST00000513525 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms